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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:561529..563191- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013010-T1 ID=KJC3_013010-T1|Name=KJC3_013010-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1663bp|location=Sequence derived from alignment at ch3:561529..563191- (Aspergillus niger KJC3) GTTGCTAGTTATCTCTAATATCACTGCAACCAATCCACACGACAATGGCA
AAAAAAGGCACCAAGAAGAAGAGTGTGAAACAGGCCTTGGAGCCTCGGGT
GTGCTCGGTGATTGATTACAACCAGCCAGAATCATCGTAAGGACTCATAT
AGCCAAGACGCATCATCTTCTGGATAACTAACTCCATATGACAATGTAGT
CTATACGAACGTCCTGTTATAAAACTTCGCATCGGACAGAAGGAGTATTC
TATATTGGAAGGTTACCTCAGTGATTACCCTCGGCTGCGAAGTAATGTCG
GTTTTCATTCACGGATTACGCTTTCAGATATCGACGAGGACATTGGACAT
ACCTTTGTCCACTTCATATATACCAGGGAGTATGAAACTCTTAAACCTAC
TCCCAACCCGGGTATACATGATTTGCCAAGGGAATTTAGAAGGAGTGTCC
AAGTCTACCGTGCGGCCATGGTCTATGAGATACATGGTCTAGAGGTACTT
GCTAAGAAGTATATCCAAATTCTCGGCGAATCAATTCCCATTTTCGATGT
ACTAGAGGCCACCAGAATGATATTTTCAAAACTCCCAGATAATGGAATCT
GGTTACGTGAATATATCTACACAAAGCTTAAGAAGGCGTTTGTGCTAGAT
GAAACGATATTCACATGTGGTGGGATTTACCAGGGATTTGCGGAGGACCG
CCCTTTTGAGAAAGAGTTGATGAGGATGATGGCCGATATCTATTCTGACA
CCATATCCTCGCTTCGTTCTGAAGGCCAGAGAAGCCAAAAAGAACAGATA
ATCCCACAGAAAGGTAAGTAACTCAAATACTGGAGATAGCTAATAGAGTG
GTCCGCTGACTGACTGAGACCCTACAGTTGAGCCGTCAACTGAATATCCT
GTTCCCGAAGAACAGCCATCTGAGCCAGAATGTCCCCTTGAGCCAGAATA
TCCCCCTGAGCCAGAATACCCCCCTGAGCCAGAATACCCTGTTCCCGAAG
AACAGCCCCCTGAGCCAGAATATCCCCCTGAGCCAGAATACCCCCCTGAG
CCAGATTACCCCCCTGAGCCAGAATACCCTGTTCCCGAAGAACAGCCCCC
TGAGCCAGATTACCCCCCTGAGCCAGAATACCCTGTTCCCGAAGAACAGC
CCCCTGAGCCAGAATACCCCCCTGAGCCAGATTACACTGTTTCCGAAGAA
CAGCCTTTCGGCAAGATGGTGTCTGGACCTAGTGTCTCTATCACAGAGCT
CCCCGAGGACATTCGTCTATATATTAACTGGACAAACTTGGGAATAGAAG
AAAGGAAGCGAAGAAAGAAAATTCTTAAGCAGAAAAACTTTCCAGTTCCA
CATCGTGATGGTACCTTTTCTTGAAGATTTGGTCTTTCAGCAGGGCTCCA
ATGAGCTGTTACTGTATTCAACATACAGTAAATAACACCCGATCATGTTG
AGCGCTTCTCAAATATTCCTTTCCACTTGTTGGTTGTGACTATTGGACTA
TTAACTAGTCTCATCAGAGGTCAATCAGAAACCATTACATGTCATTTTAG
CTAAACTTGAACGCTTAACGTAGAACATGGCATGTTTATCCATGCCCAGT
CTCTACATAACCCGCAGTTGTAGCGCGGCGGGCAGCAAATTGCAATATAA
TCGTCTATCCTGT back to topCoding sequence (CDS) from alignment at ch3:561529..563191- >KJC3_013010-T1 ID=KJC3_013010-T1|Name=KJC3_013010-T1|organism=Aspergillus niger KJC3|type=CDS|length=3609bp|location=Sequence derived from alignment at ch3:561529..563191- (Aspergillus niger KJC3) TTGAGCCGTCAACTGAATATCCTGTTCCCGAAGAACAGCCATCTGAGCCA GAATGTCCCCTTGAGCCAGAATATCCCCCTGAGCCAGAATACCCCCCTGA GCCAGAATACCCTGTTCCCGAAGAACAGCCCCCTGAGCCAGAATATCCCC CTGAGCCAGAATACCCCCCTGAGCCAGATTACCCCCCTGAGCCAGAATAC CCTGTTCCCGAAGAACAGCCCCCTGAGCCAGATTACCCCCCTGAGCCAGA ATACCCTGTTCCCGAAGAACAGCCCCCTGAGCCAGAATACCCCCCTGAGC CAGATTACACTGTTTCCGAAGAACAGCCTTTCGGCAAGATGGTGTCTGGA CCTAGTGTCTCTATCACAGAGCTCCCCGAGGACATTCGTCTATATATTAA CTGGACAAACTTGGGAATAGAAGAAAGGAAGCGAAGAAAGAAAATTCTTA AGCAGAAAAACTTTCCAGTTCCACATCGTGATGGTACCTTTTCTTGATCT ATACGAACGTCCTGTTATAAAACTTCGCATCGGACAGAAGGAGTATTCTA TATTGGAAGGTTACCTCAGTGATTACCCTCGGCTGCGAAGTAATGTCGGT TTTCATTCACGGATTACGCTTTCAGATATCGACGAGGACATTGGACATAC CTTTGTCCACTTCATATATACCAGGGAGTATGAAACTCTTAAACCTACTC CCAACCCGGGTATACATGATTTGCCAAGGGAATTTAGAAGGAGTGTCCAA GTCTACCGTGCGGCCATGGTCTATGAGATACATGGTCTAGAGGTACTTGC TAAGAAGTATATCCAAATTCTCGGCGAATCAATTCCCATTTTCGATGTAC TAGAGGCCACCAGAATGATATTTTCAAAACTCCCAGATAATGGAATCTGG TTACGTGAATATATCTACACAAAGCTTAAGAAGGCGTTTGTGCTAGATGA AACGATATTCACATGTGGTGGGATTTACCAGGGATTTGCGGAGGACCGCC CTTTTGAGAAAGAGTTGATGAGGATGATGGCCGATATCTATTCTGACACC ATATCCTCGCTTCGTTCTGAAGGCCAGAGAAGCCAAAAAGAACAGATAAT CCCACAGAAAGATGGCAAAAAAAGGCACCAAGAAGAAGAGTGTGAAACAG GCCTTGGAGCCTCGGGTGTGCTCGGTGATTGATTACAACCAGCCAGAATC ATCTTGAGCCGTCAACTGAATATCCTGTTCCCGAAGAACAGCCATCTGAG CCAGAATGTCCCCTTGAGCCAGAATATCCCCCTGAGCCAGAATACCCCCC TGAGCCAGAATACCCTGTTCCCGAAGAACAGCCCCCTGAGCCAGAATATC CCCCTGAGCCAGAATACCCCCCTGAGCCAGATTACCCCCCTGAGCCAGAA TACCCTGTTCCCGAAGAACAGCCCCCTGAGCCAGATTACCCCCCTGAGCC AGAATACCCTGTTCCCGAAGAACAGCCCCCTGAGCCAGAATACCCCCCTG AGCCAGATTACACTGTTTCCGAAGAACAGCCTTTCGGCAAGATGGTGTCT GGACCTAGTGTCTCTATCACAGAGCTCCCCGAGGACATTCGTCTATATAT TAACTGGACAAACTTGGGAATAGAAGAAAGGAAGCGAAGAAAGAAAATTC TTAAGCAGAAAAACTTTCCAGTTCCACATCGTGATGGTACCTTTTCTTGA TCTATACGAACGTCCTGTTATAAAACTTCGCATCGGACAGAAGGAGTATT CTATATTGGAAGGTTACCTCAGTGATTACCCTCGGCTGCGAAGTAATGTC GGTTTTCATTCACGGATTACGCTTTCAGATATCGACGAGGACATTGGACA TACCTTTGTCCACTTCATATATACCAGGGAGTATGAAACTCTTAAACCTA CTCCCAACCCGGGTATACATGATTTGCCAAGGGAATTTAGAAGGAGTGTC CAAGTCTACCGTGCGGCCATGGTCTATGAGATACATGGTCTAGAGGTACT TGCTAAGAAGTATATCCAAATTCTCGGCGAATCAATTCCCATTTTCGATG TACTAGAGGCCACCAGAATGATATTTTCAAAACTCCCAGATAATGGAATC TGGTTACGTGAATATATCTACACAAAGCTTAAGAAGGCGTTTGTGCTAGA TGAAACGATATTCACATGTGGTGGGATTTACCAGGGATTTGCGGAGGACC GCCCTTTTGAGAAAGAGTTGATGAGGATGATGGCCGATATCTATTCTGAC ACCATATCCTCGCTTCGTTCTGAAGGCCAGAGAAGCCAAAAAGAACAGAT AATCCCACAGAAAGATGGCAAAAAAAGGCACCAAGAAGAAGAGTGTGAAA CAGGCCTTGGAGCCTCGGGTGTGCTCGGTGATTGATTACAACCAGCCAGA ATCATCTTGAGCCGTCAACTGAATATCCTGTTCCCGAAGAACAGCCATCT GAGCCAGAATGTCCCCTTGAGCCAGAATATCCCCCTGAGCCAGAATACCC CCCTGAGCCAGAATACCCTGTTCCCGAAGAACAGCCCCCTGAGCCAGAAT ATCCCCCTGAGCCAGAATACCCCCCTGAGCCAGATTACCCCCCTGAGCCA GAATACCCTGTTCCCGAAGAACAGCCCCCTGAGCCAGATTACCCCCCTGA GCCAGAATACCCTGTTCCCGAAGAACAGCCCCCTGAGCCAGAATACCCCC CTGAGCCAGATTACACTGTTTCCGAAGAACAGCCTTTCGGCAAGATGGTG TCTGGACCTAGTGTCTCTATCACAGAGCTCCCCGAGGACATTCGTCTATA TATTAACTGGACAAACTTGGGAATAGAAGAAAGGAAGCGAAGAAAGAAAA TTCTTAAGCAGAAAAACTTTCCAGTTCCACATCGTGATGGTACCTTTTCT TGATCTATACGAACGTCCTGTTATAAAACTTCGCATCGGACAGAAGGAGT ATTCTATATTGGAAGGTTACCTCAGTGATTACCCTCGGCTGCGAAGTAAT GTCGGTTTTCATTCACGGATTACGCTTTCAGATATCGACGAGGACATTGG ACATACCTTTGTCCACTTCATATATACCAGGGAGTATGAAACTCTTAAAC CTACTCCCAACCCGGGTATACATGATTTGCCAAGGGAATTTAGAAGGAGT GTCCAAGTCTACCGTGCGGCCATGGTCTATGAGATACATGGTCTAGAGGT ACTTGCTAAGAAGTATATCCAAATTCTCGGCGAATCAATTCCCATTTTCG ATGTACTAGAGGCCACCAGAATGATATTTTCAAAACTCCCAGATAATGGA ATCTGGTTACGTGAATATATCTACACAAAGCTTAAGAAGGCGTTTGTGCT AGATGAAACGATATTCACATGTGGTGGGATTTACCAGGGATTTGCGGAGG ACCGCCCTTTTGAGAAAGAGTTGATGAGGATGATGGCCGATATCTATTCT GACACCATATCCTCGCTTCGTTCTGAAGGCCAGAGAAGCCAAAAAGAACA GATAATCCCACAGAAAGATGGCAAAAAAAGGCACCAAGAAGAAGAGTGTG AAACAGGCCTTGGAGCCTCGGGTGTGCTCGGTGATTGATTACAACCAGCC AGAATCATC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_013010-T1.utr3p1 | KJC3_013010-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_013010-T1.utr5p1 | KJC3_013010-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch3 | supercontig | ch3:561529..563191 - |
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