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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1096541..1100975- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013030-T1 ID=KJC3_013030-T1|Name=KJC3_013030-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4435bp|location=Sequence derived from alignment at ch3:1096541..1100975- (Aspergillus niger KJC3)
CCTCCGTCGTCGTCGCCCCGTCGCCTCATCGCCCATCCCATTCGCCCGAC
GCACAGCCCCCTTCGGTCGTGCCGTGCGATCCGGTGCCGTTTTTCTGGAA
GTGCCTCCACCGTGCGAATTTGCAGCCGACATGGATTTGTGTGAGCCTTG
GCCGGGATCGCGATCCCCCCCCCTACATCGTTATGATTGATCTGTTCGTT
ATCTTCCTACCTACATGGAACGCTTACCAGTCGACTTACTATCTTCGTCG
CTGAGGTCGGTCTTCGAATCGCCATCCAAGACCGCTCTGGTTCTCTCAGT
ATGGCCCATCTGAATGCCCCCCCAAATCCTCTGTTTTCATTTCATCTCGC
TACCCCCGGCTCAGCTCGGGTCTCCGTGTTCAGGGAAACGACCCACTTGG
CGTGCTGCGCAGCCATCATGCTGATGTGCCTGAAATTTGCGTCGATCCTC
CACTGGCCGTGGGCTCGACCGCCCTTCGCCGATGTGACCCTGTGACAGTA
CGACACTTACCTGCCTCAGCTGGCGCGGGCGACCAATAGCGAAAACCCCG
CACTACTTTGCCCGAAATTGCTTCGGGACGCGAGGCACAATCCGGCCATG
GGCGGCCAATGGCGAAAATCACGCATTCCCATCCTCACCCTGCCTTGTCT
CGAGATGCGAGGCACAGCCCGATCAGGTAGCGTGCTTGGAAGATGCATGG
ATTGGCCTAGACCGGGAATGAACAACCGTGAAGGATCGCCATTGGCCTTC
ATACTCTGAATGAGGCAGCTGACCTTGGAGGAGAAAGTGGAGGTAGTCAG
CCGGGCGAGGGGTGGGGGGTGAACGATGCCGTCTTGGACGAAAGCTGACA
TGCAATCGCGCAACCGGGACGGGATAAAATCAAACGCACGTAGTAGAGCC
TTCCTCGAATGTGGCTGTTCTTGCGTGGCATGGGCACGGCCCTCAACCGG
GGAGCAAGAAATTCAGCGCGGCGGGTTTGGTGTCTCACCAGATTTCAAGG
ACTAGCGTTGTCTAGAGCTTCCGTTGCCTATAAAAGGGCTGACGAATTCC
CAGGGAATGTAGCTCAAAAGATCACTCACTTCCCAGCCGAGCACAGCCCG
AAACCCATCCCTATTCACTCACAACTACGCGTTCTTACCCCCCGTTCCTC
TGTTCCGTCCATTTTCTGAACCCCACCATTCACTGCCCTAGGTCAGCATA
ATGTTCAGCTTCCATGTTGATAGCTTCAGACCTTGGAAAGCCCCTGCCCC
CACCAATACAAGCACATCCACCTCCCAGAGCCCCAAAAGATCCCCTGTCC
CTGCTGCTGTCAATACTATTCCTGCAACCGATACAAGGCCCGTCAGTCAC
TGCCACGAGAAAGGCTTGCCAACTCCCCGAAATCGGCCAAACGAACATCC
ACTTCCCGCTCGTCCACCAGCTGAAGTGTGTGCTCATGCCAACATGCGCT
CCAGCACCGTACCTCGTTCTCCCTATCAATATCTCTCGAGTCCCCAGCCT
GCTTTCAAGGTTGAGGATACGATCCAGCCTACCTTCACCACAGAGCTTCA
CTTCTCATCTCCGACATCTCTCCAACCCTCGGCTGCTCTAGAGGGCTCGA
AAAGGGATACCGAATTCCAACCCAAAATTCGAGCGGACCTACTCTTCCGA
GATGGCATCCGTGCAGGTGATACGCACAATAGCTGCATGGGTATTTACGA
TAAGGGCTCTAAAACCCTCGACGCACCGAACACTTTGCCGGTTGGCTTAG
AAGAAACCATGTTAAATGAAGATTTCATGGAGACCAGTCAGCCACGTCAG
ACTACCAACGATACTTATCTGTTCACTATGGATGAGTTACAAGCCGATTC
GCCTTATGTCGACGTTTCGCTGGATTCACCACCCCTACGTGAGCATAAAC
AGGATTTCGGCGAATCACCTCTCAACGGTTATGACATGAACTGTCTGGCT
GGATCTTTTCGGAATCAAAGCACGCATCAGAATCCCACTCCACATGGCTA
TGAGACTAGCGCGAGACAAAACGGCAGCGAGGAAAAAGGTGGTTGTAGCG
AAAAATTAACAGCCTGCAAGCGAAACTCTATCGAAGTTGAGCCAGAAATG
CTACCGCCCAAACGTCTCAAAACGGACCAATCCTCGAAATCTCTCAGTAC
CGGCACCGCGGATAATCGCCTTGGAGACTCTTCAATCCATTTTAGTGCCA
CAAATACTGTTCCCATCAACTCAGTGACCCTCTCACCTGATGAAGATCAT
CAGAGAGCTAACAGTACATCTCAAGTCGCTCAGCGTGCTAACACCGGCAC
AAGCGATCAAGGGGCACTCCGTGTCCGTCGCAGTTGTTCACTCAACCTAC
GATCTGCACAAACCCATTCCGTGAGTGCCGATGAAAACGGTGTCAAGCAA
AAACCCGCCCATGACCAGAACGCGCATCAACCCAGGCGGAGTGTTCGCCT
AAAACCTCAAGTCGTGGTGGAATCGGATGGTCCAGATAGCACCCCAACAA
AGCCTACTCTGTCAAACTCCGACAAGCGCCCGGCACAGCGGATTAAACCA
AGAAAGCCAAGAGGGCGACCTGCCAAGAAGGCATCAACCGCAAAGGCTAC
ACCACGCGAGAATGAATACAAATTCACGTCCCTCCGTTCGCACTTCCTGT
CAACGCCGCTCGACATGCGTTTGCAATTTGTCTCGTGGTTATTCGAGGCT
GTGCTACCTCGCTGCATGCACGATTCCAAGGCTGTCACCAACAGTCCATC
TCAGGTGTGCAATGCGGGTAGTGAAGAAGAATGGGAAGTAGAGGAGGTAG
TAGCCTCGCGAGTCTTCCGCGGGAGGCTTCAATACCAAGTACGGTGGAAA
GGATATGATTCTGACGAGACTTGGTATCCAGCACATGGCTTCAAAGGTGC
TCCATACAAGGTGCGAGACTTTCACGCCACATGTCCGCATCAACCTGGGC
CCCCAAAGCGTTTGGAGGAATGGGTACGAAGTTGGCAGATGGGACATGAT
CTTGAAGACACCCCAGACGATGACTTAGCAAAGCAGTGGAACTAACGTAA
TCCACGGGCGAGCGGGATGCATAATTACTTTGTACTCATTATTTGTCTGC
ATCCGCCGACGAACACCTGCAATTCCTCAGTTGGCTATTCCAAGGCGCAG
CAAGACGTACCTTTGTTGAATTGGGTCCAGAAATGTCGATGGACAAAGGA
GAAAAGCCAGCAGGTGAGATGGATCATCCATCTAGTCGCCTTGAGCACCA
TGGAACCTCCAGGAGAGGCAAGAAGTGGTCCTCTGAAGAGGTGGCCTTCC
TGCAGGAGCTAAGAAGTGATAAGGGCAAATTCTGGTCAGGAGTGACCAGA
TTGTTCTCGATCCGATATCCGAGCAGAAGTCGGGGTTCGATTCAGGTATC
CTGGTCTACAAAGCGGGGCACTTAACGGTCGGCCAGGTTGCGCAAGGAAC
TGTATCTGGTTGACGGACTTTTTTTGCATTACTAGTGTCGTTCCAAACTT
GAGGCGGCGATCAGGCGAAGTGGGGCTTCTTGCGGGACCCGAGCATGCAT
CTTCAAATACAAAGCCATTGTTTGTGAGAATTACGTTGACTAGCACGCTA
TATTGTGCTCAACCAATTCGCCAAAGGCAACAAACAGGTGGGGGAGGGGG
GGCGGGGGGGGGAGATGCATTGGACTGCGGAGAATCTTCCCAGTAGACGC
CTGCTTCAATTGAGCATATGGACAAGAACCGAATTTGGAAGGAACAGCAT
GATTCATCAAGTATGAAGGCCTACTTGTGCCTCCAGTAAATACAAACTGC
GACGATACAAATTGCTAAAGCCGCCACTGGCATACGATTATACATTGGGT
AATTGCGCGAAGCAGAGGGCGATACGTCCGCTTCTACATCCCGACCACTA
TATTCAGCACTCTCAATATCCGGAAGGAGCTCATTGGCGGCCGTATATTG
AGAAGTCCAGCATTTGTAAATAATGTCGCCATACTTCAAGCTCTCAGTAT
GTGGAAAAATCCCGTGTTCATAGTTTTCTGCGATCACTTCCCAGTCTTCG
TCGCTGATTTCTTCGTAAGGCCGTGCCCCGACCATAATCTCGAATATAAG
GCAGCCAAGAGCGAATAAGTCTGTCCGGAACGATCGAGGTGATTCTGGTG
ACTTTCGGTATCGGTCCTCTTCCGCAATAACGGGGGGCATATTGCCGATC
CCAGAACCTGCGAAGTCGCAAAGTTTGATAGATAGGTCATCCGCGACGAG
AAAGTTGCGAGCACTTATATCTCCGTGTATGATAGAATGATGGTGAATAA
ATTCAATCGCACTAACAGCGTTCCGTACCCATGTCTCCTTGGTCCGGTCG
TCCAGTTGAGCATGACTCTTCCGAATGTAATCGCGAAGGTTCCCATTCCG
CATGTATGGGAGCCAAATGCCAGAGTCTGTTATGC back to topCoding sequence (CDS) from alignment at ch3:1096541..1100975- >KJC3_013030-T1 ID=KJC3_013030-T1|Name=KJC3_013030-T1|organism=Aspergillus niger KJC3|type=CDS|length=1845bp|location=Sequence derived from alignment at ch3:1096541..1100975- (Aspergillus niger KJC3)
ATGTTCAGCTTCCATGTTGATAGCTTCAGACCTTGGAAAGCCCCTGCCCC
CACCAATACAAGCACATCCACCTCCCAGAGCCCCAAAAGATCCCCTGTCC
CTGCTGCTGTCAATACTATTCCTGCAACCGATACAAGGCCCGTCAGTCAC
TGCCACGAGAAAGGCTTGCCAACTCCCCGAAATCGGCCAAACGAACATCC
ACTTCCCGCTCGTCCACCAGCTGAAGTGTGTGCTCATGCCAACATGCGCT
CCAGCACCGTACCTCGTTCTCCCTATCAATATCTCTCGAGTCCCCAGCCT
GCTTTCAAGGTTGAGGATACGATCCAGCCTACCTTCACCACAGAGCTTCA
CTTCTCATCTCCGACATCTCTCCAACCCTCGGCTGCTCTAGAGGGCTCGA
AAAGGGATACCGAATTCCAACCCAAAATTCGAGCGGACCTACTCTTCCGA
GATGGCATCCGTGCAGGTGATACGCACAATAGCTGCATGGGTATTTACGA
TAAGGGCTCTAAAACCCTCGACGCACCGAACACTTTGCCGGTTGGCTTAG
AAGAAACCATGTTAAATGAAGATTTCATGGAGACCAGTCAGCCACGTCAG
ACTACCAACGATACTTATCTGTTCACTATGGATGAGTTACAAGCCGATTC
GCCTTATGTCGACGTTTCGCTGGATTCACCACCCCTACGTGAGCATAAAC
AGGATTTCGGCGAATCACCTCTCAACGGTTATGACATGAACTGTCTGGCT
GGATCTTTTCGGAATCAAAGCACGCATCAGAATCCCACTCCACATGGCTA
TGAGACTAGCGCGAGACAAAACGGCAGCGAGGAAAAAGGTGGTTGTAGCG
AAAAATTAACAGCCTGCAAGCGAAACTCTATCGAAGTTGAGCCAGAAATG
CTACCGCCCAAACGTCTCAAAACGGACCAATCCTCGAAATCTCTCAGTAC
CGGCACCGCGGATAATCGCCTTGGAGACTCTTCAATCCATTTTAGTGCCA
CAAATACTGTTCCCATCAACTCAGTGACCCTCTCACCTGATGAAGATCAT
CAGAGAGCTAACAGTACATCTCAAGTCGCTCAGCGTGCTAACACCGGCAC
AAGCGATCAAGGGGCACTCCGTGTCCGTCGCAGTTGTTCACTCAACCTAC
GATCTGCACAAACCCATTCCGTGAGTGCCGATGAAAACGGTGTCAAGCAA
AAACCCGCCCATGACCAGAACGCGCATCAACCCAGGCGGAGTGTTCGCCT
AAAACCTCAAGTCGTGGTGGAATCGGATGGTCCAGATAGCACCCCAACAA
AGCCTACTCTGTCAAACTCCGACAAGCGCCCGGCACAGCGGATTAAACCA
AGAAAGCCAAGAGGGCGACCTGCCAAGAAGGCATCAACCGCAAAGGCTAC
ACCACGCGAGAATGAATACAAATTCACGTCCCTCCGTTCGCACTTCCTGT
CAACGCCGCTCGACATGCGTTTGCAATTTGTCTCGTGGTTATTCGAGGCT
GTGCTACCTCGCTGCATGCACGATTCCAAGGCTGTCACCAACAGTCCATC
TCAGGTGTGCAATGCGGGTAGTGAAGAAGAATGGGAAGTAGAGGAGGTAG
TAGCCTCGCGAGTCTTCCGCGGGAGGCTTCAATACCAAGTACGGTGGAAA
GGATATGATTCTGACGAGACTTGGTATCCAGCACATGGCTTCAAAGGTGC
TCCATACAAGGTGCGAGACTTTCACGCCACATGTCCGCATCAACCTGGGC
CCCCAAAGCGTTTGGAGGAATGGGTACGAAGTTGGCAGATGGGACATGAT
CTTGAAGACACCCCAGACGATGACTTAGCAAAGCAGTGGAACTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013030-T1.utr5p1 | KJC3_013030-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016197 |
| DBxref | InterPro:IPR023780 |
| DBxref | InterPro:IPR000953 |
| DBxref | PFAM:PF00385 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1096541..1100975 - |
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