You are here

Home

KJC3_012947-T1, KJC3_012947-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012947-T1
Unique NameKJC3_012947-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC12F:44113..46333-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012947-T1 ID=KJC3_012947-T1|Name=KJC3_012947-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2221bp|location=Sequence derived from alignment at JC12F:44113..46333- (Aspergillus niger KJC3)
ATCTGGGTTTGGCCAACTGCTAACTGCATGCCAGCTGCCACAGCACAGCG
TTCGGTCCTTGAGTTTGGTTTCCACCAGATTATATGCCGCCCTGTTCCCG
CGGCTTCATCGAACCATCACCTTCCGTGCGAGGAATGAATGGGCTTTGAA
CATTCTCGATGTCCATCCCTTTTTTCGGGACCACTCCGGCTCCCGCGCCG
GCGAAATCCTCCAGCATGCCCGGCAGATAAGGTTCAGCGCTCCTATTCAC
ATTGCTAGGTTCCACCGTTGTGTATACAACAGTCACTTTCTCCTACCGGC
CTCGTCCCACAACCGACCTACACTTGGAAGCCCGCACGAGTCGACAGCCC
ATCAAGCCTTTCTCAATGATTTGTCTTATCAGATAGATCAGGTCTTTGCG
GGACTGGAGACCGTCTCCATCCGCTCGTTTCAGTATGTATGAAAGGCATG
AGCCGCTGGACTTGCAACTGACCTGTCGCATGTGGTGCGTAGGGACCTGC
CTTCCAGCCGGAATTCTGGACACCAACGGATACCTGGTCCGCCACCAGCA
ACGGATCCATTCGCTTTGCTTGATCACCGACGGCACCTGTCCTCATGCCG
GCCGTCGTCTAGAGGGCCTGTCGAGTTTGACGGCACTGACTGACCTGGAA
TGGGAAGGCATCCAGCATCCATTCGAAATGCGCACCTTGTGCGAGTGTCT
CCGACAAAATCATCGGCGGCTGAAGGCGGTATCCATTGGACTTCTGTTGG
ATCCGAACGTACCCACATCCCATGAGGATATTCTGGAGGTCTTCTGGCCA
CCTCGAGCGCAGGACGACTGCACGCCGGGCGAGCGGGAATGGTTCCCATC
TCTCACATCCTTGACATTCTCTCGCGTCCCGTTCCCCGACAGTCTGCTGC
CGGGCGGCCAACCGTCACCGTTCCGCGCGCTCAAGGCACTAACGATCCGA
GACTGTCCCAACGAGCAGCGCTTCCTGCAGCTGTTGGCGCGAGCCAAGGA
TCCGTTGACCCTCCAGCACTTCGAGATCTGCAGTGACTACCTGCGCGATT
CAGAGGACCGATTGGCGTCCATTGCGATCGTCGAATTTCTACTCTCATTT
CGTGGCTTGCGACGGCTGTACCTGAAGGTGGCCAACTTTCCCCGGTTCCT
GCCGGGTCTTGGTGATGCCATCAAACATCACCAAGCCACGCTCCACGGTC
TGGTTTTTCACGAGCGTCGGCTGATGCCAATCGACGCTGAAAGGCTGTTT
GAAGATCTTCGGGATGTGAATATGGCATCCCCCAATATTCCGCAAATTCT
ACGACATAGTTCCCCCGCCGCTCTTGGCCTCTGTCTTCGCCCGGCCAGCG
CGGTAAGTGTATCGTTAGCACCCATCCCCACGGCTATATGAGCTGACTCA
CTGTAGCGCGGTCTTCTCTCAGACATCCCGGAACGCTCGACAATAAGATT
ACTCCACCTCCGGTTAAGCGGAGAGGAGAGGAACCATCGGCATCTCCGCA
GAGAGATCGTCTCAGAGCTGCGGAGAAATGCGGAAGGGAGGCTATGGTCC
AGGTCGAGACATGGACCAACAGTCGCGGGCCTCCACCTCAAGCCCGCTCG
GAAACGGTCGGAAGCCCAAGATTTCCTCCTGCTTGCTCAGTGGGCTTTTT
TTGGACCTACGGGGCTTCCTGCCTTGCAGATACTCGCCTTCGGTGACTTT
TCGCACGATGGCCGCTATAGAGAACAACAGATCTTGATCCGGCGGAGGAG
GATCGGTGAGCAGCCTTACCCGAGAGTTTCATCGGACGGGGAATACAGCA
TAAGCTCATCGTTTTGCCTGGTCGATAGCGACGACCATTCTCTCTGGGAC
GGCCTGCCATTGGATGGGACTCAGTTTCTGTCTGCATGTCCTGGCACGGG
GTTGATGGAGTCCCCCTACGACCTTTAGCATGGTATCTTTGGAGTTCCTT
ATATTTGGCGTTTTCAGATTCGCGCGTTGCAAGGGCGGCAATCTGTTGTA
GATTGCGCTTTTGATATAATCGCCGCCGAAACATGCCTTTGGCAGTTGTT
ACTTACTAGTTGTGCGCCGACAGCGCCATTGTGGGAGGCTAGGGGGCGCG
ATCCTGCTTGCTTTATCTCTCGCCGCCTGCTGCCTGGGCTGGGAAGGCTT
CCAGCACTGCTAACGGTTGGCTATACTGGGATTTTCCGTAACAGTAGGCT
CTCCTTTCTAGGGACGCAGAC
back to top

Coding sequence (CDS) from alignment at JC12F:44113..46333-

>KJC3_012947-T1 ID=KJC3_012947-T1|Name=KJC3_012947-T1|organism=Aspergillus niger KJC3|type=CDS|length=957bp|location=Sequence derived from alignment at JC12F:44113..46333- (Aspergillus niger KJC3)
ATGTATGAAAGGCATGAGCCGCTGGACTTGCAACTGACCTGTCGCATGTG
GTGCGTAGGGACCTGCCTTCCAGCCGGAATTCTGGACACCAACGGATACC
TGGTCCGCCACCAGCAACGGATCCATTCGCTTTGCTTGATCACCGACGGC
ACCTGTCCTCATGCCGGCCGTCGTCTAGAGGGCCTGTCGAGTTTGACGGC
ACTGACTGACCTGGAATGGGAAGGCATCCAGCATCCATTCGAAATGCGCA
CCTTGTGCGAGTGTCTCCGACAAAATCATCGGCGGCTGAAGGCGGTATCC
ATTGGACTTCTGTTGGATCCGAACGTACCCACATCCCATGAGGATATTCT
GGAGGTCTTCTGGCCACCTCGAGCGCAGGACGACTGCACGCCGGGCGAGC
GGGAATGGTTCCCATCTCTCACATCCTTGACATTCTCTCGCGTCCCGTTC
CCCGACAGTCTGCTGCCGGGCGGCCAACCGTCACCGTTCCGCGCGCTCAA
GGCACTAACGATCCGAGACTGTCCCAACGAGCAGCGCTTCCTGCAGCTGT
TGGCGCGAGCCAAGGATCCGTTGACCCTCCAGCACTTCGAGATCTGCAGT
GACTACCTGCGCGATTCAGAGGACCGATTGGCGTCCATTGCGATCGTCGA
ATTTCTACTCTCATTTCGTGGCTTGCGACGGCTGTACCTGAAGGTGGCCA
ACTTTCCCCGGTTCCTGCCGGGTCTTGGTGATGCCATCAAACATCACCAA
GCCACGCTCCACGGTCTGGTTTTTCACGAGCGTCGGCTGATGCCAATCGA
CGCTGAAAGGCTGTTTGAAGATCTTCGGGATGTGAATATGGCATCCCCCA
ATATTCCGCAAATTCTACGACATAGTTCCCCCGCCGCTCTTGGCCTCTGT
CTTCGCCCGGCCAGCGCGGTAAGTGTATCGTTAGCACCCATCCCCACGGC
TATATGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012947KJC3_012947Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012947-T1KJC3_012947-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012947-T1.cdsKJC3_012947-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012947-T1.utr3p2KJC3_012947-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_012947-T1.utr3p1KJC3_012947-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012947-T1.exon2KJC3_012947-T1.exon2Aspergillus niger KJC3exon
KJC3_012947-T1.exon1KJC3_012947-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012947-T1.utr5p1KJC3_012947-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC12FsupercontigJC12F:44113..46333 -
Powered by Drupal