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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4573627..4575729+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012787-T1 ID=KJC3_012787-T1|Name=KJC3_012787-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2103bp|location=Sequence derived from alignment at ch8:4573627..4575729+ (Aspergillus niger KJC3)
ATGGATAGCGAAATGGATCCCCCCTTGCACTTTGATAACAGTGGATCGGG
TCCACTTCGTGTTCCGGGCTTCAACGGGATCCCCCTGGAGTATGAGTTCG
AGATCGGCCAGCGCTTCACACACGGGGCACGAGAGAATACGAAAAGGAAA
CCTCTCAGGCTGACCGCACCCGAAGTCAATATGTTGCGACTCATGGAGCG
CATTACTGATATTCAAAACTGGGACCAGGGGGTCTTCGATGAAGATACTC
TCTCCGCATGGCATGCACAGGCAATCTCCTGCGCAAATCTTAACTCTGAC
ATGGATCAGGATGTCGACATGGACCTGGTGACTACGAGAGCATGGCTCTG
GTGTGTTGCAGAGCTACAAGATAAGGCCAGAGCATTTCGTGACACTGGTC
ACGTTCTTGTCCTCAATTCCGACTCTGGCGTTTGTAAAGCCGATCGAGAT
GTGACAGGGGCCCTGGTGCATCAACTCCAGGATGCACTTAGTCAAATTCC
CAAGTGTAGCACGCATGATTTGGTGGACCCGTCATTCCACATGCTTATCT
ATGGTCGCACGACAGTTCTCAGTCATGGTGGTCGGGTTTCTCTTGGAGAG
ATTTCTAACCTGTATCCTCCCTCCGACCGGGGACAGAGGGCACCAGTGCC
AGATCATCCTCTGACTAAGCTTGGACCTTTTCCCCAAGTGTTCAGTCATC
CCAGCGTTAAATCAAAATGCCGACAATACTCCTCCTGCTATCAATGGCTA
CCTTGTGACGTTGAATTCGCCGAGTCTTCGGGAACGGCGGTACGGATAGC
ATCATACATTAATAACCTCCACCCGGTGAATTCTGAAGCATATGCTTCCC
TTGAAAAGCTTATCTCTTTGTCCATAGCGCCTTGGAATGACGTTTTGGTA
AAAGGGGTTCGAGGTCGCACGCCCCGGCGGATCTATACGTACGGTGTCTC
GAATAGTGAAGTACCCCCATGGGCAGAATACCCACCGAAGGACCTACTGC
CAGTTGTGTGGAATCAAGAAATCACTCGACGCGCCTGGTCGCCAGAAGAA
TGGGAAGGCCATTGTGACAAAGTGAAAGACTATCTTCGGTTACCAGACGT
GGATCCGAAATATCGCGTTTTCCCACCAGAGCCCGATGATCCACCCCAGA
CCCAAGACCTTCTGAGTCTCATGACACCAGAAATGTGGGCATCTCCCCAT
AGTGTTGAAAGGATAGTACAGGCGAAGTGGAGACGACTTCATCGGTTCTC
ATATCCCGAGCCAGGTGTCTCCTATACGTATGAAGACTGGAAAGCGGGGA
AGACTGCAAATCCAATCTTCGGCCCATGGGAGTGTGAAAGTAAATATGAG
GTGCCTCATAATCATGATTACTACTTGGTGTCACTGGAGGAGCAATTTCG
GCAACAGGGCCTACAGGTAATTGTTCGGATATTCAGTATCGACCTGACGG
CGAGTGAGCCTCATTATCCCGGGGATCAAGAATTCCATGTGGATGGCATG
CTCAACGAGCATATCGTTGCCACTGCCTACTTCTGCTATAGCTCGGAGAA
TATCACCGAATCCCGCATTTCGTACCAACAGAATGATAACTTGAGATTGC
ATGGTCACCAACCGGATCCCTTGTGCATCTATAAACTTTACGGTATGCCT
CCTTGCCCGGCAGTTGGCGAGGAGCCAAAGGCTATGAACCTTCAAACACT
GGGCTCGGTCGCAGTCACTAGCGGTCGACTTCTCGCTTGGTCTAATACCT
TGCGTTATAAAAGGCATCCTTTCTCCTTGCTTGATCCTTGTCGCCCAGGA
CATCAACGGTGCGTCGTCTTGTGGTTAGTTGATCCCCATTATCGGATCTG
CTCGACTCGAAACGTACCCCCTCAGCAGCATGACTGGTGGCGCAATGCCA
TACTAGCGAAATCGACCTTGTTATCGACCCTTCCCAAAGAATTGGTGGAT
ATGGTAATGAGCGAGACGGGGTCCTACCCAATGCATCTTTCCGAAGCCTT
GGAGCACAAGAAAAGGTCGGACGAAGAGAGGGAGGAGGCTCATCGGGCCC
AGATGTCGGGGTTCAAGAATTATCGGCTCTGGTATGATTTAGAATACTGC
TGA back to topCoding sequence (CDS) from alignment at ch8:4573627..4575729+ >KJC3_012787-T1 ID=KJC3_012787-T1|Name=KJC3_012787-T1|organism=Aspergillus niger KJC3|type=CDS|length=2103bp|location=Sequence derived from alignment at ch8:4573627..4575729+ (Aspergillus niger KJC3)
ATGGATAGCGAAATGGATCCCCCCTTGCACTTTGATAACAGTGGATCGGG
TCCACTTCGTGTTCCGGGCTTCAACGGGATCCCCCTGGAGTATGAGTTCG
AGATCGGCCAGCGCTTCACACACGGGGCACGAGAGAATACGAAAAGGAAA
CCTCTCAGGCTGACCGCACCCGAAGTCAATATGTTGCGACTCATGGAGCG
CATTACTGATATTCAAAACTGGGACCAGGGGGTCTTCGATGAAGATACTC
TCTCCGCATGGCATGCACAGGCAATCTCCTGCGCAAATCTTAACTCTGAC
ATGGATCAGGATGTCGACATGGACCTGGTGACTACGAGAGCATGGCTCTG
GTGTGTTGCAGAGCTACAAGATAAGGCCAGAGCATTTCGTGACACTGGTC
ACGTTCTTGTCCTCAATTCCGACTCTGGCGTTTGTAAAGCCGATCGAGAT
GTGACAGGGGCCCTGGTGCATCAACTCCAGGATGCACTTAGTCAAATTCC
CAAGTGTAGCACGCATGATTTGGTGGACCCGTCATTCCACATGCTTATCT
ATGGTCGCACGACAGTTCTCAGTCATGGTGGTCGGGTTTCTCTTGGAGAG
ATTTCTAACCTGTATCCTCCCTCCGACCGGGGACAGAGGGCACCAGTGCC
AGATCATCCTCTGACTAAGCTTGGACCTTTTCCCCAAGTGTTCAGTCATC
CCAGCGTTAAATCAAAATGCCGACAATACTCCTCCTGCTATCAATGGCTA
CCTTGTGACGTTGAATTCGCCGAGTCTTCGGGAACGGCGGTACGGATAGC
ATCATACATTAATAACCTCCACCCGGTGAATTCTGAAGCATATGCTTCCC
TTGAAAAGCTTATCTCTTTGTCCATAGCGCCTTGGAATGACGTTTTGGTA
AAAGGGGTTCGAGGTCGCACGCCCCGGCGGATCTATACGTACGGTGTCTC
GAATAGTGAAGTACCCCCATGGGCAGAATACCCACCGAAGGACCTACTGC
CAGTTGTGTGGAATCAAGAAATCACTCGACGCGCCTGGTCGCCAGAAGAA
TGGGAAGGCCATTGTGACAAAGTGAAAGACTATCTTCGGTTACCAGACGT
GGATCCGAAATATCGCGTTTTCCCACCAGAGCCCGATGATCCACCCCAGA
CCCAAGACCTTCTGAGTCTCATGACACCAGAAATGTGGGCATCTCCCCAT
AGTGTTGAAAGGATAGTACAGGCGAAGTGGAGACGACTTCATCGGTTCTC
ATATCCCGAGCCAGGTGTCTCCTATACGTATGAAGACTGGAAAGCGGGGA
AGACTGCAAATCCAATCTTCGGCCCATGGGAGTGTGAAAGTAAATATGAG
GTGCCTCATAATCATGATTACTACTTGGTGTCACTGGAGGAGCAATTTCG
GCAACAGGGCCTACAGGTAATTGTTCGGATATTCAGTATCGACCTGACGG
CGAGTGAGCCTCATTATCCCGGGGATCAAGAATTCCATGTGGATGGCATG
CTCAACGAGCATATCGTTGCCACTGCCTACTTCTGCTATAGCTCGGAGAA
TATCACCGAATCCCGCATTTCGTACCAACAGAATGATAACTTGAGATTGC
ATGGTCACCAACCGGATCCCTTGTGCATCTATAAACTTTACGGTATGCCT
CCTTGCCCGGCAGTTGGCGAGGAGCCAAAGGCTATGAACCTTCAAACACT
GGGCTCGGTCGCAGTCACTAGCGGTCGACTTCTCGCTTGGTCTAATACCT
TGCGTTATAAAAGGCATCCTTTCTCCTTGCTTGATCCTTGTCGCCCAGGA
CATCAACGGTGCGTCGTCTTGTGGTTAGTTGATCCCCATTATCGGATCTG
CTCGACTCGAAACGTACCCCCTCAGCAGCATGACTGGTGGCGCAATGCCA
TACTAGCGAAATCGACCTTGTTATCGACCCTTCCCAAAGAATTGGTGGAT
ATGGTAATGAGCGAGACGGGGTCCTACCCAATGCATCTTTCCGAAGCCTT
GGAGCACAAGAAAAGGTCGGACGAAGAGAGGGAGGAGGCTCATCGGGCCC
AGATGTCGGGGTTCAAGAATTATCGGCTCTGGTATGATTTAGAATACTGC
TGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR025340 |
| DBxref | PFAM:PF14033 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4573627..4575729 + |
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