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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4501162..4501951- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012755-T1 ID=KJC3_012755-T1|Name=KJC3_012755-T1|organism=Aspergillus niger KJC3|type=mRNA|length=790bp|location=Sequence derived from alignment at ch8:4501162..4501951- (Aspergillus niger KJC3)
ATGTCGACCTCTGCCCGCCGTCGTCTCATGCGCGACTTCAAGGTGTGTTT
ATGACGAGCATGGTTCTGAACTTGCTTTCTATCCTACGTTTCTACCCTTT
CTCTGTTTACTTTGATCTTGTTTTGTCCTTTTCGTCCTCCCCGTCTGGTT
TTTATACTTAAAGGGCACCTGAAATGTTCTGTCATTGGATACGGTTAGTG
GTTGCGTGAGCTAACCTAACATTCTTCTACGCAGCGTATGCAAACTGACC
CTCCTGCTGGAGTTTCTGCCTCTCCTGTGGCGGACAATGTCATGACCTGG
TAAGCTGATCCAGTCACACCTAATGTCGGCCTTTTGAGTCCCTAACCTTT
GTTACGTCTAGGAACGCCGTCATCATCGGCCCCGCTGATACTCCCTTTGA
AGATGGCACTTTCCGCCTTGTCATGCACTTCGAGGAGCAGTACCCAAACA
AGCCTCCGGGCGTCAAGTTTATCAGTCAGATGTTCCACCCCAACGTCTAC
GGTACGGGCGAGCTCTGTCTGGACATTCTACAGAACCGTTGGAGCCCAAC
CTATGACGTGGCAGCCATCCTGACCAGTATTCAAAGGTACGGACCCTTAC
AATCAGGGTAAAGCTGAAGGAAGATGAAGCACGAAACATGCTAACGAGTG
TTTCACTTGCTTGTAGTCTGTTGAACGATCCCAACACATCATCTCCGGCG
AATGTAGAAGCGTCAAACCTTTACAAAGACAACCGGAAGGAGTACATCAA
GCGCGTGCGCGAGACCGTCGAGAAGAGCTGGGAGGACTAG back to topCoding sequence (CDS) from alignment at ch8:4501162..4501951- >KJC3_012755-T1 ID=KJC3_012755-T1|Name=KJC3_012755-T1|organism=Aspergillus niger KJC3|type=CDS|length=1824bp|location=Sequence derived from alignment at ch8:4501162..4501951- (Aspergillus niger KJC3)
TCTGTTGAACGATCCCAACACATCATCTCCGGCGAATGTAGAAGCGTCAA
ACCTTTACAAAGACAACCGGAAGGAGTACATCAAGCGCGTGCGCGAGACC
GTCGAGAAGAGCTGGGAGGACTAGGAACGCCGTCATCATCGGCCCCGCTG
ATACTCCCTTTGAAGATGGCACTTTCCGCCTTGTCATGCACTTCGAGGAG
CAGTACCCAAACAAGCCTCCGGGCGTCAAGTTTATCAGTCAGATGTTCCA
CCCCAACGTCTACGGTACGGGCGAGCTCTGTCTGGACATTCTACAGAACC
GTTGGAGCCCAACCTATGACGTGGCAGCCATCCTGACCAGTATTCAAAGC
GTATGCAAACTGACCCTCCTGCTGGAGTTTCTGCCTCTCCTGTGGCGGAC
AATGTCATGACCTGATGTCGACCTCTGCCCGCCGTCGTCTCATGCGCGAC
TTCAAGTCTGTTGAACGATCCCAACACATCATCTCCGGCGAATGTAGAAG
CGTCAAACCTTTACAAAGACAACCGGAAGGAGTACATCAAGCGCGTGCGC
GAGACCGTCGAGAAGAGCTGGGAGGACTAGGAACGCCGTCATCATCGGCC
CCGCTGATACTCCCTTTGAAGATGGCACTTTCCGCCTTGTCATGCACTTC
GAGGAGCAGTACCCAAACAAGCCTCCGGGCGTCAAGTTTATCAGTCAGAT
GTTCCACCCCAACGTCTACGGTACGGGCGAGCTCTGTCTGGACATTCTAC
AGAACCGTTGGAGCCCAACCTATGACGTGGCAGCCATCCTGACCAGTATT
CAAAGCGTATGCAAACTGACCCTCCTGCTGGAGTTTCTGCCTCTCCTGTG
GCGGACAATGTCATGACCTGATGTCGACCTCTGCCCGCCGTCGTCTCATG
CGCGACTTCAAGTCTGTTGAACGATCCCAACACATCATCTCCGGCGAATG
TAGAAGCGTCAAACCTTTACAAAGACAACCGGAAGGAGTACATCAAGCGC
GTGCGCGAGACCGTCGAGAAGAGCTGGGAGGACTAGGAACGCCGTCATCA
TCGGCCCCGCTGATACTCCCTTTGAAGATGGCACTTTCCGCCTTGTCATG
CACTTCGAGGAGCAGTACCCAAACAAGCCTCCGGGCGTCAAGTTTATCAG
TCAGATGTTCCACCCCAACGTCTACGGTACGGGCGAGCTCTGTCTGGACA
TTCTACAGAACCGTTGGAGCCCAACCTATGACGTGGCAGCCATCCTGACC
AGTATTCAAAGCGTATGCAAACTGACCCTCCTGCTGGAGTTTCTGCCTCT
CCTGTGGCGGACAATGTCATGACCTGATGTCGACCTCTGCCCGCCGTCGT
CTCATGCGCGACTTCAAGTCTGTTGAACGATCCCAACACATCATCTCCGG
CGAATGTAGAAGCGTCAAACCTTTACAAAGACAACCGGAAGGAGTACATC
AAGCGCGTGCGCGAGACCGTCGAGAAGAGCTGGGAGGACTAGGAACGCCG
TCATCATCGGCCCCGCTGATACTCCCTTTGAAGATGGCACTTTCCGCCTT
GTCATGCACTTCGAGGAGCAGTACCCAAACAAGCCTCCGGGCGTCAAGTT
TATCAGTCAGATGTTCCACCCCAACGTCTACGGTACGGGCGAGCTCTGTC
TGGACATTCTACAGAACCGTTGGAGCCCAACCTATGACGTGGCAGCCATC
CTGACCAGTATTCAAAGCGTATGCAAACTGACCCTCCTGCTGGAGTTTCT
GCCTCTCCTGTGGCGGACAATGTCATGACCTGATGTCGACCTCTGCCCGC
CGTCGTCTCATGCGCGACTTCAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023313 |
| DBxref | InterPro:IPR016135 |
| DBxref | InterPro:IPR000608 |
| DBxref | PFAM:PF00179 |
| Product | Ubiquitin-conjugating enzyme E2 2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4501162..4501951 - |
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