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KJC3_012966-T1, KJC3_012966-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012966-T1
Unique NameKJC3_012966-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC14F:191557..193196+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012966-T1 ID=KJC3_012966-T1|Name=KJC3_012966-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1640bp|location=Sequence derived from alignment at JC14F:191557..193196+ (Aspergillus niger KJC3)
CTCGTGCTTGTTACGGTGGCGTCGCTCGTTCAGGTAAAACGGCCACCGCC
TACTCCTATTGACAATCATATCGGTGTCTAATTGAATCATTAGGTGTTTC
TCACGGTCTTGATGTGGCTCATCTCTCGCAAATGGCATCGTACTTGGGGG
ATTCCAGGCACCGAGGTCCATGGAACCGAGATGCAGCAAAAGTCGGAAAT
GGGCCGGGGCTGGGAGTGGTAAGAACTCTTCCAACATACGCCCGGCGCAT
GTACGACGAGAGCTGCGCGCTAACCGATATGCAGGTGGCCTGGCGTGTTG
GGACAGTTCTTCTGGTCCTGGATTGTGGGCCCCGTCGTCCTCTGGAAATC
CCGTCACATCCACGACACCCACGGCTGGCGAGTCCAGACGATAGGCTGCG
TCATCGCCAAGTGAGTCAATCGGTCCGATGAGGTCTGTCGCACGACTGAT
CCGTCATCTAGTCTCCCGGCGACGCCGATGTGGCTCATCGCCCTTTATGT
TCCCGCCATGGAGCCGGTCAATCAGTACTGGCTACCGCCCCAGTGGTAGG
TGCTCCGAGCTGCCACCAACAGGAAAATAGAAATGAACAAGAAAGACCGA
GAAAACGGAGCTGACACCTGCAGGATCTGCCTCTCTATCTGGGTGATGGA
GGTTTTTGCTGTTCTCCTGCCGTGCCGGGAGGTGATACGCCATCACGCTA
TCCGACAAGGGGCCTTCGATTCGATCGCACGGTGGGAACCAAATACTAAT
CCCATTGCCGACGGCACCATGGCCCGCAGGTCAGCCTCCATTCTCGTTGA
GTTCACAGGGTTTGGCCGAGAATCATGGAGTAGAACTCTTGGCTCCAGCT
CCAGCTCTCGGGATAGCATATTCACCAAGCGTGCGCTTGAATGTGTCTTG
GCGCGCAATCCTGCCCCGCTGCAGGATTTCTCCGCCCATCGCGACTTTTC
CGGAGAGAATATAGCTTTCCTGACCCGAGTGGCAGAATGGAAGAGCTCGC
TGCCCCATGCGGTCTGGGATAGCAGGATTTTAGACTATGGAGATCTTACC
GACTTGATTCGGGAGCAGTTTCACCGCGCGCTGTGTATTTACACGACGTT
CATCAGTAATCGCCATGCGCAGGTTCCGATCAACATCTCTTCGCAGGACC
GGAAGGAGCTGGAGAACGTCTTCGAGCGCCCTGCTGGGCTTCTCTTCGGA
GACGGGCGCCCGGCGAATCCCGCCGTTCCGTTCGATTCGCCAGGCTATGG
TCCCACGCCCTCAGCGTCTCCGATCGCCTCCATCAAGGCCGAGTCCGGTT
CGCTATTCGCCGACAATGGCCAGGTGCAATACTGGGGCGAGATTCCCCAG
ACATTCAATGCGACGGTCTTTGACCGAGCCGAGGAGAGCATCAAGGATCT
CGTCCTCACCAACACGTGGCCTAAGTTTGTTCGAAGTTGCGGCATCGCAG
CTGAGGTTGCTTTGCTGGCGGAAAGCTAGAGTCCTGCATGCTGGTTTCGG
AACGAGGTTGCCAGCGATGGAACATAGGTTTGCATGGCATCAGTCTGGGA
TGTTTATAAAGTACCATAGATAAATGTGGTGGAGCAACTCATCGGATCAC
ATATTCTATCGGAACGTAGCACTGCCTTGGTACTATAGAG
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Coding sequence (CDS) from alignment at JC14F:191557..193196+

>KJC3_012966-T1 ID=KJC3_012966-T1|Name=KJC3_012966-T1|organism=Aspergillus niger KJC3|type=CDS|length=1848bp|location=Sequence derived from alignment at JC14F:191557..193196+ (Aspergillus niger KJC3)
ATGTGGCTCATCGCCCTTTATGTTCCCGCCATGGAGCCGGTCAATCAGTA
CTGGCTACCGCCCCAGTGGATCTGCCTCTCTATCTGGGTGATGGAGGTTT
TTGCTGTTCTCCTGCCGTGCCGGGAGGTGATACGCCATCACGCTATCCGA
CAAGGGGCCTTCGATTCGATCGCACGGTGGGAACCAAATACTAATCCCAT
TGCCGACGGCACCATGGCCCGCAGGTCAGCCTCCATTCTCGTTGAGTTCA
CAGGGTTTGGCCGAGAATCATGGAGTAGAACTCTTGGCTCCAGCTCCAGC
TCTCGGGATAGCATATTCACCAAGCGTGCGCTTGAATGTGTCTTGGCGCG
CAATCCTGCCCCGCTGCAGGATTTCTCCGCCCATCGCGACTTTTCCGGAG
AGAATATAGCTTTCCTGACCCGAGTGGCAGAATGGAAGAGCTCGCTGCCC
CATGCGGTCTGGGATAGCAGGATTTTAGACTATGGAGATCTTACCGACTT
GATTCGGGAGCAGTTTCACCGCGCGCTGTGTATTTACACGACGTTCATCA
GTAATCGCCATGCGCAGGTTCCGATCAACATCTCTTCGCAGGACCGGAAG
GAGCTGGAGAACGTCTTCGAGCGCCCTGCTGGGCTTCTCTTCGGAGACGG
GCGCCCGGCGAATCCCGCCGTTCCGTTCGATTCGCCAGGCTATGGTCCCA
CGCCCTCAGCGTCTCCGATCGCCTCCATCAAGGCCGAGTCCGGTTCGCTA
TTCGCCGACAATGGCCAGGTGCAATACTGGGGCGAGATTCCCCAGACATT
CAATGCGACGGTCTTTGACCGAGCCGAGGAGAGCATCAAGGATCTCGTCC
TCACCAACACGTGGCCTAAGTTTGTTCGAAGTTGCGGCATCGCAGCTGAG
GTTGCTTTGCTGGCGGAAAGCTAGATGTGGCTCATCGCCCTTTATGTTCC
CGCCATGGAGCCGGTCAATCAGTACTGGCTACCGCCCCAGTGGATCTGCC
TCTCTATCTGGGTGATGGAGGTTTTTGCTGTTCTCCTGCCGTGCCGGGAG
GTGATACGCCATCACGCTATCCGACAAGGGGCCTTCGATTCGATCGCACG
GTGGGAACCAAATACTAATCCCATTGCCGACGGCACCATGGCCCGCAGGT
CAGCCTCCATTCTCGTTGAGTTCACAGGGTTTGGCCGAGAATCATGGAGT
AGAACTCTTGGCTCCAGCTCCAGCTCTCGGGATAGCATATTCACCAAGCG
TGCGCTTGAATGTGTCTTGGCGCGCAATCCTGCCCCGCTGCAGGATTTCT
CCGCCCATCGCGACTTTTCCGGAGAGAATATAGCTTTCCTGACCCGAGTG
GCAGAATGGAAGAGCTCGCTGCCCCATGCGGTCTGGGATAGCAGGATTTT
AGACTATGGAGATCTTACCGACTTGATTCGGGAGCAGTTTCACCGCGCGC
TGTGTATTTACACGACGTTCATCAGTAATCGCCATGCGCAGGTTCCGATC
AACATCTCTTCGCAGGACCGGAAGGAGCTGGAGAACGTCTTCGAGCGCCC
TGCTGGGCTTCTCTTCGGAGACGGGCGCCCGGCGAATCCCGCCGTTCCGT
TCGATTCGCCAGGCTATGGTCCCACGCCCTCAGCGTCTCCGATCGCCTCC
ATCAAGGCCGAGTCCGGTTCGCTATTCGCCGACAATGGCCAGGTGCAATA
CTGGGGCGAGATTCCCCAGACATTCAATGCGACGGTCTTTGACCGAGCCG
AGGAGAGCATCAAGGATCTCGTCCTCACCAACACGTGGCCTAAGTTTGTT
CGAAGTTGCGGCATCGCAGCTGAGGTTGCTTTGCTGGCGGAAAGCTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012966KJC3_012966Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012966-T1KJC3_012966-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012966-T1.utr5p1KJC3_012966-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_012966-T1.utr5p2KJC3_012966-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012966-T1.exon1KJC3_012966-T1.exon1Aspergillus niger KJC3exon
KJC3_012966-T1.exon2KJC3_012966-T1.exon2Aspergillus niger KJC3exon
KJC3_012966-T1.exon3KJC3_012966-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012966-T1.cdsKJC3_012966-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012966-T1.utr3p1KJC3_012966-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036305
DBxrefInterPro:IPR016137
DBxrefPFAM:PF00615
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC14FsupercontigJC14F:191557..193196 +
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