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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:914653..917930+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013022-T1 ID=KJC3_013022-T1|Name=KJC3_013022-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3278bp|location=Sequence derived from alignment at ch3:914653..917930+ (Aspergillus niger KJC3)
TGGTATTTGATACTTATCACACTATTCTAACGGCAATACATTAGGTCTGA
CACCTTCATCATGATATGATATATATTCACACTCACTCCTGCGTTCACAT
TGACGTTACTTAGTTTGCCTCAGACGTTGGTTCTGCCAACCCCTCTAGCC
ATTTGTCGCCCAGAAATGCTCGTTAGATCTCCAATAATCTCTCACCCCTA
ACTAACCATGAACTGGAAGCATGAATTGGCGTTTTCTTACTGTCCTGTAG
CGGGATGCGTACGGGTTTTCCGGGTTGGGTCGGGTTTGGGGGTACCCGCG
GGTTGACTGACGCGCAATAAATTGATAGGTCACAAAACAACAACGCGACC
AAAAAAAGTAAAAAGAAGAGACATCTTCGCTATTTATCATGAATCCTCAT
TCAAAGCACGATAAGGAGGCATGGCCATGGCCTCTACCACTTCGTGCTCA
TCGAGATCGATGTCTCATACATTCAGCCCAGCGCTTTCGATTGAGCCATC
ATCCGATTCATTCCCAGACTCAGACTTCCAAATATCGGTAAAGCTTCTTC
AGCCAACGCTCTTGGTCTTCTGCTGAAAACGTAGTAGCCTTTTCCACATT
CCAGCGAGAGTCTGGATGTCCTTGCCGACAAGCCTCCACCAACCCTGAGA
CGCGTCGGATCTGACCGCAGAAAAAATTGGCTTCTTTTCGAGCCAGCCCA
AGAGGATGACTTCCTAAGTTGGTGGCTCGACACTGAATATGGTCGACAAA
TGAACAGACACGGACGTGCCCGGATCAGATGGTCGGTTGAGTCCCATTCC
GCTGAAGTCTGGAAGCAGTTCGACCAAGTGGCGGAGATACATTCAGGACG
ACCAAAAGTTATCTGCCGTAACTGCATGACGTTGCTAGATCACCCGCAAC
ACAAATCACACGGGACAAGCGCAATGGGCAAACATCAGAGATCTAGCTCC
TGCCGCAAGGGAAAGAAAAAGGTCTCACAGCAATCTCTTATCTCGGATTC
CATCCAGAGGACCCCAGTTTCTAGTTCTAGCCCAAACAAGTTCACGAAAG
CGCAACTCGAGGAACAGCTCCTGAAAACTATAACGTGCTTGCGGCTTCCC
TTCCAAATTGTGGAAGATAATGAATTCCAGAGACTGCTCAACTTGGTCCG
CTCTGGGCCCCAAGGAGTGGAACTTCCCTCTGCAAAGACACTCCGTCGGA
GACTGCGTGAAGCTGTTGTTACCCAACAAGAAATGCAACTGAGAGATCTT
CCTGAAGATGCGAAAGTTTCTCTCGCCTTGGACTGTTGGACCAGCCCATT
CCAGCAAGCATTCATGGCTATCACAGTCTATTTCATTGATAAAGAGTGGA
ATTATAGAGAGTTGCTCCTTGGTTTCGAGCCTCTGCACGGTCCTCATTCA
GGGGTTAATCTGAGCGACGTCCTGCTTCAGTTACTGCGGGAACGGCATCT
TTTGAGTCGAATCTTCAGCGTAACCACTGACAATGCGACAAACAACGAGA
CTTTGGTCCGAGCGCTGCAAGAGACGCTTCTTTCCACTGGCGCGATCCGT
TCTCGGGACTCTATTATCCGGGTTCCATGCATGGCGCATGTCATCCAGCT
TTGTCTAAAGCGGCTTCTGGGGCATATCAAAGCAGCGCCTCAGAATAAAG
AAGTGGCAAATGTATGGTCAGACTCACAGATGAGTTATCTCAGAAGTTCG
GCTGATCATGAGGGCGTGGCTAGCACACTCGGAAAGGTCTGTTTTCTGTT
ATCTGGTTGATAGAAAGGACGGAGCTAATGGGGTCTTCCAATAGATCAGG
TCGTTTGCTACCTTTGTTAATGCAAGTCCCCAACGGCGGGATGCGTTCCT
GTGTCTTCAGTCAGGTCGGACTCGACTATTTCCAATCCACGATGTGCAAA
CACGCTGGAACTCGACGTTCTTGATGCTCCGGCGGGCGCGCAAGTTGCGA
AACTATATTGATAAATACTGCAATGACCATGACTACTCGCAATTCAGCAT
CACTGATGATGGATGGCGACAGATTGATTACCTCCTGCAATTGACCAAGC
CATTCTTTCAGTTCACCATGGCCCTCATGAAGACAAAAGATGTCACGATC
CACAGTGTGTTTCTCGTCTACAGAAAGCTGCTGGAACACATCGAACGGTC
AAATCAACGCTTAAGCAACAAGACAACGCCATGGAAGCGGGCCATGTATG
ATGCATTGCTTGCTGCGAAGCAAAAGTTAAAAGAATATTATGAAAAGACC
TATCGCGATCATGGGTTTCTTTATGGTACAGGAACCTTGCTCGCACCGCA
GTACAAACTCTGCGCCTTTGATGACACGGAATATTCTAAATGCCAGAGCG
AAACATCCAAACGCTACTGTGATTACTTGAGGAATTGCTTTGCACAGTAC
AAACGCGAGACGCCCGAGATGTCGTTTCGGCCGATGCATTCCTCTTGTCC
ACAGCAGGCGTCAGAGTTGGACCGGCTCCTCACCCCACTGAGTACTTCCC
AGCTGAGTGCAAGAAGCGAATACGACGAAGTAGACCGATATTTGAGAGAG
GGTGAGCGAAGACCCTGAGATAATTGTTGCCTCATGGCAAGCTGACTTCC
GCAGGAACCGTCCAGCTGCCGCCGCGAGCCTATTGGAAAGAGCACGAACA
TGAATACCCCGTTCTGTCGCGACTTGCTCGCGACTTGCTTTCCGTTCCGG
CCACTGGCGCTGGTGTCGAGCGTCTATTCAACACTGCGCGAGATATCTGC
CACTATCGTCGTGGGTCGCTCAATGAATCGACCATTCAAGACCTAATAAT
GTACAAGTGCTCAGAGATATTTAACCTGGACATTGAGACGTTGAGCTGCC
TTGAAAAATCATCGATTGAGGACGTCGATCAAGAGAGGCTCGAGGAGGAG
GAAGCCATCAAAACAAGTAAAGAAGAATTTGATCCAATCAGTGATGACGA
AGAGGGAGCAATTGAAGACGACGGCCGCGTACTTTCCGCTGGAGATGTAA
CAAGCCGAGAATGTATGATGTCAGATGTTTCTCCCACGCATGACATCCAC
GAACAAGATGACGAGGAAGATGACGGGGAGAAGGAGCAGAACGAGGAGGA
GGCTACTGACGATGAATTGCTTCCACCCCCAATTCAGCAGCTCCGCGACA
GATCTCAAAAAAGGTCCTCAGGGAGGGTCACAGTGCCATCTAGTAGACTA
CAAGGTTACGAATTGTATTAGGGCGGGTCACGAATGTATAGAGTATTAAT
ATCACAATCACTTCATGAATTTCTTCGC back to topCoding sequence (CDS) from alignment at ch3:914653..917930+ >KJC3_013022-T1 ID=KJC3_013022-T1|Name=KJC3_013022-T1|organism=Aspergillus niger KJC3|type=CDS|length=2580bp|location=Sequence derived from alignment at ch3:914653..917930+ (Aspergillus niger KJC3)
ATGGCCATGGCCTCTACCACTTCGTGCTCATCGAGATCGATGTCTCATAC
ATTCAGCCCAGCGCTTTCGATTGAGCCATCATCCGATTCATTCCCAGACT
CAGACTTCCAAATATCGCCTTTTCCACATTCCAGCGAGAGTCTGGATGTC
CTTGCCGACAAGCCTCCACCAACCCTGAGACGCGTCGGATCTGACCGCAG
AAAAAATTGGCTTCTTTTCGAGCCAGCCCAAGAGGATGACTTCCTAAGTT
GGTGGCTCGACACTGAATATGGTCGACAAATGAACAGACACGGACGTGCC
CGGATCAGATGGTCGGTTGAGTCCCATTCCGCTGAAGTCTGGAAGCAGTT
CGACCAAGTGGCGGAGATACATTCAGGACGACCAAAAGTTATCTGCCGTA
ACTGCATGACGTTGCTAGATCACCCGCAACACAAATCACACGGGACAAGC
GCAATGGGCAAACATCAGAGATCTAGCTCCTGCCGCAAGGGAAAGAAAAA
GGTCTCACAGCAATCTCTTATCTCGGATTCCATCCAGAGGACCCCAGTTT
CTAGTTCTAGCCCAAACAAGTTCACGAAAGCGCAACTCGAGGAACAGCTC
CTGAAAACTATAACGTGCTTGCGGCTTCCCTTCCAAATTGTGGAAGATAA
TGAATTCCAGAGACTGCTCAACTTGGTCCGCTCTGGGCCCCAAGGAGTGG
AACTTCCCTCTGCAAAGACACTCCGTCGGAGACTGCGTGAAGCTGTTGTT
ACCCAACAAGAAATGCAACTGAGAGATCTTCCTGAAGATGCGAAAGTTTC
TCTCGCCTTGGACTGTTGGACCAGCCCATTCCAGCAAGCATTCATGGCTA
TCACAGTCTATTTCATTGATAAAGAGTGGAATTATAGAGAGTTGCTCCTT
GGTTTCGAGCCTCTGCACGGTCCTCATTCAGGGGTTAATCTGAGCGACGT
CCTGCTTCAGTTACTGCGGGAACGGCATCTTTTGAGTCGAATCTTCAGCG
TAACCACTGACAATGCGACAAACAACGAGACTTTGGTCCGAGCGCTGCAA
GAGACGCTTCTTTCCACTGGCGCGATCCGTTCTCGGGACTCTATTATCCG
GGTTCCATGCATGGCGCATGTCATCCAGCTTTGTCTAAAGCGGCTTCTGG
GGCATATCAAAGCAGCGCCTCAGAATAAAGAAGTGGCAAATGTATGGTCA
GACTCACAGATGAGTTATCTCAGAAGTTCGGCTGATCATGAGGGCGTGGC
TAGCACACTCGGAAAGGTCTGTTTTCTGTTATCTGGTTGAATGGCCATGG
CCTCTACCACTTCGTGCTCATCGAGATCGATGTCTCATACATTCAGCCCA
GCGCTTTCGATTGAGCCATCATCCGATTCATTCCCAGACTCAGACTTCCA
AATATCGCCTTTTCCACATTCCAGCGAGAGTCTGGATGTCCTTGCCGACA
AGCCTCCACCAACCCTGAGACGCGTCGGATCTGACCGCAGAAAAAATTGG
CTTCTTTTCGAGCCAGCCCAAGAGGATGACTTCCTAAGTTGGTGGCTCGA
CACTGAATATGGTCGACAAATGAACAGACACGGACGTGCCCGGATCAGAT
GGTCGGTTGAGTCCCATTCCGCTGAAGTCTGGAAGCAGTTCGACCAAGTG
GCGGAGATACATTCAGGACGACCAAAAGTTATCTGCCGTAACTGCATGAC
GTTGCTAGATCACCCGCAACACAAATCACACGGGACAAGCGCAATGGGCA
AACATCAGAGATCTAGCTCCTGCCGCAAGGGAAAGAAAAAGGTCTCACAG
CAATCTCTTATCTCGGATTCCATCCAGAGGACCCCAGTTTCTAGTTCTAG
CCCAAACAAGTTCACGAAAGCGCAACTCGAGGAACAGCTCCTGAAAACTA
TAACGTGCTTGCGGCTTCCCTTCCAAATTGTGGAAGATAATGAATTCCAG
AGACTGCTCAACTTGGTCCGCTCTGGGCCCCAAGGAGTGGAACTTCCCTC
TGCAAAGACACTCCGTCGGAGACTGCGTGAAGCTGTTGTTACCCAACAAG
AAATGCAACTGAGAGATCTTCCTGAAGATGCGAAAGTTTCTCTCGCCTTG
GACTGTTGGACCAGCCCATTCCAGCAAGCATTCATGGCTATCACAGTCTA
TTTCATTGATAAAGAGTGGAATTATAGAGAGTTGCTCCTTGGTTTCGAGC
CTCTGCACGGTCCTCATTCAGGGGTTAATCTGAGCGACGTCCTGCTTCAG
TTACTGCGGGAACGGCATCTTTTGAGTCGAATCTTCAGCGTAACCACTGA
CAATGCGACAAACAACGAGACTTTGGTCCGAGCGCTGCAAGAGACGCTTC
TTTCCACTGGCGCGATCCGTTCTCGGGACTCTATTATCCGGGTTCCATGC
ATGGCGCATGTCATCCAGCTTTGTCTAAAGCGGCTTCTGGGGCATATCAA
AGCAGCGCCTCAGAATAAAGAAGTGGCAAATGTATGGTCAGACTCACAGA
TGAGTTATCTCAGAAGTTCGGCTGATCATGAGGGCGTGGCTAGCACACTC
GGAAAGGTCTGTTTTCTGTTATCTGGTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013022-T1.utr5p1 | KJC3_013022-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR037220 |
| DBxref | PFAM:PF05699 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:914653..917930 + |
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