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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4843487..4844812- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012884-T1 ID=KJC3_012884-T1|Name=KJC3_012884-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1326bp|location=Sequence derived from alignment at ch8:4843487..4844812- (Aspergillus niger KJC3)
TGCGTCCTCATACCAAGTTCTTGTTAGCTTCCTACATACTCCTTGATATC
TCCACCATTGGATCTACAACAGTATGGCCTTTGCGCGTCGGCTCGCCATC
CTCCCCGGTGGCCTAGGTAGGCATTGACTCCACCCCCGTTACAGTCCCGT
GCTGGGTATTGACTGCCTGTCCCCGAGTAAGGCGGCCTGGGCTCGAGTAT
CGGCAAGAAGCTCCGCCAACAAGGTGCTCGGCTAGCTATTCTGTATGCCC
CCTTCGAGGCTGCCCGACGCGATGAGCTGCTAGAGGCAGGTTACGGCGAG
CTGCCCGCACGTGAGGAAATCAGAACGTATGAATGCGACATCACAAACCC
CGAGGCTGTCCAGTCCGTCTTCACCACCCTGAAGGAGGAGGTTCTCACCC
CATCATCGACGACGCAGTCTGCCCGTGCCTTTCCCAGTATCTTGATTAAT
ACGGCGGGCTATGTGTCGCTCAGTGATTTGGAGCTCACCCCGCCGGAAGA
AACGCTAAAGCATCTGCATACCAATGTCCTGGGCCCCATGCTGTGCTCGC
AGGCCTTTGCGCGCTTGTACTTAGCCGCCGCTGAGGTAGCTCATTCGTCA
CCCAACCCGCCGCCTCCGGGTCGCATCGTCAACCTGGCCTCTCAAGCCGC
GCATGTGGCCCTCCATCGCCATGGAGCCTATTGTGCCTCCAAGGCAGCCC
TGTTGGGGCTAACGCGCAGTATGGCTTCTGAATGGGGCGGCCGCGGCATT
ACGGCGAACAGCGTGTCTCCGACGGTGGCCTGGACCGCTCTGGGACAGAA
GGCTTGGGGGCAGGATGACGTGCGGGAGGCTTTCTTGAAAACGATCCCGA
CGGGCAAGTTTGCGCAGCCAGACGAGGTTGCGGATGCGGTTCTCTTTCTC
TGTCAGGTATGTAATTGAACTATCGACCGAGGAGTGTTTGCGTTACATTC
TAATTGGCGAAACAGGACTCAAGTGGTATGATCAACGGAGCGGACATTCG
CGTAGACGGTGGCTTTACCATCAGGTAATCTCTGGACCGGTATTGAACCT
TTACAAGTTGAGAGATCCACTATGTGATAGATGACTGATAGTTGATATAC
TCCCTGGCTCTATGGTGCCCCCAAAGGTAGTAGTCACGGCTGCCAGGACA
GTGTAGTAGCTGATGGGCAGAGGAGGCCTTTGGTATCTGGTGCTATATTG
AGCATAATCATGAATAATTCGGACATAGAGGTACCTATAAAACATGCTTG
AAGACCCCTTTCATACATGCGAGGAGCGCTATGAAGTTTACTCTTCTCCA
TTATCTAGCCATGGCGGAAAAAAGTG back to topCoding sequence (CDS) from alignment at ch8:4843487..4844812- >KJC3_012884-T1 ID=KJC3_012884-T1|Name=KJC3_012884-T1|organism=Aspergillus niger KJC3|type=CDS|length=2493bp|location=Sequence derived from alignment at ch8:4843487..4844812- (Aspergillus niger KJC3)
GACTCAAGTGGTATGATCAACGGAGCGGACATTCGCGTAGACGGTGGCTT
TACCATCAGGTAAGCGGCCTGGGCTCGAGTATCGGCAAGAAGCTCCGCCA
ACAAGGTGCTCGGCTAGCTATTCTGTATGCCCCCTTCGAGGCTGCCCGAC
GCGATGAGCTGCTAGAGGCAGGTTACGGCGAGCTGCCCGCACGTGAGGAA
ATCAGAACGTATGAATGCGACATCACAAACCCCGAGGCTGTCCAGTCCGT
CTTCACCACCCTGAAGGAGGAGGTTCTCACCCCATCATCGACGACGCAGT
CTGCCCGTGCCTTTCCCAGTATCTTGATTAATACGGCGGGCTATGTGTCG
CTCAGTGATTTGGAGCTCACCCCGCCGGAAGAAACGCTAAAGCATCTGCA
TACCAATGTCCTGGGCCCCATGCTGTGCTCGCAGGCCTTTGCGCGCTTGT
ACTTAGCCGCCGCTGAGGTAGCTCATTCGTCACCCAACCCGCCGCCTCCG
GGTCGCATCGTCAACCTGGCCTCTCAAGCCGCGCATGTGGCCCTCCATCG
CCATGGAGCCTATTGTGCCTCCAAGGCAGCCCTGTTGGGGCTAACGCGCA
GTATGGCTTCTGAATGGGGCGGCCGCGGCATTACGGCGAACAGCGTGTCT
CCGACGGTGGCCTGGACCGCTCTGGGACAGAAGGCTTGGGGGCAGGATGA
CGTGCGGGAGGCTTTCTTGAAAACGATCCCGACGGGCAAGTTTGCGCAGC
CAGACGAGGTTGCGGATGCGGTTCTCTTTCTCTGTCAGATGGCCTTTGCG
CGTCGGCTCGCCATCCTCCCCGGTGGCCTAGGACTCAAGTGGTATGATCA
ACGGAGCGGACATTCGCGTAGACGGTGGCTTTACCATCAGGTAAGCGGCC
TGGGCTCGAGTATCGGCAAGAAGCTCCGCCAACAAGGTGCTCGGCTAGCT
ATTCTGTATGCCCCCTTCGAGGCTGCCCGACGCGATGAGCTGCTAGAGGC
AGGTTACGGCGAGCTGCCCGCACGTGAGGAAATCAGAACGTATGAATGCG
ACATCACAAACCCCGAGGCTGTCCAGTCCGTCTTCACCACCCTGAAGGAG
GAGGTTCTCACCCCATCATCGACGACGCAGTCTGCCCGTGCCTTTCCCAG
TATCTTGATTAATACGGCGGGCTATGTGTCGCTCAGTGATTTGGAGCTCA
CCCCGCCGGAAGAAACGCTAAAGCATCTGCATACCAATGTCCTGGGCCCC
ATGCTGTGCTCGCAGGCCTTTGCGCGCTTGTACTTAGCCGCCGCTGAGGT
AGCTCATTCGTCACCCAACCCGCCGCCTCCGGGTCGCATCGTCAACCTGG
CCTCTCAAGCCGCGCATGTGGCCCTCCATCGCCATGGAGCCTATTGTGCC
TCCAAGGCAGCCCTGTTGGGGCTAACGCGCAGTATGGCTTCTGAATGGGG
CGGCCGCGGCATTACGGCGAACAGCGTGTCTCCGACGGTGGCCTGGACCG
CTCTGGGACAGAAGGCTTGGGGGCAGGATGACGTGCGGGAGGCTTTCTTG
AAAACGATCCCGACGGGCAAGTTTGCGCAGCCAGACGAGGTTGCGGATGC
GGTTCTCTTTCTCTGTCAGATGGCCTTTGCGCGTCGGCTCGCCATCCTCC
CCGGTGGCCTAGGACTCAAGTGGTATGATCAACGGAGCGGACATTCGCGT
AGACGGTGGCTTTACCATCAGGTAAGCGGCCTGGGCTCGAGTATCGGCAA
GAAGCTCCGCCAACAAGGTGCTCGGCTAGCTATTCTGTATGCCCCCTTCG
AGGCTGCCCGACGCGATGAGCTGCTAGAGGCAGGTTACGGCGAGCTGCCC
GCACGTGAGGAAATCAGAACGTATGAATGCGACATCACAAACCCCGAGGC
TGTCCAGTCCGTCTTCACCACCCTGAAGGAGGAGGTTCTCACCCCATCAT
CGACGACGCAGTCTGCCCGTGCCTTTCCCAGTATCTTGATTAATACGGCG
GGCTATGTGTCGCTCAGTGATTTGGAGCTCACCCCGCCGGAAGAAACGCT
AAAGCATCTGCATACCAATGTCCTGGGCCCCATGCTGTGCTCGCAGGCCT
TTGCGCGCTTGTACTTAGCCGCCGCTGAGGTAGCTCATTCGTCACCCAAC
CCGCCGCCTCCGGGTCGCATCGTCAACCTGGCCTCTCAAGCCGCGCATGT
GGCCCTCCATCGCCATGGAGCCTATTGTGCCTCCAAGGCAGCCCTGTTGG
GGCTAACGCGCAGTATGGCTTCTGAATGGGGCGGCCGCGGCATTACGGCG
AACAGCGTGTCTCCGACGGTGGCCTGGACCGCTCTGGGACAGAAGGCTTG
GGGGCAGGATGACGTGCGGGAGGCTTTCTTGAAAACGATCCCGACGGGCA
AGTTTGCGCAGCCAGACGAGGTTGCGGATGCGGTTCTCTTTCTCTGTCAG
ATGGCCTTTGCGCGTCGGCTCGCCATCCTCCCCGGTGGCCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012884-T1.utr3p1 | KJC3_012884-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012884-T1.utr5p1 | KJC3_012884-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4843487..4844812 - |
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