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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:561529..563191- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013010-T1 ID=KJC3_013010-T1|Name=KJC3_013010-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1663bp|location=Sequence derived from alignment at ch3:561529..563191- (Aspergillus niger KJC3)
GTTGCTAGTTATCTCTAATATCACTGCAACCAATCCACACGACAATGGCA
AAAAAAGGCACCAAGAAGAAGAGTGTGAAACAGGCCTTGGAGCCTCGGGT
GTGCTCGGTGATTGATTACAACCAGCCAGAATCATCGTAAGGACTCATAT
AGCCAAGACGCATCATCTTCTGGATAACTAACTCCATATGACAATGTAGT
CTATACGAACGTCCTGTTATAAAACTTCGCATCGGACAGAAGGAGTATTC
TATATTGGAAGGTTACCTCAGTGATTACCCTCGGCTGCGAAGTAATGTCG
GTTTTCATTCACGGATTACGCTTTCAGATATCGACGAGGACATTGGACAT
ACCTTTGTCCACTTCATATATACCAGGGAGTATGAAACTCTTAAACCTAC
TCCCAACCCGGGTATACATGATTTGCCAAGGGAATTTAGAAGGAGTGTCC
AAGTCTACCGTGCGGCCATGGTCTATGAGATACATGGTCTAGAGGTACTT
GCTAAGAAGTATATCCAAATTCTCGGCGAATCAATTCCCATTTTCGATGT
ACTAGAGGCCACCAGAATGATATTTTCAAAACTCCCAGATAATGGAATCT
GGTTACGTGAATATATCTACACAAAGCTTAAGAAGGCGTTTGTGCTAGAT
GAAACGATATTCACATGTGGTGGGATTTACCAGGGATTTGCGGAGGACCG
CCCTTTTGAGAAAGAGTTGATGAGGATGATGGCCGATATCTATTCTGACA
CCATATCCTCGCTTCGTTCTGAAGGCCAGAGAAGCCAAAAAGAACAGATA
ATCCCACAGAAAGGTAAGTAACTCAAATACTGGAGATAGCTAATAGAGTG
GTCCGCTGACTGACTGAGACCCTACAGTTGAGCCGTCAACTGAATATCCT
GTTCCCGAAGAACAGCCATCTGAGCCAGAATGTCCCCTTGAGCCAGAATA
TCCCCCTGAGCCAGAATACCCCCCTGAGCCAGAATACCCTGTTCCCGAAG
AACAGCCCCCTGAGCCAGAATATCCCCCTGAGCCAGAATACCCCCCTGAG
CCAGATTACCCCCCTGAGCCAGAATACCCTGTTCCCGAAGAACAGCCCCC
TGAGCCAGATTACCCCCCTGAGCCAGAATACCCTGTTCCCGAAGAACAGC
CCCCTGAGCCAGAATACCCCCCTGAGCCAGATTACACTGTTTCCGAAGAA
CAGCCTTTCGGCAAGATGGTGTCTGGACCTAGTGTCTCTATCACAGAGCT
CCCCGAGGACATTCGTCTATATATTAACTGGACAAACTTGGGAATAGAAG
AAAGGAAGCGAAGAAAGAAAATTCTTAAGCAGAAAAACTTTCCAGTTCCA
CATCGTGATGGTACCTTTTCTTGAAGATTTGGTCTTTCAGCAGGGCTCCA
ATGAGCTGTTACTGTATTCAACATACAGTAAATAACACCCGATCATGTTG
AGCGCTTCTCAAATATTCCTTTCCACTTGTTGGTTGTGACTATTGGACTA
TTAACTAGTCTCATCAGAGGTCAATCAGAAACCATTACATGTCATTTTAG
CTAAACTTGAACGCTTAACGTAGAACATGGCATGTTTATCCATGCCCAGT
CTCTACATAACCCGCAGTTGTAGCGCGGCGGGCAGCAAATTGCAATATAA
TCGTCTATCCTGT back to topCoding sequence (CDS) from alignment at ch3:561529..563191- >KJC3_013010-T1 ID=KJC3_013010-T1|Name=KJC3_013010-T1|organism=Aspergillus niger KJC3|type=CDS|length=3609bp|location=Sequence derived from alignment at ch3:561529..563191- (Aspergillus niger KJC3)
TTGAGCCGTCAACTGAATATCCTGTTCCCGAAGAACAGCCATCTGAGCCA
GAATGTCCCCTTGAGCCAGAATATCCCCCTGAGCCAGAATACCCCCCTGA
GCCAGAATACCCTGTTCCCGAAGAACAGCCCCCTGAGCCAGAATATCCCC
CTGAGCCAGAATACCCCCCTGAGCCAGATTACCCCCCTGAGCCAGAATAC
CCTGTTCCCGAAGAACAGCCCCCTGAGCCAGATTACCCCCCTGAGCCAGA
ATACCCTGTTCCCGAAGAACAGCCCCCTGAGCCAGAATACCCCCCTGAGC
CAGATTACACTGTTTCCGAAGAACAGCCTTTCGGCAAGATGGTGTCTGGA
CCTAGTGTCTCTATCACAGAGCTCCCCGAGGACATTCGTCTATATATTAA
CTGGACAAACTTGGGAATAGAAGAAAGGAAGCGAAGAAAGAAAATTCTTA
AGCAGAAAAACTTTCCAGTTCCACATCGTGATGGTACCTTTTCTTGATCT
ATACGAACGTCCTGTTATAAAACTTCGCATCGGACAGAAGGAGTATTCTA
TATTGGAAGGTTACCTCAGTGATTACCCTCGGCTGCGAAGTAATGTCGGT
TTTCATTCACGGATTACGCTTTCAGATATCGACGAGGACATTGGACATAC
CTTTGTCCACTTCATATATACCAGGGAGTATGAAACTCTTAAACCTACTC
CCAACCCGGGTATACATGATTTGCCAAGGGAATTTAGAAGGAGTGTCCAA
GTCTACCGTGCGGCCATGGTCTATGAGATACATGGTCTAGAGGTACTTGC
TAAGAAGTATATCCAAATTCTCGGCGAATCAATTCCCATTTTCGATGTAC
TAGAGGCCACCAGAATGATATTTTCAAAACTCCCAGATAATGGAATCTGG
TTACGTGAATATATCTACACAAAGCTTAAGAAGGCGTTTGTGCTAGATGA
AACGATATTCACATGTGGTGGGATTTACCAGGGATTTGCGGAGGACCGCC
CTTTTGAGAAAGAGTTGATGAGGATGATGGCCGATATCTATTCTGACACC
ATATCCTCGCTTCGTTCTGAAGGCCAGAGAAGCCAAAAAGAACAGATAAT
CCCACAGAAAGATGGCAAAAAAAGGCACCAAGAAGAAGAGTGTGAAACAG
GCCTTGGAGCCTCGGGTGTGCTCGGTGATTGATTACAACCAGCCAGAATC
ATCTTGAGCCGTCAACTGAATATCCTGTTCCCGAAGAACAGCCATCTGAG
CCAGAATGTCCCCTTGAGCCAGAATATCCCCCTGAGCCAGAATACCCCCC
TGAGCCAGAATACCCTGTTCCCGAAGAACAGCCCCCTGAGCCAGAATATC
CCCCTGAGCCAGAATACCCCCCTGAGCCAGATTACCCCCCTGAGCCAGAA
TACCCTGTTCCCGAAGAACAGCCCCCTGAGCCAGATTACCCCCCTGAGCC
AGAATACCCTGTTCCCGAAGAACAGCCCCCTGAGCCAGAATACCCCCCTG
AGCCAGATTACACTGTTTCCGAAGAACAGCCTTTCGGCAAGATGGTGTCT
GGACCTAGTGTCTCTATCACAGAGCTCCCCGAGGACATTCGTCTATATAT
TAACTGGACAAACTTGGGAATAGAAGAAAGGAAGCGAAGAAAGAAAATTC
TTAAGCAGAAAAACTTTCCAGTTCCACATCGTGATGGTACCTTTTCTTGA
TCTATACGAACGTCCTGTTATAAAACTTCGCATCGGACAGAAGGAGTATT
CTATATTGGAAGGTTACCTCAGTGATTACCCTCGGCTGCGAAGTAATGTC
GGTTTTCATTCACGGATTACGCTTTCAGATATCGACGAGGACATTGGACA
TACCTTTGTCCACTTCATATATACCAGGGAGTATGAAACTCTTAAACCTA
CTCCCAACCCGGGTATACATGATTTGCCAAGGGAATTTAGAAGGAGTGTC
CAAGTCTACCGTGCGGCCATGGTCTATGAGATACATGGTCTAGAGGTACT
TGCTAAGAAGTATATCCAAATTCTCGGCGAATCAATTCCCATTTTCGATG
TACTAGAGGCCACCAGAATGATATTTTCAAAACTCCCAGATAATGGAATC
TGGTTACGTGAATATATCTACACAAAGCTTAAGAAGGCGTTTGTGCTAGA
TGAAACGATATTCACATGTGGTGGGATTTACCAGGGATTTGCGGAGGACC
GCCCTTTTGAGAAAGAGTTGATGAGGATGATGGCCGATATCTATTCTGAC
ACCATATCCTCGCTTCGTTCTGAAGGCCAGAGAAGCCAAAAAGAACAGAT
AATCCCACAGAAAGATGGCAAAAAAAGGCACCAAGAAGAAGAGTGTGAAA
CAGGCCTTGGAGCCTCGGGTGTGCTCGGTGATTGATTACAACCAGCCAGA
ATCATCTTGAGCCGTCAACTGAATATCCTGTTCCCGAAGAACAGCCATCT
GAGCCAGAATGTCCCCTTGAGCCAGAATATCCCCCTGAGCCAGAATACCC
CCCTGAGCCAGAATACCCTGTTCCCGAAGAACAGCCCCCTGAGCCAGAAT
ATCCCCCTGAGCCAGAATACCCCCCTGAGCCAGATTACCCCCCTGAGCCA
GAATACCCTGTTCCCGAAGAACAGCCCCCTGAGCCAGATTACCCCCCTGA
GCCAGAATACCCTGTTCCCGAAGAACAGCCCCCTGAGCCAGAATACCCCC
CTGAGCCAGATTACACTGTTTCCGAAGAACAGCCTTTCGGCAAGATGGTG
TCTGGACCTAGTGTCTCTATCACAGAGCTCCCCGAGGACATTCGTCTATA
TATTAACTGGACAAACTTGGGAATAGAAGAAAGGAAGCGAAGAAAGAAAA
TTCTTAAGCAGAAAAACTTTCCAGTTCCACATCGTGATGGTACCTTTTCT
TGATCTATACGAACGTCCTGTTATAAAACTTCGCATCGGACAGAAGGAGT
ATTCTATATTGGAAGGTTACCTCAGTGATTACCCTCGGCTGCGAAGTAAT
GTCGGTTTTCATTCACGGATTACGCTTTCAGATATCGACGAGGACATTGG
ACATACCTTTGTCCACTTCATATATACCAGGGAGTATGAAACTCTTAAAC
CTACTCCCAACCCGGGTATACATGATTTGCCAAGGGAATTTAGAAGGAGT
GTCCAAGTCTACCGTGCGGCCATGGTCTATGAGATACATGGTCTAGAGGT
ACTTGCTAAGAAGTATATCCAAATTCTCGGCGAATCAATTCCCATTTTCG
ATGTACTAGAGGCCACCAGAATGATATTTTCAAAACTCCCAGATAATGGA
ATCTGGTTACGTGAATATATCTACACAAAGCTTAAGAAGGCGTTTGTGCT
AGATGAAACGATATTCACATGTGGTGGGATTTACCAGGGATTTGCGGAGG
ACCGCCCTTTTGAGAAAGAGTTGATGAGGATGATGGCCGATATCTATTCT
GACACCATATCCTCGCTTCGTTCTGAAGGCCAGAGAAGCCAAAAAGAACA
GATAATCCCACAGAAAGATGGCAAAAAAAGGCACCAAGAAGAAGAGTGTG
AAACAGGCCTTGGAGCCTCGGGTGTGCTCGGTGATTGATTACAACCAGCC
AGAATCATC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013010-T1.utr3p1 | KJC3_013010-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013010-T1.utr5p1 | KJC3_013010-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:561529..563191 - |
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