|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4598700..4600518- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012800-T1 ID=KJC3_012800-T1|Name=KJC3_012800-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1819bp|location=Sequence derived from alignment at ch8:4598700..4600518- (Aspergillus niger KJC3)
ATGCAGGCTGCCGCAAAAGCAAGTATTGATGCAGACTATTGGCTTCCTGC
GGCCGTTCGGGGCTTATCTGCGGAGGTTACCAAGTTCCAGGCAGCTACGC
CGGGCTACCCACGGACCCCGGTGCAACTTGACTCCTCACTCTCTGCATCT
TCTTCCATCTCACTTCTTCCCACTTTCCATCTCTCATTGACGTCCACCCA
GTTCCAGACGAAATCAAGCGCAATGGTCCTCCGCCAGGAAAGAAATCCCC
TCACTCCAGAGTTTGACGCTCTCGTCGAGAAATTGCGTGAAGAATGGCAC
ATCCCAGGCCTGAGTATTTCGATCGTGCACGGTTCCAGCACCTACGCAAA
GGTACTTCCGCCGTCCAAGATTGCCATTGACTATCTAACCATATTAACAA
TTATTCCAGGCCTACGGTTATGCTTCCTTTCCATCCACACCCATGACCAC
CACGTCCCTCTTCACAACCTGCAGCACTACCAAAGCCTTCACCGCCGCCG
CAATGTCCCTGGCGATTGACGACAGCCAGTCCACTCCGCACCCAATCTCC
TGGTCAACGCCCGTCTCCTCCATCATCCGTGACGACTTTGTTCTCTCTAC
TCCTTCAGCCACAGCCAACACTACGATTGAAGACATCTTATCTCATCGCA
GTGGGCTCCCGGGCCACTTCTTTGCTATGTCCCTGGCTTATCCGAACGAG
ACTTTGCGCACCGAAGTCCGCAGACTTCGATGGCTACCACTCGCCTTCCC
ACCACGAACAACATTCAACTATTGCAACCATATGTTCATGGCTGCCACAT
ATTTGTTGGAACACATAAATGGCGAAGGTCTCGGAGCGACACTCAAAAGG
CGAATTTGGGACCCACTCGACATGAAAGACACATATTTCTCCACCGCCGA
AGTGCAAAAGTCCCCCACTCTGTCCAAGAGACTAGTCAAGGGCTACACCT
GGAACCCGGAAACACACACCTATCACGAAGAGCCATATATCAACTATGCT
CCTACGACCGGAACTGGAGCGATGGTTTCTAATGTGATGGATTACGCGAA
GTGGCTGCGCGCGATGCTGTATCAGACACCGCCTATCTCAAAAGAAGGGC
ATACCGCACTTCGTATACCCAGAACAGTCATTGCCGATTCGGATTGGAAG
GATATGCTCGCTCCACCGGGGGCATACCATCTCTATACGATGGGGTGGTT
CATTGACTATTACCATGGAGAACAGATATATTGGCACACGGGCAGCTGGG
ATGGATTCGGAATTATGGTGGGCTTTCTGCCTGCAAGAGGTTTTGCGTTT
GCTATGATGGGAAATACCCAAAACGCGAGGGTTGCACAGTTGGAGTTATA
CTTGTATCTCATTGATCAGCTGCTGGGGAAGAGTGGAGCGGACAGGGAAA
CTCATGTGGGGAAGCTAGGGGCAAAGCTTAAGGAGATGGAGCGGAGGTAC
AACGAGAGTGTCGAAAGTGTGGTGGCACGGTTGTATCCAGACCTAAACAC
GAGTTTACCACTTGCGTTGTCGCTGGGAGCGTATACAGGGACATATGCGC
ACCCGGGATATGGGGAGTTGAGGGTGTGTGAGGAGAGCGGCAAGTTGGTT
GTTGATTTGAGGGACCGTGTGCTAAGCAAGTATATGCGTTTTGAGCATGC
TAGTGGGGAATTCTTCGTTGTGAAGTGCTATACCCCTGGGGCTGAGGCTG
TGGGACCAGAGTATTTGAAGGCTGCATTCTATGTTGATTCGGACGGAATA
GTGACGAGCTTGGGGTTGGATTTGGAGTCTACTGTGGGGGAGAAGATCTG
GTTTCAACGAAGAGAGTGA back to topCoding sequence (CDS) from alignment at ch8:4598700..4600518- >KJC3_012800-T1 ID=KJC3_012800-T1|Name=KJC3_012800-T1|organism=Aspergillus niger KJC3|type=CDS|length=3522bp|location=Sequence derived from alignment at ch8:4598700..4600518- (Aspergillus niger KJC3)
GCCTACGGTTATGCTTCCTTTCCATCCACACCCATGACCACCACGTCCCT
CTTCACAACCTGCAGCACTACCAAAGCCTTCACCGCCGCCGCAATGTCCC
TGGCGATTGACGACAGCCAGTCCACTCCGCACCCAATCTCCTGGTCAACG
CCCGTCTCCTCCATCATCCGTGACGACTTTGTTCTCTCTACTCCTTCAGC
CACAGCCAACACTACGATTGAAGACATCTTATCTCATCGCAGTGGGCTCC
CGGGCCACTTCTTTGCTATGTCCCTGGCTTATCCGAACGAGACTTTGCGC
ACCGAAGTCCGCAGACTTCGATGGCTACCACTCGCCTTCCCACCACGAAC
AACATTCAACTATTGCAACCATATGTTCATGGCTGCCACATATTTGTTGG
AACACATAAATGGCGAAGGTCTCGGAGCGACACTCAAAAGGCGAATTTGG
GACCCACTCGACATGAAAGACACATATTTCTCCACCGCCGAAGTGCAAAA
GTCCCCCACTCTGTCCAAGAGACTAGTCAAGGGCTACACCTGGAACCCGG
AAACACACACCTATCACGAAGAGCCATATATCAACTATGCTCCTACGACC
GGAACTGGAGCGATGGTTTCTAATGTGATGGATTACGCGAAGTGGCTGCG
CGCGATGCTGTATCAGACACCGCCTATCTCAAAAGAAGGGCATACCGCAC
TTCGTATACCCAGAACAGTCATTGCCGATTCGGATTGGAAGGATATGCTC
GCTCCACCGGGGGCATACCATCTCTATACGATGGGGTGGTTCATTGACTA
TTACCATGGAGAACAGATATATTGGCACACGGGCAGCTGGGATGGATTCG
GAATTATGGTGGGCTTTCTGCCTGCAAGAGGTTTTGCGTTTGCTATGATG
GGAAATACCCAAAACGCGAGGGTTGCACAGTTGGAGTTATACTTGTATCT
CATTGATCAGCTGCTGGGGAAGAGTGGAGCGGACAGGGAAACTCATGTGG
GGAAGCTAGGGGCAAAGCTTAAGGAGATGGAGCGGAGGTACAACGAGAGT
GTCGAAAGTGTGGTGGCACGGTTGTATCCAGACCTAAACACGAGTTTACC
ACTTGCGTTGTCGCTGGGAGCGTATACAGGGACATATGCGCACCCGGGAT
ATGGGGAGTTGAGGGTGTGTGAGGAGAGCGGCAAGTTGGTTGTTGATTTG
AGGGACCGTGTGCTAAGCAAGTATATGCGTTTTGAGCATGCTAGTGGGGA
ATTCTTCGTTGTGAAGTGCTATACCCCTGGGGCTGAGGCTGTGGGACCAG
AGTATTTGAAGGCTGCATTCTATGTTGATTCGGACGGAATAGTGACGAGC
TTGGGGTTGGATTTGGAGTCTACTGTGGGGGAGAAGATCTGGTTTCAACG
AAGAGAGTGAATGCAGGCTGCCGCAAAAGCAAGTATTGATGCAGACTATT
GGCTTCCTGCGGCCGTTCGGGGCTTATCTGCGGAGGTTACCAAGTTCCAG
GCAGCTACGCCGGGCTACCCACGGACCCCGGTGCAACTTGACTCCTCACT
CTCTGCATCTTCTTCCATCTCACTTCTTCCCACTTTCCATCTCTCATTGA
CGTCCACCCAGTTCCAGACGAAATCAAGCGCAATGGTCCTCCGCCAGGAA
AGAAATCCCCTCACTCCAGAGTTTGACGCTCTCGTCGAGAAATTGCGTGA
AGAATGGCACATCCCAGGCCTGAGTATTTCGATCGTGCACGGTTCCAGCA
CCTACGCAAAGGCCTACGGTTATGCTTCCTTTCCATCCACACCCATGACC
ACCACGTCCCTCTTCACAACCTGCAGCACTACCAAAGCCTTCACCGCCGC
CGCAATGTCCCTGGCGATTGACGACAGCCAGTCCACTCCGCACCCAATCT
CCTGGTCAACGCCCGTCTCCTCCATCATCCGTGACGACTTTGTTCTCTCT
ACTCCTTCAGCCACAGCCAACACTACGATTGAAGACATCTTATCTCATCG
CAGTGGGCTCCCGGGCCACTTCTTTGCTATGTCCCTGGCTTATCCGAACG
AGACTTTGCGCACCGAAGTCCGCAGACTTCGATGGCTACCACTCGCCTTC
CCACCACGAACAACATTCAACTATTGCAACCATATGTTCATGGCTGCCAC
ATATTTGTTGGAACACATAAATGGCGAAGGTCTCGGAGCGACACTCAAAA
GGCGAATTTGGGACCCACTCGACATGAAAGACACATATTTCTCCACCGCC
GAAGTGCAAAAGTCCCCCACTCTGTCCAAGAGACTAGTCAAGGGCTACAC
CTGGAACCCGGAAACACACACCTATCACGAAGAGCCATATATCAACTATG
CTCCTACGACCGGAACTGGAGCGATGGTTTCTAATGTGATGGATTACGCG
AAGTGGCTGCGCGCGATGCTGTATCAGACACCGCCTATCTCAAAAGAAGG
GCATACCGCACTTCGTATACCCAGAACAGTCATTGCCGATTCGGATTGGA
AGGATATGCTCGCTCCACCGGGGGCATACCATCTCTATACGATGGGGTGG
TTCATTGACTATTACCATGGAGAACAGATATATTGGCACACGGGCAGCTG
GGATGGATTCGGAATTATGGTGGGCTTTCTGCCTGCAAGAGGTTTTGCGT
TTGCTATGATGGGAAATACCCAAAACGCGAGGGTTGCACAGTTGGAGTTA
TACTTGTATCTCATTGATCAGCTGCTGGGGAAGAGTGGAGCGGACAGGGA
AACTCATGTGGGGAAGCTAGGGGCAAAGCTTAAGGAGATGGAGCGGAGGT
ACAACGAGAGTGTCGAAAGTGTGGTGGCACGGTTGTATCCAGACCTAAAC
ACGAGTTTACCACTTGCGTTGTCGCTGGGAGCGTATACAGGGACATATGC
GCACCCGGGATATGGGGAGTTGAGGGTGTGTGAGGAGAGCGGCAAGTTGG
TTGTTGATTTGAGGGACCGTGTGCTAAGCAAGTATATGCGTTTTGAGCAT
GCTAGTGGGGAATTCTTCGTTGTGAAGTGCTATACCCCTGGGGCTGAGGC
TGTGGGACCAGAGTATTTGAAGGCTGCATTCTATGTTGATTCGGACGGAA
TAGTGACGAGCTTGGGGTTGGATTTGGAGTCTACTGTGGGGGAGAAGATC
TGGTTTCAACGAAGAGAGTGAATGCAGGCTGCCGCAAAAGCAAGTATTGA
TGCAGACTATTGGCTTCCTGCGGCCGTTCGGGGCTTATCTGCGGAGGTTA
CCAAGTTCCAGGCAGCTACGCCGGGCTACCCACGGACCCCGGTGCAACTT
GACTCCTCACTCTCTGCATCTTCTTCCATCTCACTTCTTCCCACTTTCCA
TCTCTCATTGACGTCCACCCAGTTCCAGACGAAATCAAGCGCAATGGTCC
TCCGCCAGGAAAGAAATCCCCTCACTCCAGAGTTTGACGCTCTCGTCGAG
AAATTGCGTGAAGAATGGCACATCCCAGGCCTGAGTATTTCGATCGTGCA
CGGTTCCAGCACCTACGCAAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0026262 |
| DBxref | InterPro:IPR021860 |
| DBxref | InterPro:IPR001466 |
| DBxref | InterPro:IPR012338 |
| DBxref | PFAM:PF11954 |
| DBxref | PFAM:PF00144 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4598700..4600518 - |
|
