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KJC3_013008-T1, KJC3_013008-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013008-T1
Unique NameKJC3_013008-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:422287..427724+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013008-T1 ID=KJC3_013008-T1|Name=KJC3_013008-T1|organism=Aspergillus niger KJC3|type=mRNA|length=5438bp|location=Sequence derived from alignment at ch3:422287..427724+ (Aspergillus niger KJC3)
GTGGGGAGGAAAAATGTCGGGACGGGCCGAGACGCGAACCCCTGAACCGC CCGACCGCGACGAACGCGAAAACTCGCCACCGCGATTGGTGAGGCCGAAA CGCATGACAAGACCACCAGCCCACTATGCTCAAGAGCAAGAGATCGATAC TGAGCAGAGAAACACGCGCTCCCAGCAAAAGAAGAAGAATCAGGGCAAGC CAGTCGCCCAACGTGACGCGGCGACTTCGGACGACTCCTCGGCAGAGAGC GAGGACTCAGACACCTCCAAACTTGTGAAAGAGATTGTTAAGCTCAGGAG AGAAATCAGACGTCGAGATGAACTACACAAGCAGGAGCTCCACAAAGTCA AAGAAGAGTTTGGCGCTGCCCTCGCAGAGTTTCGACATGAATTACAGACC CTGGCGAATCAACCCTCGACACCGCAACCCCACCCCGAGTCATGCGCTCA GAACAGCCACGAGGAGATCCTCCGCGAAATCCAATCCTTGCGCATTGCAG TCAATCCTTCGGGATCCCCGTCCTATGCAGATGTCGCCCGTACTCCCCCC ACCAGCCAACCGAGCAATATACGGACTCTCTCATCATGGAACACGACACC GACTACCTTCACCGACACGTTATATTGCACGATAGACACCTCGAAGATGG CAGATACTGCAAACGAGAGACCATCGGCAGGTTCAATTAGGACGGCAGTT GAGGCCGAGATCCGGACAATGGAAAACTACACGAACTGGCGGTGCCGCGC TGTCACCGTGGACCCGAAGAACACCAGCCGGATCAGAATTGCTTGCCGAG ACGAGGCTGAACACCAGCTGGTTAAGAAGGTGGCGGAATCCAAGGTCGGC GCAGGAGCCCGAGTGCTTCGTGACGAACTCTACCCGATCAAAGTCGACAG CGTCAACAGAACTGCAGTCCTTGATGAAAACGGTGACATCCGAGCAGGAG CTGCGGCAGCCTTTGGCGAAGAGAACGAAGCTTCCATCGCTAAGATTGCA TGGCTCAGCAGAAAGGAGAATGCGAAGGCCTACGGGTCAATGGTCGTTTA TCTGACCAGAGGCGGTGATGCACGGAGGCTCCTGGCCGACGGGTTCTTCC ACGCTGGGGGAGAATCCGGCGTGACCAGCACCTTTGAATACCGACCCCGA CCGATGCAATGCTATAATTGCCAAGAGATTGGGCATAAGGCGTTCCAGTG TAAGAACGCGCAGAAATGTGCAAAATGTGCCGCGGAGGGCCATCACCACA GTAGCTGCGATCAAACGATTCCAAAGTGCATTCCATGCGGAGGCCCTCAC GAATCGTACAGCAAACACTGTCGGAAGCTCTACCCATCGCATCATGAATA AGACTCTTCGAGTTATTCAACTGAATGTGAGAAAACAAGGGGCAGTGCAC GAGAGCTTAATGAATGACGAAGAGACTCAGAACGCGGTGGCGTTAGCGAT CCAGGAACCCCAGGCGAGGAGGATTCAAGGCCGGCTCTTGACTACCCCGA TGGGACACCACAGATGGACGAAGATGGTTCCCTCTACTTGGAGGGAAGGC AGGTGGGCAATTCGAAGCATGCTCTGGATTAATAAAGATGTCGAGGCGGA ACAAGTGCCAATAGAGTCCCCGGATCTCACGGCAGCGGTTATTAGGCTTC CCGAGCGACTGATTTTCATGGCATCAGTTTACGTGGAAGGGGACAATGCC TCAGCTTTGGACGACACATGCAATCAACTACTCAACGCAATCACGAATGT ACGGCGAGATACGGGTGCGGTGGTGGAGATTTTGATTATGGGAGACTTCA ACCGGCAGGACCAACTCTGGGGAGGAGACGACGTGTCTTTGAGAAGACAA GGCGAAGCGGACCCAATCATCAATCTCATGAGTGAATACGCTCTCAGCAG TCTTGTCACACGAGGCACAAAGACATGGCATGGCGGAGGATACAGCGGGG ACTGCGAGTCGACGATCGACCTGGTCCCGGCCTCAGACAACCTAACAGAC TCAGTGATTAAGTGTGCTATACTCGGGACGGAGCACGGCTCGGACCACTG CGCTATTGAGACCGTCTTTGATGCGCCCTGGTCGCTCCCAAAGCATCAGG GACGACTTCTGTTGAAAAATGCTCCATGGAAAGAGATCAATGCCAGGATA GCGAACATTCTTGCCGCCACTCCTGCGGAGGGCACAGTGCAGCAGAAAAC CGACCGGCTCATGTCGGCGGTTTCAGAAGCGGTGCATGCGTTAACACCAA AGTCAAAACCATCACCATACGCGAAGCGGTGGTGGACCGCTGATTTAACG CAGCTCCGTTACATACACACATACTGGAGAAATCACGCCCGCTCCGAGCG GCGGGTGGGACGAAAAGCACCCTACCTGGAGACGATGGCCCGAGGCGCGG CAAAACAATACCATGATGCCATCCGGCTGCAAAAGAAAAAGCACTGGAAT CAATTTCTTGCCGACAATGATAACATATGGAAAGCAGCTAGATACCTGAA GTCGGGAGAAGACGCAGCGTTCGGGAAGATCCCGCAGCTCCTCAGAGCGG ATGGGACCACGACCACTGATCATACGGAGCAGGCAGAAGAATTGCTGGCC AAATTCTTCCCGCCCCTGCCGGACAACATTGACGATGAAGGGACTCGACC ACAAAGAGCGCCAGTCGAGATGCCTGCCATCACGATGGAGGAGATCGAAC GACAGCTGATGGCGGCAAAGTCTTGGAAGGCACCCGGCGAAGACGGTCTG CCAGCAATAGTCTGGAAGATGACTTGGCCCATAGTCAAGTACAGAGTCCT GGATCTCTTCCAGGCGTCGCTGGAAGAAGGCACGTTGCCAAGACAGTGGA GACATGCGAAGATCATACCGCTCAAAAAGCCGAACAAAGAGAACTACACC ATTGCCAAAGCATGGAGACCGATTTCGCTCCTCGCGACGCTGGGCAAGAT ACTGGAATCCGTGGTCGCAGAAAGGATCTCACACGCGGTGGAGACTCACG GGTTGCTCCCGACCAGCCACTTCGGCGCCCGAAAGCAGCGGTCCGCGGAG CAAGCACTCGTACTCTTGCAAGAACAAATCTATGCGGCATGGCGCGGCCG TCGCGTCGTGAGCTTGATCAGCTTCGACGTCAAAGGAGCCTATAACGGAG TGTGTAAAGAACCGTTGCTTCAGAGAATAAAAGCGCGAGGCATACCAGAG GATCTACTCCGGTGGGTGGAGGCGTTCTGCTCGGAACGAACAGCAACCAT CCAAATCAATGGGCAACTGTCTGAGATCCACAGCCTGCCACAGGCGGGAC TGCCGCAAGGCTCGCCGCTATCCCCGATTCTATTCCTCTTTTTCAACGCA GACCTCGTACAACGACAAATCGACAGCCAGGGAGGTGCGATTGCGTTCGT AGATGATTTTACCACATGGGTGACCGGACCAACTGCGCAGAGTAACCGAG AAGGTATTGAAGCAATCATCAATGAAGCACTTGACTGGGAGAAAAGGAGC GGCGCGACTTTTAAAGCAGACAAGACAGCCATTATCCACTTCACTCCCAA AGCTCATAAATCGGACCAGGGGCTCTTCACTATCAAGGGACAAACCGTTG AGCCCAAAGATCATGTCAAGATCCTGGGCGTCATCATGGATGCGAGACTC AAGTACAAGGAACATATTGCATGGGCAGCATCCAAAGGCTTGGAGGCAGC AATGGAGCTGCGGTGACTTCGCGGCCTCTCCCCAGCAACAGCACGGCAGG TATTCACGTCAACGGTGGCTCCGGCGGTAGACTACACCTCTCATGTCTGG ATGCACGCCTGTAAGGATAAGGCGATTGGTCCGATCAACCGAGTCCAAAG GGTGGGAGCACAGGCAATTGTCGGGACATTTCTCACTGTTGCAACCAGTG TAGCAGAGGCAGAGGCCCACATTGCCACGGCGCAGCACCGTTTTTGGAGG CAGGCCGTGAAAATGTGGACGGATCTCCATACGCTCCCGGATACCAATCC GCTCCGCCGAACTACAGCTCGGATCAGGAAATTCAGACGGTTTCACCGTT CGCCGCTGTACCAGGTGGCAGACGCGCTGAAGAACATTGATATGGAAACA CTGGAGACTATTAACCCGTTTACATTAGCACCATGGGAGACATGTATGCA GACTGATGGTGAAGCAATGCCAGACCCGCAGTCTGCACCGGGTGGATCAA TACAGATCGCGATCAGCAGCTCAGCACGGAACGGGTTTGTAGGATCTGGG GTAGCTATCGAAAAGCAGCCACCTCGATATCGAAAACCGAAATTAAAGAC CTTTTCCATGACACTGGGCGCAAGATCAGAGCAAAATCCATTCTCCGCAG AGCTAGCGGCTATAGCTCATACATTGAACGGGCTGGTGGGACTGAAAGGT TTCAGGCTCAGGCTGCTCACAAGCAACAAAGCGGCGGCCCTCACGATACA GAACCCTCGACAACAGTCAGGCCAGGAGTTCGTCTGCCAGACGTACAAGC TGATGAGCAGACTGCGGAGAAAAGGAAACCATATCGAGATTCTTTGGGTC CCTACCAGCGAAGACAACAAGTTACTGGGCCTAGCTAAGGAGCAGGCCAG GGCCGCAACCTATGAGGACGCGATCCCACAAGCACAGGTTTCCAGAATGA AGTCAACAACGTTGAATCTCGCACGATCCCAAGCAGTCACTACGAAAGCC TTGCCAGAGGACGTAAGGAGACATGTCAAACGAGTGGATGCCGCACTCCC AGGGAAGCACACGCGACAGCTGTATGATGGATTATCGTGGAAAGAAGCGA CCGTGCTGGCCCAACTCCGGACCGGCATGGCAAGATTAAATGGGTATCTT TACCGGATCAATGTCGCGCAGGCAGACCAGTGTGCATGCGGACAAGCAAG AGAAACCGTGGAGCATTTCCTCTTCCGGTGTCGGAAGTGGACTACGCAAC GGATGGCACTGCTACAATGTACTCGAACTCACCGGGGCAATCTCTCCCTC TGCCTGGGCGGGAAATCGCCTTCCGATGATCAGCAATGGACGCCGAACTT GGAGGCAGTACGAGCCTCAATACGATTTGCCATCGCCACGGGCCGACTCG ACGCCACGTAACCATGTCAACCAAGACAACGACACCCTTTCCCCAATTAA CCTACACCAACCACCTTGTGCCAAGAATGGTAGACGCGCTTCAACTGCCG AGGATAGGATGTTGAACACTTGAAGAAGCGCCTTCAAGCCAGTCTATTAA CAAATATACTAACCCACAGGGATTCCTACGATAGTGACAGCTGAGAGGAC ATATACAGAAAGGATCTATGTATGGGCTCGAAGGAGATACCGCAGATGTA CATTAGACTTCGTGTTGATAGATTAGTGATAGTTGCCCTTTCGGCTGAGC CGCCGGGCGTTAATGAATTGTGTGTGTGTGTGTCCAGG
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Coding sequence (CDS) from alignment at ch3:422287..427724+

>KJC3_013008-T1 ID=KJC3_013008-T1|Name=KJC3_013008-T1|organism=Aspergillus niger KJC3|type=CDS|length=2373bp|location=Sequence derived from alignment at ch3:422287..427724+ (Aspergillus niger KJC3)
ATGAATAAGACTCTTCGAGTTATTCAACTGAATGTGAGAAAACAAGGGGC
AGTGCACGAGAGCTTAATGAATGACGAAGAGACTCAGAACGCGGTGGCGT
TAGCGATCCAGGAACCCCAGGCGAGGAGGATTCAAGGCCGGCTCTTGACT
ACCCCGATGGGACACCACAGATGGACGAAGATGGTTCCCTCTACTTGGAG
GGAAGGCAGGTGGGCAATTCGAAGCATGCTCTGGATTAATAAAGATGTCG
AGGCGGAACAAGTGCCAATAGAGTCCCCGGATCTCACGGCAGCGGTTATT
AGGCTTCCCGAGCGACTGATTTTCATGGCATCAGTTTACGTGGAAGGGGA
CAATGCCTCAGCTTTGGACGACACATGCAATCAACTACTCAACGCAATCA
CGAATGTACGGCGAGATACGGGTGCGGTGGTGGAGATTTTGATTATGGGA
GACTTCAACCGGCAGGACCAACTCTGGGGAGGAGACGACGTGTCTTTGAG
AAGACAAGGCGAAGCGGACCCAATCATCAATCTCATGAGTGAATACGCTC
TCAGCAGTCTTGTCACACGAGGCACAAAGACATGGCATGGCGGAGGATAC
AGCGGGGACTGCGAGTCGACGATCGACCTGGTCCCGGCCTCAGACAACCT
AACAGACTCAGTGATTAAGTGTGCTATACTCGGGACGGAGCACGGCTCGG
ACCACTGCGCTATTGAGACCGTCTTTGATGCGCCCTGGTCGCTCCCAAAG
CATCAGGGACGACTTCTGTTGAAAAATGCTCCATGGAAAGAGATCAATGC
CAGGATAGCGAACATTCTTGCCGCCACTCCTGCGGAGGGCACAGTGCAGC
AGAAAACCGACCGGCTCATGTCGGCGGTTTCAGAAGCGGTGCATGCGTTA
ACACCAAAGTCAAAACCATCACCATACGCGAAGCGGTGGTGGACCGCTGA
TTTAACGCAGCTCCGTTACATACACACATACTGGAGAAATCACGCCCGCT
CCGAGCGGCGGGTGGGACGAAAAGCACCCTACCTGGAGACGATGGCCCGA
GGCGCGGCAAAACAATACCATGATGCCATCCGGCTGCAAAAGAAAAAGCA
CTGGAATCAATTTCTTGCCGACAATGATAACATATGGAAAGCAGCTAGAT
ACCTGAAGTCGGGAGAAGACGCAGCGTTCGGGAAGATCCCGCAGCTCCTC
AGAGCGGATGGGACCACGACCACTGATCATACGGAGCAGGCAGAAGAATT
GCTGGCCAAATTCTTCCCGCCCCTGCCGGACAACATTGACGATGAAGGGA
CTCGACCACAAAGAGCGCCAGTCGAGATGCCTGCCATCACGATGGAGGAG
ATCGAACGACAGCTGATGGCGGCAAAGTCTTGGAAGGCACCCGGCGAAGA
CGGTCTGCCAGCAATAGTCTGGAAGATGACTTGGCCCATAGTCAAGTACA
GAGTCCTGGATCTCTTCCAGGCGTCGCTGGAAGAAGGCACGTTGCCAAGA
CAGTGGAGACATGCGAAGATCATACCGCTCAAAAAGCCGAACAAAGAGAA
CTACACCATTGCCAAAGCATGGAGACCGATTTCGCTCCTCGCGACGCTGG
GCAAGATACTGGAATCCGTGGTCGCAGAAAGGATCTCACACGCGGTGGAG
ACTCACGGGTTGCTCCCGACCAGCCACTTCGGCGCCCGAAAGCAGCGGTC
CGCGGAGCAAGCACTCGTACTCTTGCAAGAACAAATCTATGCGGCATGGC
GCGGCCGTCGCGTCGTGAGCTTGATCAGCTTCGACGTCAAAGGAGCCTAT
AACGGAGTGTGTAAAGAACCGTTGCTTCAGAGAATAAAAGCGCGAGGCAT
ACCAGAGGATCTACTCCGGTGGGTGGAGGCGTTCTGCTCGGAACGAACAG
CAACCATCCAAATCAATGGGCAACTGTCTGAGATCCACAGCCTGCCACAG
GCGGGACTGCCGCAAGGCTCGCCGCTATCCCCGATTCTATTCCTCTTTTT
CAACGCAGACCTCGTACAACGACAAATCGACAGCCAGGGAGGTGCGATTG
CGTTCGTAGATGATTTTACCACATGGGTGACCGGACCAACTGCGCAGAGT
AACCGAGAAGGTATTGAAGCAATCATCAATGAAGCACTTGACTGGGAGAA
AAGGAGCGGCGCGACTTTTAAAGCAGACAAGACAGCCATTATCCACTTCA
CTCCCAAAGCTCATAAATCGGACCAGGGGCTCTTCACTATCAAGGGACAA
ACCGTTGAGCCCAAAGATCATGTCAAGATCCTGGGCGTCATCATGGATGC
GAGACTCAAGTACAAGGAACATATTGCATGGGCAGCATCCAAAGGCTTGG
AGGCAGCAATGGAGCTGCGGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013008KJC3_013008Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013008-T1.utr5p1KJC3_013008-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013008-T1.exon1KJC3_013008-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013008-T1.cdsKJC3_013008-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013008-T1.utr3p1KJC3_013008-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013008-T1KJC3_013008-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR043502
DBxrefInterPro:IPR005135
DBxrefInterPro:IPR036691
DBxrefInterPro:IPR000477
DBxrefPFAM:PF00078
DBxrefPFAM:PF14529
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:422287..427724 +