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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4701018..4702511+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013042-T1 ID=KJC3_013042-T1|Name=KJC3_013042-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1494bp|location=Sequence derived from alignment at ch3:4701018..4702511+ (Aspergillus niger KJC3)
GGCAAATAAGCGGGTGTCTGTCATTTACTTGACCGTTTCACCATCTTCAA
CTACAATAGGAGGGGCGCGGAGGCCAACCATCAATAATGAAAGTATGTAA
CATCTAGCTGCACCGGTAGCCCAAAGTCGACGCCGTGAAATGCTTATAAG
TCGACATCTCCCATCTGCCAGATCCGGCTTTCGCTCCCCCAGAAGCAATG
TCTCCAACCCTCTCAGACCTGTATAAACGGGCCACCCAAATCCAATACGG
TGATTGGTACGGAATATGGATTGCTGCCTTGCTGGGCGTCTGGCTGATCG
CGCGGTTGGCGTACCAGCTTGGTCGGTGGACTGTCCAACACCACATCGCG
GCCTCCCTTGGACGGCGTCTCGGCCGCGAGTTTCCGTGGCTTCTCCAGAC
TCTTGATATCGCCACCGCTCTGGAGGCGATCTTAGTTGGGGTGCTCTTGG
GCGCCAACATTGTCCTCCTACTCGTCTCCGCCCATGGCTGGGCTGATGTC
CAGCAACGTGCGGCGAAGCTCGCCGTCCTGAACCTATTGCCGCTCGGTAA
GGGCCTGACCTTTGGCCTCCTGGCCCATCTTCTCGGAATCAGCCGCTCTA
CCGTTGCGTGGTCGCATCGCTGGTTTGGGCGGGTGATGGCCGCCCATTCC
CTGCTTCATGGAGCCATTGCCATCGCCAGAGCGGATAACCCGATCCCCTC
GATCAGGCATGACTGGGTTGCGTTACTGGTCAGTCACCACACCGCCCCTC
GATGATGATGTTGACTGTGACCTGAGAGCCATACATACCACTAACCAGAG
CTAGGGAGCTGCTGCCATTCTGATGATGATCCCCGTGACCTTGCATGTGG
TCGTCCGACGGCACTGTCAGGTCGCCATGAGAATCCACTACCTTCTGGCG
GTCACAGCAATGGTGGCCCTGGCGTATCATACGTGGGACCGAGGGTCAGA
TTCCCGCTGGCAAGTGGTTGGTGCTGGGGCCCTATGGATCTTGCTGAATT
TCGTTGCCGTCTCTCATGCAGTTTTCGTCCAACAACGTTGGAAACGGCCC
GCCGTAACCATATATCGCTTTCATGGGCTGCTTCGCTTGAACATTACAGT
GTCCCCCCATTGGCATATCCAGCCGGGGCAGTACATATACCTCTGGTTAC
CTCACGCAGGATTTCGCTCGTGCTTCCAACTCCAGCCCTTCTATGTCGCT
TACTGGGATGATGCGCCCGGACCGCGCATCCTGTACGTTCTGACCCGACC
ACGAGCCTCCAGCCTCAGTACACGACTCTAACTCCGCGAATGGCTACACC
AGCGTCGACAGCCTGCACTGTTGGTGGGGCCATACGGCCGATCGATCGAC
TTTTCTCCGTTTGGGACGATCGTGTTCATCGTGGAGGACATTGGCATGTT
GCGAGTGCTTCCCTATATCCGCATGCTCGTCCAGGCGAGCGAGCAGCGGC
GGGCCATGGTACGCAAGCTGAAAATCGTGTGGCAGATGCAAGAC back to topCoding sequence (CDS) from alignment at ch3:4701018..4702511+ >KJC3_013042-T1 ID=KJC3_013042-T1|Name=KJC3_013042-T1|organism=Aspergillus niger KJC3|type=CDS|length=2016bp|location=Sequence derived from alignment at ch3:4701018..4702511+ (Aspergillus niger KJC3)
ATGTCTCCAACCCTCTCAGACCTGTATAAACGGGCCACCCAAATCCAATA
CGGTGATTGGTACGGAATATGGATTGCTGCCTTGCTGGGCGTCTGGCTGA
TCGCGCGGTTGGCGTACCAGCTTGGTCGGTGGACTGTCCAACACCACATC
GCGGCCTCCCTTGGACGGCGTCTCGGCCGCGAGTTTCCGTGGCTTCTCCA
GACTCTTGATATCGCCACCGCTCTGGAGGCGATCTTAGTTGGGGTGCTCT
TGGGCGCCAACATTGTCCTCCTACTCGTCTCCGCCCATGGCTGGGCTGAT
GTCCAGCAACGTGCGGCGAAGCTCGCCGTCCTGAACCTATTGCCGCTCGG
TAAGGGCCTGACCTTTGGCCTCCTGGCCCATCTTCTCGGAATCAGCCGCT
CTACCGTTGCGTGGTCGCATCGCTGGTTTGGGCGGGTGATGGCCGCCCAT
TCCCTGCTTCATGGAGCCATTGCCATCGCCAGAGCGGATAACCCGATCCC
CTCGATCAGGCATGACTGGGTTGCGTTACTGGGAGCTGCTGCCATTCTGA
TGATGATCCCCGTGACCTTGCATGTGGTCGTCCGACGGCACTGTCAGGTC
GCCATGAGAATCCACTACCTTCTGGCGGTCACAGCAATGGTGGCCCTGGC
GTATCATACGTGGGACCGAGGGTCAGATTCCCGCTGGCAAGTGGTTGGTG
CTGGGGCCCTATGGATCTTGCTGAATTTCGTTGCCGTCTCTCATGCAGTT
TTCGTCCAACAACGTTGGAAACGGCCCGCCGTAACCATATATCGCTTTCA
TGGGCTGCTTCGCTTGAACATTACAGTGTCCCCCCATTGGCATATCCAGC
CGGGGCAGTACATATACCTCTGGTTACCTCACGCAGGATTTCGCTCGTGC
TTCCAACTCCAGCCCTTCTATGTCGCTTACTGGGATGATGCGCCCGGACC
GCGCATCCTGTACGTTCTGACCCGACCACGAGCCTCCAGCCTCAGTACAC
GACTCTAAATGTCTCCAACCCTCTCAGACCTGTATAAACGGGCCACCCAA
ATCCAATACGGTGATTGGTACGGAATATGGATTGCTGCCTTGCTGGGCGT
CTGGCTGATCGCGCGGTTGGCGTACCAGCTTGGTCGGTGGACTGTCCAAC
ACCACATCGCGGCCTCCCTTGGACGGCGTCTCGGCCGCGAGTTTCCGTGG
CTTCTCCAGACTCTTGATATCGCCACCGCTCTGGAGGCGATCTTAGTTGG
GGTGCTCTTGGGCGCCAACATTGTCCTCCTACTCGTCTCCGCCCATGGCT
GGGCTGATGTCCAGCAACGTGCGGCGAAGCTCGCCGTCCTGAACCTATTG
CCGCTCGGTAAGGGCCTGACCTTTGGCCTCCTGGCCCATCTTCTCGGAAT
CAGCCGCTCTACCGTTGCGTGGTCGCATCGCTGGTTTGGGCGGGTGATGG
CCGCCCATTCCCTGCTTCATGGAGCCATTGCCATCGCCAGAGCGGATAAC
CCGATCCCCTCGATCAGGCATGACTGGGTTGCGTTACTGGGAGCTGCTGC
CATTCTGATGATGATCCCCGTGACCTTGCATGTGGTCGTCCGACGGCACT
GTCAGGTCGCCATGAGAATCCACTACCTTCTGGCGGTCACAGCAATGGTG
GCCCTGGCGTATCATACGTGGGACCGAGGGTCAGATTCCCGCTGGCAAGT
GGTTGGTGCTGGGGCCCTATGGATCTTGCTGAATTTCGTTGCCGTCTCTC
ATGCAGTTTTCGTCCAACAACGTTGGAAACGGCCCGCCGTAACCATATAT
CGCTTTCATGGGCTGCTTCGCTTGAACATTACAGTGTCCCCCCATTGGCA
TATCCAGCCGGGGCAGTACATATACCTCTGGTTACCTCACGCAGGATTTC
GCTCGTGCTTCCAACTCCAGCCCTTCTATGTCGCTTACTGGGATGATGCG
CCCGGACCGCGCATCCTGTACGTTCTGACCCGACCACGAGCCTCCAGCCT
CAGTACACGACTCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013042-T1.utr5p1 | KJC3_013042-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013042-T1.utr3p1 | KJC3_013042-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4701018..4702511 + |
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