You are here

Home

KJC3_012748-T1, KJC3_012748-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012748-T1
Unique NameKJC3_012748-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4482625..4484732+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012748-T1 ID=KJC3_012748-T1|Name=KJC3_012748-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2108bp|location=Sequence derived from alignment at ch8:4482625..4484732+ (Aspergillus niger KJC3)
AGTGAAGCCGCCAAGCCGCCGTGTTCTGGACCCGCGGCTCTTCCAGCATC
CCCGATTCTTCCTCTGCCATCACCACGACGCCTTTCTTTCTCTCCGTTTT
CCGCTGTCTCAGCTTTTGATCTGCACTTTACCCCCCGACCTAGCATTTCA
ATACCTTGTCAGCCGTGCTGGTTCAACCCCCCCGATCGACCGCCCTTTCT
TCTGCCCCTCGGCCAAGCAGCGCACGCTCTTATCAATCCAACCCAAACTT
TCGTCTACCCCGCGCCTTCCGAGACCCTGTTTCATCGCGCGTCCTTACCG
TGATACATCGAACCTAGCGATTTCTTTTCTTTCTCAAAGACATCCTACAT
TAGAACCGAGCGCTTGGAGCGTGTGTGATTCGAAGATGGGCAAGTCGTAA
GTGTTGCGCTTTTCCGATCGCTCCGCATGGGTCTGGCCAGGAACAACAAG
GGAACCGCTTCGGGCAGGGGACAACGGGCACCCATGGATGGTCGCACTCT
AGCGATAGTGACTGCGCTGCGAAGTAATACAGTCCCTGATGGGAGTTGTC
CGATGCTTGTCCATATTGCCTCGCTGGTGCCCTCTTGAGTCCCTCAGAAC
TACCCCTGCTACCCCGGACCTCGTGTGCCCCGCTTGTCCGCATCAAACTA
ATGTATTCACCGGTCTTTCAGGCAGTCGAAGCTCTCCCCCTCCCAGCTGG
AGGAACTCCAAAAAGCCACGCATTTCGATAAGAAGGAGTTGCAACAATGG
TATAAAGGTGTGTGAGAGACATATCATGGGCTTCCGACCGGGTTCCCCCG
GCAATTTTTCCTTCCCTCGTTGTGAAAGCAGCCGCTGACGAATCGCTGCG
GGGCAGGATTCTTGAAGGACTGTCCGTCGGGGACACTCACCAAAGAGGAG
TTTCAGAAAATCTACCGGCAGTTTTTCCCTTTTGGCGACCCATCATCATT
CGCAAATTATGTGTTCCGCGTGTTCGACTCGGATAATAGCGGCATGATCG
ATTTCAAAGAATTCATCTGCGCCCTATCGGTCACGTCGCGCGGCAAGATG
GAGGACAAGCTGGACTGGGCCTTCCAATTGTATGACATTGATGGTGATGG
CAAGATCACATATGACGAAATGCTGGCGATCGTTGAGGCGATCTACAAGA
TGGTAAGTGCTGTGCGCCTAGTCGCCGTTCCATTTTCTGGCCCCCACGCC
GGCTGACCCCCTTCTCTGCATCACAGGTGGGCTCGATGGTGAAACTTCCC
GAGGACGAGGATACACCGGAGAAGCGCGTGCGCAAGATCTTCCGCATGAT
GGATAAGGATGAGAACGGCAGCCTCGATATGGAAGAGTTCAAGGAGGGCA
GCAAGCGGGACGAGACCATCGTCAGCGCGCTGTCGTTGTATGATGGGCTG
GTGTAGGGATAGATCGGCTAACTACTGCTACAACCACAACCACAACCACA
ACCACAACAGCAAGACTGTTACTAGCTGCTGTCTAGTTGGGTGGGCCGGT
GGCATAATGACCATGGTTGCTTCTTCGCATCCTTGATGTGTCTCGGATGG
TGAAACTCTCCTCCTGGTGAATTGGCGCTAACTGTTGACATGCTTTATCT
GCTTCTGCTTCTTTTCGTCCATTTTTGTGACTTGGCTTCTTCTTCTCTTT
TTCTTTCTTTCGTTCTATGTGTTTGCTCATTCTTCAGGATTCCCATTATT
ACTGCTCGTATTGACTTGATAAATGCGCCCAAGCCTGGAATCCACCGCCA
TGCCTTTGCACTAACGCACTGCCGATAGTTGGTCGCGGCTGCTCATAGCG
GTATTTTTGATTGTCCATTTTCTTTCTTAAACTTCTTGCTGAGCTGGAAC
TATGGCCGCTGGAGACAACCTGGGTATGTACAAAGGGTGAGAGGGGAGTC
AATTCCCGGTCGATGAAAATATTTATGATCGCTGTACATAGTCGTTTAGC
TGTTATTTTGACTATTTTTTTTTTTTTTTTTCTTTCTTTCTTTTTTTTGG
GCAGGTTGTTTTGTAGCGGCGTTGCTTCATCGCATGTGTCGGTATGATTG
CAGTGACTATTAGCTAAAGACAGATACAGCTCGTTCATTGAATGGCGGCC
ATGAGCAC
back to top

Coding sequence (CDS) from alignment at ch8:4482625..4484732+

>KJC3_012748-T1 ID=KJC3_012748-T1|Name=KJC3_012748-T1|organism=Aspergillus niger KJC3|type=CDS|length=2292bp|location=Sequence derived from alignment at ch8:4482625..4484732+ (Aspergillus niger KJC3)
ATGGGCAAGTCGCAGTCGAAGCTCTCCCCCTCCCAGCTGGAGGAACTCCA
AAAAGCCACGCATTTCGATAAGAAGGAGTTGCAACAATGGTATAAAGGAT
TCTTGAAGGACTGTCCGTCGGGGACACTCACCAAAGAGGAGTTTCAGAAA
ATCTACCGGCAGTTTTTCCCTTTTGGCGACCCATCATCATTCGCAAATTA
TGTGTTCCGCGTGTTCGACTCGGATAATAGCGGCATGATCGATTTCAAAG
AATTCATCTGCGCCCTATCGGTCACGTCGCGCGGCAAGATGGAGGACAAG
CTGGACTGGGCCTTCCAATTGTATGACATTGATGGTGATGGCAAGATCAC
ATATGACGAAATGCTGGCGATCGTTGAGGCGATCTACAAGATGGTGGGCT
CGATGGTGAAACTTCCCGAGGACGAGGATACACCGGAGAAGCGCGTGCGC
AAGATCTTCCGCATGATGGATAAGGATGAGAACGGCAGCCTCGATATGGA
AGAGTTCAAGGAGGGCAGCAAGCGGGACGAGACCATCGTCAGCGCGCTGT
CGTTGTATGATGGGCTGGTGTAGATGGGCAAGTCGCAGTCGAAGCTCTCC
CCCTCCCAGCTGGAGGAACTCCAAAAAGCCACGCATTTCGATAAGAAGGA
GTTGCAACAATGGTATAAAGGATTCTTGAAGGACTGTCCGTCGGGGACAC
TCACCAAAGAGGAGTTTCAGAAAATCTACCGGCAGTTTTTCCCTTTTGGC
GACCCATCATCATTCGCAAATTATGTGTTCCGCGTGTTCGACTCGGATAA
TAGCGGCATGATCGATTTCAAAGAATTCATCTGCGCCCTATCGGTCACGT
CGCGCGGCAAGATGGAGGACAAGCTGGACTGGGCCTTCCAATTGTATGAC
ATTGATGGTGATGGCAAGATCACATATGACGAAATGCTGGCGATCGTTGA
GGCGATCTACAAGATGGTGGGCTCGATGGTGAAACTTCCCGAGGACGAGG
ATACACCGGAGAAGCGCGTGCGCAAGATCTTCCGCATGATGGATAAGGAT
GAGAACGGCAGCCTCGATATGGAAGAGTTCAAGGAGGGCAGCAAGCGGGA
CGAGACCATCGTCAGCGCGCTGTCGTTGTATGATGGGCTGGTGTAGATGG
GCAAGTCGCAGTCGAAGCTCTCCCCCTCCCAGCTGGAGGAACTCCAAAAA
GCCACGCATTTCGATAAGAAGGAGTTGCAACAATGGTATAAAGGATTCTT
GAAGGACTGTCCGTCGGGGACACTCACCAAAGAGGAGTTTCAGAAAATCT
ACCGGCAGTTTTTCCCTTTTGGCGACCCATCATCATTCGCAAATTATGTG
TTCCGCGTGTTCGACTCGGATAATAGCGGCATGATCGATTTCAAAGAATT
CATCTGCGCCCTATCGGTCACGTCGCGCGGCAAGATGGAGGACAAGCTGG
ACTGGGCCTTCCAATTGTATGACATTGATGGTGATGGCAAGATCACATAT
GACGAAATGCTGGCGATCGTTGAGGCGATCTACAAGATGGTGGGCTCGAT
GGTGAAACTTCCCGAGGACGAGGATACACCGGAGAAGCGCGTGCGCAAGA
TCTTCCGCATGATGGATAAGGATGAGAACGGCAGCCTCGATATGGAAGAG
TTCAAGGAGGGCAGCAAGCGGGACGAGACCATCGTCAGCGCGCTGTCGTT
GTATGATGGGCTGGTGTAGATGGGCAAGTCGCAGTCGAAGCTCTCCCCCT
CCCAGCTGGAGGAACTCCAAAAAGCCACGCATTTCGATAAGAAGGAGTTG
CAACAATGGTATAAAGGATTCTTGAAGGACTGTCCGTCGGGGACACTCAC
CAAAGAGGAGTTTCAGAAAATCTACCGGCAGTTTTTCCCTTTTGGCGACC
CATCATCATTCGCAAATTATGTGTTCCGCGTGTTCGACTCGGATAATAGC
GGCATGATCGATTTCAAAGAATTCATCTGCGCCCTATCGGTCACGTCGCG
CGGCAAGATGGAGGACAAGCTGGACTGGGCCTTCCAATTGTATGACATTG
ATGGTGATGGCAAGATCACATATGACGAAATGCTGGCGATCGTTGAGGCG
ATCTACAAGATGGTGGGCTCGATGGTGAAACTTCCCGAGGACGAGGATAC
ACCGGAGAAGCGCGTGCGCAAGATCTTCCGCATGATGGATAAGGATGAGA
ACGGCAGCCTCGATATGGAAGAGTTCAAGGAGGGCAGCAAGCGGGACGAG
ACCATCGTCAGCGCGCTGTCGTTGTATGATGGGCTGGTGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NCS1KJC3_012748Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012748-T1KJC3_012748-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012748-T1.utr5p1KJC3_012748-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012748-T1.exon1KJC3_012748-T1.exon1Aspergillus niger KJC3exon
KJC3_012748-T1.exon2KJC3_012748-T1.exon2Aspergillus niger KJC3exon
KJC3_012748-T1.exon3KJC3_012748-T1.exon3Aspergillus niger KJC3exon
KJC3_012748-T1.exon4KJC3_012748-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012748-T1.cdsKJC3_012748-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012748-T1.utr3p1KJC3_012748-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264RR2
DBxrefInterPro:IPR011992
DBxrefInterPro:IPR018247
DBxrefInterPro:IPR002048
DBxrefPFAM:PF13833
DBxrefPFAM:PF13499
DBxrefPFAM:PF13405
DBxrefPFAM:PF13202
DBxrefPFAM:PF00036
ProductNeuronal calcium sensor 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4482625..4484732 +
Powered by Drupal