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KJC3_012764-T1, KJC3_012764-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012764-T1
Unique NameKJC3_012764-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4522091..4523178+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012764-T1 ID=KJC3_012764-T1|Name=KJC3_012764-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1088bp|location=Sequence derived from alignment at ch8:4522091..4523178+ (Aspergillus niger KJC3)
GCTTTCTCAGACGTCTCAAGGCCTGAAGCTTCAATCATGTCGAGTAACTA
CAAGCTCTATGAATATGACCCCTCTGTCGGCGCTGCTATTGTCTCTGCCG
GACTGTTCGCCGCAACCTCCATGGTGCATCTTTTCCAGATGATCCGCAGG
CGGACATGGTGCTTTGTACCATTTGTTCTTGGTGGATTCTGTGTGTTCCC
TCATCCCCTCAAGTATTCATCACCTTGCTAATGCCTTAATTCCTTCCAGT
TGAAACATTCGGATACATCGCCCGTTACTTCAGCGCCAGAGAGACCCCAG
ATTGGACCGTGAAGCCCTACGTCGGACAAGAACTGCTGCTTCTTCTAGCT
CCGGCTCTCTTCTCCGCCTCCATCTACATGATCCTGGGCCGAATCATCCG
CCTCCTCGACGGCCACACATACTCGCTAATCCGGCCATCATGGCTGACCA
AGATATTCGTAACCGGCGATGTGCTCTCATTCTTCATCCAAAGTGGCGGC
GGCGGCATAATGGCATCTGCGAAGACCCCCAGCAAGGTCTCCTTGGGCAA
TAACATCATCGTGGTCGGTCTTATCGTTCAGTTGGTCTTTTTCGGCTTCT
TCATCATTGTCACTGTGGTCTTTCATCGCCGTATGGCTGCTTCGCCGACT
GAAGTGTCCGTGATAATCACACAGTGGCACACCTATATGCGCATCTTGTA
TGCGGCTAGTGTTCTCATCATGGTGCGGTCCGTCTATCGTGTGCTGGAGT
ATCTGCAGGGTTCGGAGGGAGGTTTGAAACAAAATGAGATGTTCCTTTAT
ATTTTTGATGCTCTGTTAATGTTTTCGTGTTGTGTTTTGTTCAATGTCAT
GCACCCGAATCGTATACTCTCAGCTCGTCCGGAGGCTTACGACAAGATGA
TGGAAGTGGAGGAGGATCAGGTGGAGATGCTGCGACGAAGACGTTGAGAA
TTTTCTCGCCTTTATTTGTGCTTATCGAATTACGATTCTCTTCTTGCTTT
CTTCCTTTCGTTCCCTGTGTGCCATTATCTTATTTTCAACCTTTGGTTGT
TATGCATACTGTACCATTCTTTCTCCCCCTATAATCCC
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Coding sequence (CDS) from alignment at ch8:4522091..4523178+

>KJC3_012764-T1 ID=KJC3_012764-T1|Name=KJC3_012764-T1|organism=Aspergillus niger KJC3|type=CDS|length=1704bp|location=Sequence derived from alignment at ch8:4522091..4523178+ (Aspergillus niger KJC3)
ATGTCGAGTAACTACAAGCTCTATGAATATGACCCCTCTGTCGGCGCTGC
TATTGTCTCTGCCGGACTGTTCGCCGCAACCTCCATGGTGCATCTTTTCC
AGATGATCCGCAGGCGGACATGGTGCTTTGTACCATTTGTTCTTGGTGGA
TTCTTTGAAACATTCGGATACATCGCCCGTTACTTCAGCGCCAGAGAGAC
CCCAGATTGGACCGTGAAGCCCTACGTCGGACAAGAACTGCTGCTTCTTC
TAGCTCCGGCTCTCTTCTCCGCCTCCATCTACATGATCCTGGGCCGAATC
ATCCGCCTCCTCGACGGCCACACATACTCGCTAATCCGGCCATCATGGCT
GACCAAGATATTCGTAACCGGCGATGTGCTCTCATTCTTCATCCAAAGTG
GCGGCGGCGGCATAATGGCATCTGCGAAGACCCCCAGCAAGGTCTCCTTG
GGCAATAACATCATCGTGGTCGGTCTTATCGTTCAGTTGGTCTTTTTCGG
CTTCTTCATCATTGTCACTGTGGTCTTTCATCGCCGTATGGCTGCTTCGC
CGACTGAAGTGTCCGTGATAATCACACAGTGGCACACCTATATGCGCATC
TTGTATGCGGCTAGTGTTCTCATCATGGTGCGGTCCGTCTATCGTGTGCT
GGAGTATCTGCAGGGTTCGGAGGGAGGTTTGAAACAAAATGAGATGTTCC
TTTATATTTTTGATGCTCTGTTAATGTTTTCGTGTTGTGTTTTGTTCAAT
GTCATGCACCCGAATCGTATACTCTCAGCTCGTCCGGAGGCTTACGACAA
GATGATGGAAGTGGAGGAGGATCAGGTGGAGATGCTGCGACGAAGACGTT
GAATGTCGAGTAACTACAAGCTCTATGAATATGACCCCTCTGTCGGCGCT
GCTATTGTCTCTGCCGGACTGTTCGCCGCAACCTCCATGGTGCATCTTTT
CCAGATGATCCGCAGGCGGACATGGTGCTTTGTACCATTTGTTCTTGGTG
GATTCTTTGAAACATTCGGATACATCGCCCGTTACTTCAGCGCCAGAGAG
ACCCCAGATTGGACCGTGAAGCCCTACGTCGGACAAGAACTGCTGCTTCT
TCTAGCTCCGGCTCTCTTCTCCGCCTCCATCTACATGATCCTGGGCCGAA
TCATCCGCCTCCTCGACGGCCACACATACTCGCTAATCCGGCCATCATGG
CTGACCAAGATATTCGTAACCGGCGATGTGCTCTCATTCTTCATCCAAAG
TGGCGGCGGCGGCATAATGGCATCTGCGAAGACCCCCAGCAAGGTCTCCT
TGGGCAATAACATCATCGTGGTCGGTCTTATCGTTCAGTTGGTCTTTTTC
GGCTTCTTCATCATTGTCACTGTGGTCTTTCATCGCCGTATGGCTGCTTC
GCCGACTGAAGTGTCCGTGATAATCACACAGTGGCACACCTATATGCGCA
TCTTGTATGCGGCTAGTGTTCTCATCATGGTGCGGTCCGTCTATCGTGTG
CTGGAGTATCTGCAGGGTTCGGAGGGAGGTTTGAAACAAAATGAGATGTT
CCTTTATATTTTTGATGCTCTGTTAATGTTTTCGTGTTGTGTTTTGTTCA
ATGTCATGCACCCGAATCGTATACTCTCAGCTCGTCCGGAGGCTTACGAC
AAGATGATGGAAGTGGAGGAGGATCAGGTGGAGATGCTGCGACGAAGACG
TTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012764KJC3_012764Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012764-T1.utr5p1KJC3_012764-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012764-T1.exon1KJC3_012764-T1.exon1Aspergillus niger KJC3exon
KJC3_012764-T1.exon2KJC3_012764-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012764-T1.cdsKJC3_012764-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012764-T1.utr3p1KJC3_012764-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012764-T1KJC3_012764-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007568
DBxrefPFAM:PF04479
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4522091..4523178 +
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