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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4557445..4558864+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012780-T1 ID=KJC3_012780-T1|Name=KJC3_012780-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1420bp|location=Sequence derived from alignment at ch8:4557445..4558864+ (Aspergillus niger KJC3)
CCGTTAAAAGTGGACCAGCATAAGCGCTAAAGGCATGGCATTTCGTTAGC
GAGAAACAGCCGGCCTCGGCTTCCGCCGAACATGCGAATCAGAACTAAAG
TACTCCGTAGTTGCTGCTTTTTAACTAGTCCAACCGTAGCTCCGTCCAAT
CCACCATGTGAAGATATAAAACTCCGGGTTATAGTGGCGTGACCCTCAAT
TTTCCTTTTCCCTTTTCTTTTCTCTTGCTACCCCGTACTCTCTGGGTATT
CTTCGATCTGACGACCACTTGCAGCACAGCACAACACAACACACCACACC
AGACCACAAGGAATACACAAAAGTAGTTAACAATGGGCTCAATCGCCCCT
GATCACCCCATCGAAGTGGACCATGAAGACGACGCAATCAGCCTAGGCAC
CGAATCCTCCACAACATCACTCAGCTCCAGCGTACTCAAATACGAATACA
AGCATGGCCGACGCTACCACGCACACCATCTGGGAAACTACCCGTTTCCC
AACGACCAGCCCGAACAAGACCGACTAGACATGGTGCACCACATCTTCTA
CCGACTCATCAACAACAGACTCTTCCTCGCGCCGATCAACCCGGACGGGA
AACGAATCCTAGACATCGGCACAGGCACAGGCATCTGGGCCATTCAAATG
GGCGACGAGTACCCGAACGTGGAGAAGATCGTGGGAAACGATCTCAGTCC
GATCCAGCCGTCGTGGGTGCCGCCGAATGTGAAGTTTATTGTGGATGATG
TGGAGAAGGAGTGGATGGAGAGCGAGCCATATGATTATATTCATTGTCGG
TATATGGCGGGGTCGATTCGCGATTGGCCGAGGTTGATTCGGCAGTGTTA
TGAGAATTTGAAGCCTGGGGGTTGGTTAGAGTTGCAGGAGAGTGTCAATA
CGTTGTATTCGGAGGATGAGAGTCTAAAGGGGGATAGTTATATGGTGAAG
ATGATGGATGGGTTGAAGGAGGCTTGTCTGAGGATCGGGCAGACGATGGA
TCCGGCGCCGGATTTTGAGAAATGGGTTGCTGAGGCTGGGTTTGGTGCCG
TGCATACGATGAAGTTTAAGTTGCCGATTGGAAGTTGGCCCAAGGATGCG
AGGTTGAAGGAGTGTGGGAGTTTCATGAGGGTCAATTTTGTGGAGGGAGT
GGAGGGGTTCACTGCTGCGTTGTTTGGGGATGTGCTGGGTTGGGAGCAGA
GTGAGATTGAGGAGTTGAATGCTGGGGTGAAGAGGGAGTCGCTGAGGAAG
GATATTCATCCCATTTTTGATGTTTTGGTTGTTGCGGCGCAGAAGCCGAT
GTAGTTGCTGGTACTTGCTTGGGTATATAATGACTAAATATGGTCTGGTA
AAGTGAACTGGAGATAATATTCATCACACATCTGTATCAGGGATATGAAT
GAAAGTAAGACTTCTGTGAG back to topCoding sequence (CDS) from alignment at ch8:4557445..4558864+ >KJC3_012780-T1 ID=KJC3_012780-T1|Name=KJC3_012780-T1|organism=Aspergillus niger KJC3|type=CDS|length=972bp|location=Sequence derived from alignment at ch8:4557445..4558864+ (Aspergillus niger KJC3)
ATGGGCTCAATCGCCCCTGATCACCCCATCGAAGTGGACCATGAAGACGA
CGCAATCAGCCTAGGCACCGAATCCTCCACAACATCACTCAGCTCCAGCG
TACTCAAATACGAATACAAGCATGGCCGACGCTACCACGCACACCATCTG
GGAAACTACCCGTTTCCCAACGACCAGCCCGAACAAGACCGACTAGACAT
GGTGCACCACATCTTCTACCGACTCATCAACAACAGACTCTTCCTCGCGC
CGATCAACCCGGACGGGAAACGAATCCTAGACATCGGCACAGGCACAGGC
ATCTGGGCCATTCAAATGGGCGACGAGTACCCGAACGTGGAGAAGATCGT
GGGAAACGATCTCAGTCCGATCCAGCCGTCGTGGGTGCCGCCGAATGTGA
AGTTTATTGTGGATGATGTGGAGAAGGAGTGGATGGAGAGCGAGCCATAT
GATTATATTCATTGTCGGTATATGGCGGGGTCGATTCGCGATTGGCCGAG
GTTGATTCGGCAGTGTTATGAGAATTTGAAGCCTGGGGGTTGGTTAGAGT
TGCAGGAGAGTGTCAATACGTTGTATTCGGAGGATGAGAGTCTAAAGGGG
GATAGTTATATGGTGAAGATGATGGATGGGTTGAAGGAGGCTTGTCTGAG
GATCGGGCAGACGATGGATCCGGCGCCGGATTTTGAGAAATGGGTTGCTG
AGGCTGGGTTTGGTGCCGTGCATACGATGAAGTTTAAGTTGCCGATTGGA
AGTTGGCCCAAGGATGCGAGGTTGAAGGAGTGTGGGAGTTTCATGAGGGT
CAATTTTGTGGAGGGAGTGGAGGGGTTCACTGCTGCGTTGTTTGGGGATG
TGCTGGGTTGGGAGCAGAGTGAGATTGAGGAGTTGAATGCTGGGGTGAAG
AGGGAGTCGCTGAGGAAGGATATTCATCCCATTTTTGATGTTTTGGTTGT
TGCGGCGCAGAAGCCGATGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012780-T1.utr5p1 | KJC3_012780-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012780-T1.utr3p1 | KJC3_012780-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | PFAM:PF13649 |
| DBxref | PFAM:PF13489 |
| DBxref | PFAM:PF08241 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4557445..4558864 + |
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