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KJC3_012981-T1, KJC3_012981-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012981-T1
Unique NameKJC3_012981-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC17F:52142..53956-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012981-T1 ID=KJC3_012981-T1|Name=KJC3_012981-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1815bp|location=Sequence derived from alignment at JC17F:52142..53956- (Aspergillus niger KJC3)
CTCCGACACGACCCCAAGAGTAAGAAGCATGTATATCTCCGGGCCTTTCT
CCAACATCCCAGCTTCCCTGCAGCACTTGATGCCCTGCTCCTTATTCCGG
GGCTTTGGGCCAAAATGCAACTGGGCGTGCTGCATACCATGGTGTCAATG
CGATGTGACGAGGTGAGTGGCCCAAGTGTCTACGAAATGAAAGACTCTTC
TAAGGAACCCGTTATCTCTAGCCCATCCTGTCCTACCTCGAAACCATCCG
CACTGTCTGGATGGATCGTATTTTCGACGGGAACAACACCCTTCCTGTTC
ACGCAGATGCGGAGACCGTTCTCGCGCTGGAATCTCAAGTCCCAAAGCTC
TCGGAACCGGACCGGGAATATGTGCGATCTCGGATGATGGACGACCGGAC
GTTGTTTCCATCGATCGACGAGTCCGACACCCGGGCGGCATTGTGGGAGC
GACTGAAGCAGATCGATACCCCTATTCCCACCCTAGGGACGTTTTTCCAG
GACCTCCGTTACTTAGGTGTTGCCAGCAAGGTGATGAAGGCTCTTCTTCT
TCCACCAGAGGACGTGGGCTCGAAGAAGGCCAAGAAGATCACTGTCGACT
GTGAACTCGGTACGCAGCATCGGGCCGATGGCAGCGTGTCATTAAGAGAG
ACAAGACTGCAAGTACGGCGGGGATTGCACGAGCTCTGGCGCTTCAGCTT
CCAATACGGGCTTGACATGACCGAGGTTGCACGTCCTCAGCCGCGTAAGG
GGAAGAAAGCGTGTAGCTTCTATCCGGTCCCGAAGTGCTCGACATCGGTT
GACCAAACGGCGTTGTGGCGCCACTTCTACTGGCTAGCTGACCAGCAAGG
CTTTCAAATCCCGGCTATAGCCGAGTTTGCGCCTGAACAAGCGTCCCTGC
CCAACCCGCAAACTCCGGAGGGTCTTGGCAGCACCGAAGAGGATGAAGCA
GTGAATCGACGTTGCGGTATCCCATACGCCGATACGGTCGATGCGGATCG
CTTCGCCCTGGAAGGGAATTGACTGTGGCAGCCCTGGGAGTCCCCACAGG
TTTCCGCTGTGTTCTTCCGACGGTCACAATTCCAGACCTTCTTTCGTTAC
CTTTGGGATGGCGGTGGAATCAGTCAGGCTACAAACGCCGCGGACGAATC
GGCAGCGACCGAGGAAGCGGCGGCGGTAGATCAAGAGCTTCCGGATCGTC
ATCCTGACCATCGTATGCCATCGCCAAGTTTCTCTCCCAATTTCCAGATA
CGCTGTCCAGCTGATGACGACTGGGTTATGACAATGTGGGACCATGGGAT
AGTACCACTGGAGATGCCTGCGGGCAATCTGGAGGTGGTCGTAACCATCC
CGGGTTACGACCTAAAACGAATCTCGCTGCCGAATGACGAGCCCATCATC
AACAGCTTCTTCAAAGAATTGAAATTGCGCCGATTCGTTATCTACAGCCT
GGATCACCACAAGGTGTCTGAAGAGCCAAGTTTTTATATCTGGCATCTGA
CACACCCATGGGAAACTGTTCAGGCCATATTGACCGAGGAGAATGTGCAA
GATTATACGACATCCGATGAAACTCGACTCAAAAGGAGAAGAAGGGGGAT
TGCTGAGGCAATAGATGACATTGCTGCGTGGGTGGACGAGCAAATTTTTA
AGTTATCCGTTCCTGCTCCCTACCCTTGGGATTGGAATGTACAAGAAGAG
GAGTATTAATCAGAATGGAACGATTCAAGTTATAGCTCTCCAGGGTCATA
CCGTCCTAACAAGAAAGACATGCTGGGCTTTCCGTTGTATGATATCAATG
TAGCACAAAAGAAGG
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Coding sequence (CDS) from alignment at JC17F:52142..53956-

>KJC3_012981-T1 ID=KJC3_012981-T1|Name=KJC3_012981-T1|organism=Aspergillus niger KJC3|type=CDS|length=1698bp|location=Sequence derived from alignment at JC17F:52142..53956- (Aspergillus niger KJC3)
CCCATCCTGTCCTACCTCGAAACCATCCGCACTGTCTGGATGGATCGTAT
TTTCGACGGGAACAACACCCTTCCTGTTCACGCAGATGCGGAGACCGTTC
TCGCGCTGGAATCTCAAGTCCCAAAGCTCTCGGAACCGGACCGGGAATAT
GTGCGATCTCGGATGATGGACGACCGGACGTTGTTTCCATCGATCGACGA
GTCCGACACCCGGGCGGCATTGTGGGAGCGACTGAAGCAGATCGATACCC
CTATTCCCACCCTAGGGACGTTTTTCCAGGACCTCCGTTACTTAGGTGTT
GCCAGCAAGGTGATGAAGGCTCTTCTTCTTCCACCAGAGGACGTGGGCTC
GAAGAAGGCCAAGAAGATCACTGTCGACTGTGAACTCGGTACGCAGCATC
GGGCCGATGGCAGCGTGTCATTAAGAGAGACAAGACTGCAAGTACGGCGG
GGATTGCACGAGCTCTGGCGCTTCAGCTTCCAATACGGGCTTGACATGAC
CGAGGTTGCACGTCCTCAGCCGCGTAAGGGGAAGAAAGCGTGTAGCTTCT
ATCCGGTCCCGAAGTGCTCGACATCGGTTGACCAAACGGCGTTGTGGCGC
CACTTCTACTGGCTAGCTGACCAGCAAGGCTTTCAAATCCCGGCTATAGC
CGAGTTTGCGCCTGAACAAGCGTCCCTGCCCAACCCGCAAACTCCGGAGG
GTCTTGGCAGCACCGAAGAGGATGAAGCAGTGAATCGACGTTGCGGTATC
CCATACGCCGATACGGTCGATGCGGATCGCTTCGCCCTGGAAGGGAATTG
AATGCAACTGGGCGTGCTGCATACCATGGTGTCAATGCGATGTGACGAGC
CCATCCTGTCCTACCTCGAAACCATCCGCACTGTCTGGATGGATCGTATT
TTCGACGGGAACAACACCCTTCCTGTTCACGCAGATGCGGAGACCGTTCT
CGCGCTGGAATCTCAAGTCCCAAAGCTCTCGGAACCGGACCGGGAATATG
TGCGATCTCGGATGATGGACGACCGGACGTTGTTTCCATCGATCGACGAG
TCCGACACCCGGGCGGCATTGTGGGAGCGACTGAAGCAGATCGATACCCC
TATTCCCACCCTAGGGACGTTTTTCCAGGACCTCCGTTACTTAGGTGTTG
CCAGCAAGGTGATGAAGGCTCTTCTTCTTCCACCAGAGGACGTGGGCTCG
AAGAAGGCCAAGAAGATCACTGTCGACTGTGAACTCGGTACGCAGCATCG
GGCCGATGGCAGCGTGTCATTAAGAGAGACAAGACTGCAAGTACGGCGGG
GATTGCACGAGCTCTGGCGCTTCAGCTTCCAATACGGGCTTGACATGACC
GAGGTTGCACGTCCTCAGCCGCGTAAGGGGAAGAAAGCGTGTAGCTTCTA
TCCGGTCCCGAAGTGCTCGACATCGGTTGACCAAACGGCGTTGTGGCGCC
ACTTCTACTGGCTAGCTGACCAGCAAGGCTTTCAAATCCCGGCTATAGCC
GAGTTTGCGCCTGAACAAGCGTCCCTGCCCAACCCGCAAACTCCGGAGGG
TCTTGGCAGCACCGAAGAGGATGAAGCAGTGAATCGACGTTGCGGTATCC
CATACGCCGATACGGTCGATGCGGATCGCTTCGCCCTGGAAGGGAATTGA
ATGCAACTGGGCGTGCTGCATACCATGGTGTCAATGCGATGTGACGAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012981KJC3_012981Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012981-T1KJC3_012981-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012981-T1.cdsKJC3_012981-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012981-T1.utr3p1KJC3_012981-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012981-T1.exon2KJC3_012981-T1.exon2Aspergillus niger KJC3exon
KJC3_012981-T1.exon1KJC3_012981-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012981-T1.utr5p1KJC3_012981-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR022198
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC17FsupercontigJC17F:52142..53956 -
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