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KJC3_012950-T1, KJC3_012950-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012950-T1
Unique NameKJC3_012950-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC12F:123568..125036+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012950-T1 ID=KJC3_012950-T1|Name=KJC3_012950-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1469bp|location=Sequence derived from alignment at JC12F:123568..125036+ (Aspergillus niger KJC3)
GGCTCATCTCTCGCAAATGGCATCGTACTCGGGGGATTCCAGGCACCGAG
GTCCATGGAACCGAGATGCAGCAAAAGTCGGAAATGGGCCGGGGCTGGGA
GTGGTAAGAACGCTTCCAACATACGCCCGGCGCATGTACGACGAGAGCTG
CGCGCTAACCGATATGCAGGTGGCCTGGCGTGTTGGGACAGTTCTTCTGG
TCCTGGATTGTGGGCCCCGTCGTCCTCTGGAAATCCCGTCACATCCACGA
CACCCACGGCTGGCGAGTCCAGACGATAGGCTGCGTCATTGCCAAGTGAG
TCAATCGGTCCGATGAGGTCTGTCGCACGACTGATCCGTCATCTAGTCTC
CCGGCGACGCCGATGTGGCTCATCGCCCTTTATGTTCCCGCCATGGAGCC
GGTCAATCAGTACTGGCTACCGCCCCAGTGGTAGGTGCTCCGAGCTGCCA
CCAACAGGAAAATAGAAATGAACAAGAAAGAACCGAGAAAACGGAGCTGA
CACCTGCAGGATCTGCCTCTCTATCTGGGTGATGGAGGTTTTTGCTGTTC
TCCTGCCGTGCCGGGAGGTGATACGCCATCACGCTATCCGACAAGGGGCC
TTCGATTCGATCGCACGGTGGGAACCAAATACTAATCCCATTGCCGACGG
CACCATGGCCCGCAGGTCAGCCTCCATTCTCGTTGAGTTCACAGGGTTTG
GCCGAGAATCATGGAGTAGAACTCTTGGCTCCAGCTCCAGCTCTCGGGAT
AGCATATTCACCAAGCGTGCGCTTGAATGTGTCTTGGCGCGCAATCCTGC
CCCGCTGCAGGATTTCTCCGCCCATCGCGACTTTTCCGGAGAGAATATAG
CTTTCCTGACCCGAGTGGCAGAATGGAAGAGCTCGCTGCCCCATGCGGTC
TGGGATAGCAGGATTTTAGACTATGGAGATCTTACCGACTTGATTCGGGA
GCAGTTTCACCGCGCGCTGTGTATTTACACGACGTTCATCAGTAATCGCC
ATGCGCAGGTTCCGATCAACATCTCTTCGCAGGACCGGAAGGAGCTGGAG
AACGTCTTCGAGAGCCCTGCTGGGCTTCTCTTCGGAGACGGGCGCCCGGC
CAATCCCGCCGTTCCGTTCGATTCGCCAGGCTATGGTCCCACGCCCTCAG
CGTCTCCGATCGCCTCCATAAAGGCCGAGTCCGGTTCGCTATTCGCCGAC
AATTGCCAGGTGCAATACTGGGGCGAGATTCCCCAGACATTCAATGCGAC
GGTCTTTGACCGAGCCGAGGAGAGCATCAAGGATCTCGTCCTCACCAACA
CGTGGCCTAAGTTTGTTCGAAGTTGCGGCATCGCAGCTGAGGTTGATTTG
CTGGCGGAAAGCTAAAGTCCTGCGTGCTGGTTTGGGAACGAGGTCGCCAG
CGATGGACGACTGGATTGGATGGCATCTGTCTGGGATGTTGATAAAATTC
TATAGATTAATATGGCGGA
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Coding sequence (CDS) from alignment at JC12F:123568..125036+

>KJC3_012950-T1 ID=KJC3_012950-T1|Name=KJC3_012950-T1|organism=Aspergillus niger KJC3|type=CDS|length=1848bp|location=Sequence derived from alignment at JC12F:123568..125036+ (Aspergillus niger KJC3)
ATGTGGCTCATCGCCCTTTATGTTCCCGCCATGGAGCCGGTCAATCAGTA
CTGGCTACCGCCCCAGTGGATCTGCCTCTCTATCTGGGTGATGGAGGTTT
TTGCTGTTCTCCTGCCGTGCCGGGAGGTGATACGCCATCACGCTATCCGA
CAAGGGGCCTTCGATTCGATCGCACGGTGGGAACCAAATACTAATCCCAT
TGCCGACGGCACCATGGCCCGCAGGTCAGCCTCCATTCTCGTTGAGTTCA
CAGGGTTTGGCCGAGAATCATGGAGTAGAACTCTTGGCTCCAGCTCCAGC
TCTCGGGATAGCATATTCACCAAGCGTGCGCTTGAATGTGTCTTGGCGCG
CAATCCTGCCCCGCTGCAGGATTTCTCCGCCCATCGCGACTTTTCCGGAG
AGAATATAGCTTTCCTGACCCGAGTGGCAGAATGGAAGAGCTCGCTGCCC
CATGCGGTCTGGGATAGCAGGATTTTAGACTATGGAGATCTTACCGACTT
GATTCGGGAGCAGTTTCACCGCGCGCTGTGTATTTACACGACGTTCATCA
GTAATCGCCATGCGCAGGTTCCGATCAACATCTCTTCGCAGGACCGGAAG
GAGCTGGAGAACGTCTTCGAGAGCCCTGCTGGGCTTCTCTTCGGAGACGG
GCGCCCGGCCAATCCCGCCGTTCCGTTCGATTCGCCAGGCTATGGTCCCA
CGCCCTCAGCGTCTCCGATCGCCTCCATAAAGGCCGAGTCCGGTTCGCTA
TTCGCCGACAATTGCCAGGTGCAATACTGGGGCGAGATTCCCCAGACATT
CAATGCGACGGTCTTTGACCGAGCCGAGGAGAGCATCAAGGATCTCGTCC
TCACCAACACGTGGCCTAAGTTTGTTCGAAGTTGCGGCATCGCAGCTGAG
GTTGATTTGCTGGCGGAAAGCTAAATGTGGCTCATCGCCCTTTATGTTCC
CGCCATGGAGCCGGTCAATCAGTACTGGCTACCGCCCCAGTGGATCTGCC
TCTCTATCTGGGTGATGGAGGTTTTTGCTGTTCTCCTGCCGTGCCGGGAG
GTGATACGCCATCACGCTATCCGACAAGGGGCCTTCGATTCGATCGCACG
GTGGGAACCAAATACTAATCCCATTGCCGACGGCACCATGGCCCGCAGGT
CAGCCTCCATTCTCGTTGAGTTCACAGGGTTTGGCCGAGAATCATGGAGT
AGAACTCTTGGCTCCAGCTCCAGCTCTCGGGATAGCATATTCACCAAGCG
TGCGCTTGAATGTGTCTTGGCGCGCAATCCTGCCCCGCTGCAGGATTTCT
CCGCCCATCGCGACTTTTCCGGAGAGAATATAGCTTTCCTGACCCGAGTG
GCAGAATGGAAGAGCTCGCTGCCCCATGCGGTCTGGGATAGCAGGATTTT
AGACTATGGAGATCTTACCGACTTGATTCGGGAGCAGTTTCACCGCGCGC
TGTGTATTTACACGACGTTCATCAGTAATCGCCATGCGCAGGTTCCGATC
AACATCTCTTCGCAGGACCGGAAGGAGCTGGAGAACGTCTTCGAGAGCCC
TGCTGGGCTTCTCTTCGGAGACGGGCGCCCGGCCAATCCCGCCGTTCCGT
TCGATTCGCCAGGCTATGGTCCCACGCCCTCAGCGTCTCCGATCGCCTCC
ATAAAGGCCGAGTCCGGTTCGCTATTCGCCGACAATTGCCAGGTGCAATA
CTGGGGCGAGATTCCCCAGACATTCAATGCGACGGTCTTTGACCGAGCCG
AGGAGAGCATCAAGGATCTCGTCCTCACCAACACGTGGCCTAAGTTTGTT
CGAAGTTGCGGCATCGCAGCTGAGGTTGATTTGCTGGCGGAAAGCTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012950KJC3_012950Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012950-T1.utr5p1KJC3_012950-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012950-T1.exon1KJC3_012950-T1.exon1Aspergillus niger KJC3exon
KJC3_012950-T1.exon2KJC3_012950-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012950-T1.cdsKJC3_012950-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012950-T1.utr3p1KJC3_012950-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012950-T1KJC3_012950-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036305
DBxrefInterPro:IPR016137
DBxrefPFAM:PF00615
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC12FsupercontigJC12F:123568..125036 +
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