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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4648506..4649412- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012817-T1 ID=KJC3_012817-T1|Name=KJC3_012817-T1|organism=Aspergillus niger KJC3|type=mRNA|length=907bp|location=Sequence derived from alignment at ch8:4648506..4649412- (Aspergillus niger KJC3)
ATGATGCTGGCGAACTCTCTTGTCATTCTGGCCGCCATTGTTGCGAGCAT
CCTTACTCCAGTCTTGGGGGCCCCGGCTCTCGATGTCGGAGTCACCGAAC
CTCAGGCTGAGCCCAAATATGTCTTCGCTCATTTCATGGTCGGTAGACAT
TTACTCTACTGAGCTTCCGGACAACCAATGCTAACCATGATAGGTCGGCA
TCGTTGAAAACTATCAGCTGGAAGACTGGATCACTGACATGAAAGCCGCA
CAAGCCATCGGAATCGATGCATTCGCACTCAATTGTGCCAGTATTGACAA
GTACACCCCTACACAGCTCGCTTTAGCATACCAAGCTGCTCAACAAGCAA
ATTTCAAAGTATTCATCTCTTTCGACTTCGCCTACTGGAGCAACGGGGAC
ACGGGCAAGATCACTGCCTACATGCAACAATACGCGAACCACCCAGCGCA
GATGCAATACCGCGGCGGCGCAGTTGTGAGCACCTTTGTCGGGGACAGCT
TCAACTGGAGCCCTGTCAAGCAAGCTACCTCACACCCTATCCATGCCGTG
CCTAACCTTCAAGATCCTGCTGCTGCGTCCAGCAATTCTCAGAGGGGCGC
AGACGGGGCATTCTCATGGTACGCATGGCCGACAGACGGGGGAAACAGCA
TAATAAAAGGGCCAATGACAACAATCTGGGACGACCGGTACATCAAAGAT
CTCGCAGGCACGACATATATGGCGCGTGAGTTGCTCAACAGAATACACTG
TGCCATGCTAAGATCCGCTAGCGGTCTCACCATGGTTTGCTACGCACTTC
AACAGCAAGAACTGGGTGTTCATATGCGAGAACCTGCCCACCCTGCGTTG
GGAGCAGATGCTGAGTCTCAAGCCAAGCTTGGTCGAAATCATTTCTTGGA
ACGGTAA back to topCoding sequence (CDS) from alignment at ch8:4648506..4649412- >KJC3_012817-T1 ID=KJC3_012817-T1|Name=KJC3_012817-T1|organism=Aspergillus niger KJC3|type=CDS|length=1704bp|location=Sequence derived from alignment at ch8:4648506..4649412- (Aspergillus niger KJC3)
GTCGGCATCGTTGAAAACTATCAGCTGGAAGACTGGATCACTGACATGAA
AGCCGCACAAGCCATCGGAATCGATGCATTCGCACTCAATTGTGCCAGTA
TTGACAAGTACACCCCTACACAGCTCGCTTTAGCATACCAAGCTGCTCAA
CAAGCAAATTTCAAAGTATTCATCTCTTTCGACTTCGCCTACTGGAGCAA
CGGGGACACGGGCAAGATCACTGCCTACATGCAACAATACGCGAACCACC
CAGCGCAGATGCAATACCGCGGCGGCGCAGTTGTGAGCACCTTTGTCGGG
GACAGCTTCAACTGGAGCCCTGTCAAGCAAGCTACCTCACACCCTATCCA
TGCCGTGCCTAACCTTCAAGATCCTGCTGCTGCGTCCAGCAATTCTCAGA
GGGGCGCAGACGGGGCATTCTCATGGTACGCATGGCCGACAGACGGGGGA
AACAGCATAATAAAAGGGCCAATGACAACAATCTGGGACGACCGGTACAT
CAAAGATCTCGCAGGCACGACATATATGGCGCGTGAGTTGCTCAACAGAA
TACACTGTGCCATGCTAAGATCCGCTAGCGGTCTCACCATGGTTTGCTAC
GCACTTCAACAGCAAGAACTGGGTGTTCATATGCGAGAACCTGCCCACCC
TGCGTTGGGAGCAGATGCTGAGTCTCAAGCCAAGCTTGGTCGAAATCATT
TCTTGGAACGGTAAATGATGCTGGCGAACTCTCTTGTCATTCTGGCCGCC
ATTGTTGCGAGCATCCTTACTCCAGTCTTGGGGGCCCCGGCTCTCGATGT
CGGAGTCACCGAACCTCAGGCTGAGCCCAAATATGTCTTCGCTCATTTCA
TGGTCGGCATCGTTGAAAACTATCAGCTGGAAGACTGGATCACTGACATG
AAAGCCGCACAAGCCATCGGAATCGATGCATTCGCACTCAATTGTGCCAG
TATTGACAAGTACACCCCTACACAGCTCGCTTTAGCATACCAAGCTGCTC
AACAAGCAAATTTCAAAGTATTCATCTCTTTCGACTTCGCCTACTGGAGC
AACGGGGACACGGGCAAGATCACTGCCTACATGCAACAATACGCGAACCA
CCCAGCGCAGATGCAATACCGCGGCGGCGCAGTTGTGAGCACCTTTGTCG
GGGACAGCTTCAACTGGAGCCCTGTCAAGCAAGCTACCTCACACCCTATC
CATGCCGTGCCTAACCTTCAAGATCCTGCTGCTGCGTCCAGCAATTCTCA
GAGGGGCGCAGACGGGGCATTCTCATGGTACGCATGGCCGACAGACGGGG
GAAACAGCATAATAAAAGGGCCAATGACAACAATCTGGGACGACCGGTAC
ATCAAAGATCTCGCAGGCACGACATATATGGCGCGTGAGTTGCTCAACAG
AATACACTGTGCCATGCTAAGATCCGCTAGCGGTCTCACCATGGTTTGCT
ACGCACTTCAACAGCAAGAACTGGGTGTTCATATGCGAGAACCTGCCCAC
CCTGCGTTGGGAGCAGATGCTGAGTCTCAAGCCAAGCTTGGTCGAAATCA
TTTCTTGGAACGGTAAATGATGCTGGCGAACTCTCTTGTCATTCTGGCCG
CCATTGTTGCGAGCATCCTTACTCCAGTCTTGGGGGCCCCGGCTCTCGAT
GTCGGAGTCACCGAACCTCAGGCTGAGCCCAAATATGTCTTCGCTCATTT
CATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.10 |
| Note | SECRETED:SignalP(1-23) |
| Note | CAZy:GH71 |
| DBxref | InterPro:IPR005197 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4648506..4649412 - |
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