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KJC3_013066-T1, KJC3_013066-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013066-T1
Unique NameKJC3_013066-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1064595..1066975-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013066-T1 ID=KJC3_013066-T1|Name=KJC3_013066-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2381bp|location=Sequence derived from alignment at ch4:1064595..1066975- (Aspergillus niger KJC3)
AACTGGTAGTGATGTATGTTAACTATGTTAGTTGATGAGTTAGTTATGTA
TGCAAGGTTGAGTCAGTCGGGAGTCACCTGAACTGCAATGGAGATTTAGT
TGGATTGAATCGTTGGTGTGTGTGTGGCTTAACCTGTGTATGGTTGGTTC
ATTGTGTTCAGGTTCATGCAAGGTATGGGAGTCATGATGGTCTTGTGACT
TAACTAACTTGTTAACGTAAGCGGCAAGCGAGTCGGCCACGTAAGCGAGT
CGGCCACCCCATCGAAACTCGTCCACGCCTCCGAAAGCGATGCTATCCAA
ACAGCCATTACACCACCAAAAATGCCTAAATCATCAAAAGAGTTGGTGGA
ACAAGAGGGCAGGCTCTGTTTAGCAGTTGAATCTATTCAGAAAGATCATA
CAAAATCTATTCGTGAAGCTGCACGCGTTTTTCAAGTTCCCCGATCAACA
CTTCAAGATCGCCTAAATGGGCTCAAATTTCGCAAGGATACTAGAGCCAA
CTCACATAAATTGACCTCTATAGAGGAAGAATCACTTGAAAAATGGATTA
TATCGCTAGATCAACGTGGTGCACCACCAAAGCACTCTCAAGTCCGTGAA
ATGGCGAATCTACTACTTCAAAAGCGTGGTCAAAATACAACTATCTCTGT
CGGACAAAAATGGGTTACCAACTACATCTCAAGGCATGATTCCTTGAAAA
GTCGATATAGCCGTCAAATCAACTACAAACGAGCGAAGTGTGAAGAACCT
GAAGCTATTCAGATGTGGTTTAAACGCGTACAAACTGCTATATCAACATA
CGGCATTGTCGACGAAGATATCTATAACTTCGATGAAACTGGCTTTGCTA
TGGGTATCCTGGGTACTACTAAAGTAGTAACACGCTCAACATGTCAAGGA
AGACCCTTTCTTATACAGCCAGGGAATCGCGAATGGATAACTTCAATTGA
GTGTATCAACGCTGCTGGATGGATGCTACCAGCATATTTAGTGTTAAAAG
CAAAAACACATATTCAAGCTTGGTACGAAGGAAGTCTACCATCTTCCTGG
AGGATTGCTATATCCTCAAATGGATGGACTACACGAGAGATTGGGGAAGC
ATGGCTCAAAGATCACTTCATTCCATACATCAAAACACGAAGAACAGGTC
AATATAGCCTCCTCGTACTTGACGGGCATGATTCGCATCTAACACCTCAA
TTTGATGACATATGTTATCAAAATCAGATTATACCTGTCTGTATGCCTGC
TAATTCCTCACATCTATGTCAGCCTCTAGATGTTGCATGCTTTTCGCCTT
TGAAGAAGGCCTACAAAGATCAAGTTCAACAGCTTATCCGTACGGGATAT
CATCATATCGAGAAGGTTGATTTTCTTGACATGTATCCGAAAGCCCATGC
TCAAGCGTTTACTAAAGCAAATATACAAAGCGCTTTTAGAGCTTCAGGTC
TTGTTCCTCTAGATCCCAGCAAGATACTAGAGAATATGATTTTCAAGGAG
ACCAGCCGTCCGAGCAGTCAAAGCACCTCCTCTTCTTCGATCTTTACAAA
AACACCAAGGAATTCGAGGCAATTCAAGAAGTACGAGTCTACACTATCTC
AATTACTTCAACAACAAGATACTCCAGCTACACCAATACAGTCAGCCTTA
TCGTACATCTTCAAAGGCGCGGAGGTTGCTTTGAATCATACAGTACTACT
TGAGCATGAAAATCGCCAACTACGTGAAGCTCTTGACAAACGAAACACCA
AGCAGAAACGCAATCAACATCAAATGGATGGTTTGAATGGCCTCACTGTA
CAAGAAGCGCTTGAGGCTTTCAACCATGCTAGAATATTGGAAGAACAGGC
TGGGGATGCAGGTCCTAGGGAGGATCAACCACGCCGTCGGGCGCCTCCTA
GGTGTAGCGCGTGCCATATTGTAGGGCATATACGTACTAGATGTCCTAAT
CGAGCAGTATCTTGAGATAGAGCGCTTTTAAGCGTTGAATTAGGTGTTCA
AAAAGCATCATTTTGTATGTAAATCAGAATGATGATATACTACTAGCGGA
GGTGGCCGACTCGCTTACGTGGCCGACTCGCTTGCCGCTTACGTTAACTA
ACGTTAGTCACTGGGTGTTTCTGACTCAGGCAGAGGTGTAGGTAACTAGT
TAGCTGAAGCTGGAGGGTTCGGGGTCGGGGACGGACATGGGAATGAGGAC
GGGGACGGGTTCCCGATTGTTGATTTACTCGCTTACTTACTTGCTTACTT
AATGTTACTGGGTGTAGTAGCTAGATATTACCAAATAGGTATAGTCCTGG
CTAAGTGGTATAGTGTAATAGATATGCATGGAAGTGGGCTGGGTTTCAGC
GAGCGTGTTTCGGGATGATGCATAGTTGGTG
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Coding sequence (CDS) from alignment at ch4:1064595..1066975-

>KJC3_013066-T1 ID=KJC3_013066-T1|Name=KJC3_013066-T1|organism=Aspergillus niger KJC3|type=CDS|length=2106bp|location=Sequence derived from alignment at ch4:1064595..1066975- (Aspergillus niger KJC3)
CGCTTTTAGATGCCTAAATCATCAAAAGAGTTGGTGGAACAAGAGGGCAG
GCTCTGTTTAGCAGTTGAATCTATTCAGAAAGATCATACAAAATCTATTC
GTGAAGCTGCACGCGTTTTTCAAGTTCCCCGATCAACACTTCAAGATCGC
CTAAATGGGCTCAAATTTCGCAAGGATACTAGAGCCAACTCACATAAATT
GACCTCTATAGAGGAAGAATCACTTGAAAAATGGATTATATCGCTAGATC
AACGTGGTGCACCACCAAAGCACTCTCAAGTCCGTGAAATGGCGAATCTA
CTACTTCAAAAGCGTGGTCAAAATACAACTATCTCTGTCGGACAAAAATG
GGTTACCAACTACATCTCAAGGCATGATTCCTTGAAAAGTCGATATAGCC
GTCAAATCAACTACAAACGAGCGAAGTGTGAAGAACCTGAAGCTATTCAG
ATGTGGTTTAAACGCGTACAAACTGCTATATCAACATACGGCATTGTCGA
CGAAGATATCTATAACTTCGATGAAACTGGCTTTGCTATGGGTATCCTGG
GTACTACTAAAGTAGTAACACGCTCAACATGTCAAGGAAGACCCTTTCTT
ATACAGCCAGGGAATCGCGAATGGATAACTTCAATTGAGTGTATCAACGC
TGCTGGATGGATGCTACCAGCATATTTAGTGTTAAAAGCAAAAACACATA
TTCAAGCTTGGTACGAAGGAAGTCTACCATCTTCCTGGAGGATTGCTATA
TCCTCAAATGGATGGACTACACGAGAGATTGGGGAAGCATGGCTCAAAGA
TCACTTCATTCCATACATCAAAACACGAAGAACAGGTCAATATAGCCTCC
TCGTACTTGACGGGCATGATTCGCATCTAACACCTCAATTTGATGACATA
TGTTATCAAAATCAGATTATACCTGTCTGTATGCCTGCTAATTCCTCACA
TCTATGTCAGCCTCTAGATGTTGCATGCTTTTCGCCTTTGAAGAAGGCCT
ACAAAGATCAAGTTCAACAGCTTATCCGTACGGGATATCATCATATCGAG
AAGCGCTTTTAGATGCCTAAATCATCAAAAGAGTTGGTGGAACAAGAGGG
CAGGCTCTGTTTAGCAGTTGAATCTATTCAGAAAGATCATACAAAATCTA
TTCGTGAAGCTGCACGCGTTTTTCAAGTTCCCCGATCAACACTTCAAGAT
CGCCTAAATGGGCTCAAATTTCGCAAGGATACTAGAGCCAACTCACATAA
ATTGACCTCTATAGAGGAAGAATCACTTGAAAAATGGATTATATCGCTAG
ATCAACGTGGTGCACCACCAAAGCACTCTCAAGTCCGTGAAATGGCGAAT
CTACTACTTCAAAAGCGTGGTCAAAATACAACTATCTCTGTCGGACAAAA
ATGGGTTACCAACTACATCTCAAGGCATGATTCCTTGAAAAGTCGATATA
GCCGTCAAATCAACTACAAACGAGCGAAGTGTGAAGAACCTGAAGCTATT
CAGATGTGGTTTAAACGCGTACAAACTGCTATATCAACATACGGCATTGT
CGACGAAGATATCTATAACTTCGATGAAACTGGCTTTGCTATGGGTATCC
TGGGTACTACTAAAGTAGTAACACGCTCAACATGTCAAGGAAGACCCTTT
CTTATACAGCCAGGGAATCGCGAATGGATAACTTCAATTGAGTGTATCAA
CGCTGCTGGATGGATGCTACCAGCATATTTAGTGTTAAAAGCAAAAACAC
ATATTCAAGCTTGGTACGAAGGAAGTCTACCATCTTCCTGGAGGATTGCT
ATATCCTCAAATGGATGGACTACACGAGAGATTGGGGAAGCATGGCTCAA
AGATCACTTCATTCCATACATCAAAACACGAAGAACAGGTCAATATAGCC
TCCTCGTACTTGACGGGCATGATTCGCATCTAACACCTCAATTTGATGAC
ATATGTTATCAAAATCAGATTATACCTGTCTGTATGCCTGCTAATTCCTC
ACATCTATGTCAGCCTCTAGATGTTGCATGCTTTTCGCCTTTGAAGAAGG
CCTACAAAGATCAAGTTCAACAGCTTATCCGTACGGGATATCATCATATC
GAGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013066KJC3_013066Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013066-T1KJC3_013066-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013066-T1.cdsKJC3_013066-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013066-T1.utr3p1KJC3_013066-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013066-T1.exon3KJC3_013066-T1.exon3Aspergillus niger KJC3exon
KJC3_013066-T1.exon2KJC3_013066-T1.exon2Aspergillus niger KJC3exon
KJC3_013066-T1.exon1KJC3_013066-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013066-T1.utr5p2KJC3_013066-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_013066-T1.utr5p1KJC3_013066-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR004875
DBxrefInterPro:IPR007889
DBxrefInterPro:IPR006600
DBxrefPFAM:PF03221
DBxrefPFAM:PF05225
DBxrefPFAM:PF03184
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1064595..1066975 -
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