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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4560579..4561754+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012782-T1 ID=KJC3_012782-T1|Name=KJC3_012782-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1176bp|location=Sequence derived from alignment at ch8:4560579..4561754+ (Aspergillus niger KJC3)
ATAACTACCACAGCAACCCAAATAACTCAAGCACATCATCCAACGATGTC
TCCCAGAGTCTTCATCACCGGTGCAACCGGCTACGTTGGTGGCCAGACAG
CAGTCACTCTAATTGCTGCGCACCCCGAGTACGACGTCGTGGCACTAGTC
CGAGACCAAGAGCAAGCCGATAAGCTCAAGAGCCGCTTCCCCAACATCAG
TACCGTCCTCGGAACCCTCGATGATGATGCAGTGCTGAAGGAGGAGGCTG
CTAAGGCTGATGTTGTGCTGCGTAAGTCTGCTACTGCCGGCCTCTATAGC
CAGGCTTCACCCAATAGTCATCGACTGACATCTTCATACTTCAACAGAAA
CCGCCAGCTCCGACCACGTCCCTGCTGTGAACTCCCTTCTCAGTGGCCTA
GCAAATGGAAATGGAAGAGGGAGATACATTCACATCTCTGGCACGGGCGT
TCTTAACGATATGTCGACTGGACCGGGAAACCCTACTTCAAAGATCTACG
ACGATGTCAAAGACATTCATGAGATTATTAACCTGCCCGCGGAAGCTCTA
CACCGGAATGTAGATGATGCGGTTATCACAGGTGGAATGCGGCTGAATGT
TCCCACAGCAATTGTATGCCCGCCTACTATCTATGGCGTTGGTGAGGGGC
CGATCAAGAAGCGGAGCATGCAGGTTCCGTTCTTGACTGAAGCGATTCTA
AATCGGGGGAAAGGGTTTACTGTTGGAAAGGGGGAGAATCTCTGGGATTG
TGAGTCTCCTTCTACCTCTTTGAAACTTGGAGACAGACCAACATTTATGC
AGACTGTCACGTCAGCGACGTAGCCAAAGCATTCCTCGTCCTAACTGAAG
AAGCACTGAAGCCCAACGGAGGCTCAGCAACCTGGGGCCCAGAGGGATAC
TATTTTGCCGAGGCCGGCGAGTTCTCATGGAAAGGTGTGAGTGAAAAAGT
CACCCAGATTGCTCATGAGAAGGGAAAGCTTGCTGCTGCGGATATCGAAC
CACTGGCCGTTGAGGACGCTCTTAAATTCCATCCGTGGGCGCCGGTTCTG
TGGGGTGGAAACTGTCGCAGTCGGGCTAGTCGGCTGCGCGTTTTAGGGTG
GAAGCCTGAGGGACCGAGCCTTTGGGAGGCCATTCCTAGTATTGTGGAGT
TCGAGATTCGTGCTCTTGGATTGTGA back to topCoding sequence (CDS) from alignment at ch8:4560579..4561754+ >KJC3_012782-T1 ID=KJC3_012782-T1|Name=KJC3_012782-T1|organism=Aspergillus niger KJC3|type=CDS|length=3006bp|location=Sequence derived from alignment at ch8:4560579..4561754+ (Aspergillus niger KJC3)
ATGTCTCCCAGAGTCTTCATCACCGGTGCAACCGGCTACGTTGGTGGCCA
GACAGCAGTCACTCTAATTGCTGCGCACCCCGAGTACGACGTCGTGGCAC
TAGTCCGAGACCAAGAGCAAGCCGATAAGCTCAAGAGCCGCTTCCCCAAC
ATCAGTACCGTCCTCGGAACCCTCGATGATGATGCAGTGCTGAAGGAGGA
GGCTGCTAAGGCTGATGTTGTGCTGCAAACCGCCAGCTCCGACCACGTCC
CTGCTGTGAACTCCCTTCTCAGTGGCCTAGCAAATGGAAATGGAAGAGGG
AGATACATTCACATCTCTGGCACGGGCGTTCTTAACGATATGTCGACTGG
ACCGGGAAACCCTACTTCAAAGATCTACGACGATGTCAAAGACATTCATG
AGATTATTAACCTGCCCGCGGAAGCTCTACACCGGAATGTAGATGATGCG
GTTATCACAGGTGGAATGCGGCTGAATGTTCCCACAGCAATTGTATGCCC
GCCTACTATCTATGGCGTTGGTGAGGGGCCGATCAAGAAGCGGAGCATGC
AGGTTCCGTTCTTGACTGAAGCGATTCTAAATCGGGGGAAAGGGTTTACT
GTTGGAAAGGGGGAGAATCTCTGGGATTACTGTCACGTCAGCGACGTAGC
CAAAGCATTCCTCGTCCTAACTGAAGAAGCACTGAAGCCCAACGGAGGCT
CAGCAACCTGGGGCCCAGAGGGATACTATTTTGCCGAGGCCGGCGAGTTC
TCATGGAAAGGTGTGAGTGAAAAAGTCACCCAGATTGCTCATGAGAAGGG
AAAGCTTGCTGCTGCGGATATCGAACCACTGGCCGTTGAGGACGCTCTTA
AATTCCATCCGTGGGCGCCGGTTCTGTGGGGTGGAAACTGTCGCAGTCGG
GCTAGTCGGCTGCGCGTTTTAGGGTGGAAGCCTGAGGGACCGAGCCTTTG
GGAGGCCATTCCTAGTATTGTGGAGTTCGAGATTCGTGCTCTTGGATTGT
GAATGTCTCCCAGAGTCTTCATCACCGGTGCAACCGGCTACGTTGGTGGC
CAGACAGCAGTCACTCTAATTGCTGCGCACCCCGAGTACGACGTCGTGGC
ACTAGTCCGAGACCAAGAGCAAGCCGATAAGCTCAAGAGCCGCTTCCCCA
ACATCAGTACCGTCCTCGGAACCCTCGATGATGATGCAGTGCTGAAGGAG
GAGGCTGCTAAGGCTGATGTTGTGCTGCAAACCGCCAGCTCCGACCACGT
CCCTGCTGTGAACTCCCTTCTCAGTGGCCTAGCAAATGGAAATGGAAGAG
GGAGATACATTCACATCTCTGGCACGGGCGTTCTTAACGATATGTCGACT
GGACCGGGAAACCCTACTTCAAAGATCTACGACGATGTCAAAGACATTCA
TGAGATTATTAACCTGCCCGCGGAAGCTCTACACCGGAATGTAGATGATG
CGGTTATCACAGGTGGAATGCGGCTGAATGTTCCCACAGCAATTGTATGC
CCGCCTACTATCTATGGCGTTGGTGAGGGGCCGATCAAGAAGCGGAGCAT
GCAGGTTCCGTTCTTGACTGAAGCGATTCTAAATCGGGGGAAAGGGTTTA
CTGTTGGAAAGGGGGAGAATCTCTGGGATTACTGTCACGTCAGCGACGTA
GCCAAAGCATTCCTCGTCCTAACTGAAGAAGCACTGAAGCCCAACGGAGG
CTCAGCAACCTGGGGCCCAGAGGGATACTATTTTGCCGAGGCCGGCGAGT
TCTCATGGAAAGGTGTGAGTGAAAAAGTCACCCAGATTGCTCATGAGAAG
GGAAAGCTTGCTGCTGCGGATATCGAACCACTGGCCGTTGAGGACGCTCT
TAAATTCCATCCGTGGGCGCCGGTTCTGTGGGGTGGAAACTGTCGCAGTC
GGGCTAGTCGGCTGCGCGTTTTAGGGTGGAAGCCTGAGGGACCGAGCCTT
TGGGAGGCCATTCCTAGTATTGTGGAGTTCGAGATTCGTGCTCTTGGATT
GTGAATGTCTCCCAGAGTCTTCATCACCGGTGCAACCGGCTACGTTGGTG
GCCAGACAGCAGTCACTCTAATTGCTGCGCACCCCGAGTACGACGTCGTG
GCACTAGTCCGAGACCAAGAGCAAGCCGATAAGCTCAAGAGCCGCTTCCC
CAACATCAGTACCGTCCTCGGAACCCTCGATGATGATGCAGTGCTGAAGG
AGGAGGCTGCTAAGGCTGATGTTGTGCTGCAAACCGCCAGCTCCGACCAC
GTCCCTGCTGTGAACTCCCTTCTCAGTGGCCTAGCAAATGGAAATGGAAG
AGGGAGATACATTCACATCTCTGGCACGGGCGTTCTTAACGATATGTCGA
CTGGACCGGGAAACCCTACTTCAAAGATCTACGACGATGTCAAAGACATT
CATGAGATTATTAACCTGCCCGCGGAAGCTCTACACCGGAATGTAGATGA
TGCGGTTATCACAGGTGGAATGCGGCTGAATGTTCCCACAGCAATTGTAT
GCCCGCCTACTATCTATGGCGTTGGTGAGGGGCCGATCAAGAAGCGGAGC
ATGCAGGTTCCGTTCTTGACTGAAGCGATTCTAAATCGGGGGAAAGGGTT
TACTGTTGGAAAGGGGGAGAATCTCTGGGATTACTGTCACGTCAGCGACG
TAGCCAAAGCATTCCTCGTCCTAACTGAAGAAGCACTGAAGCCCAACGGA
GGCTCAGCAACCTGGGGCCCAGAGGGATACTATTTTGCCGAGGCCGGCGA
GTTCTCATGGAAAGGTGTGAGTGAAAAAGTCACCCAGATTGCTCATGAGA
AGGGAAAGCTTGCTGCTGCGGATATCGAACCACTGGCCGTTGAGGACGCT
CTTAAATTCCATCCGTGGGCGCCGGTTCTGTGGGGTGGAAACTGTCGCAG
TCGGGCTAGTCGGCTGCGCGTTTTAGGGTGGAAGCCTGAGGGACCGAGCC
TTTGGGAGGCCATTCCTAGTATTGTGGAGTTCGAGATTCGTGCTCTTGGA
TTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012782-T1.utr5p1 | KJC3_012782-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR016040 |
| DBxref | InterPro:IPR001509 |
| DBxref | PFAM:PF01118 |
| DBxref | PFAM:PF13460 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4560579..4561754 + |
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