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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4372416..4375469+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013096-T1 ID=KJC3_013096-T1|Name=KJC3_013096-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3054bp|location=Sequence derived from alignment at ch6:4372416..4375469+ (Aspergillus niger KJC3)
GCCCCCTAGAACAGCGCCGATTAGGGCCATCTGCATTCCTAGCCTAATAA
GATTTGCCCGCTAGATAAGTCCTGATTGCACATTATAATCGTAGGTCGAG
GGCCCGGTCAACGATATGCGTTTATCGACCCATGGCGGTAGACGCATTCT
CTCGCCCGTCCCTGCCCAGTTTGCCCGCACCGTTCTCTACCCGCCACCAT
CCCTCAACTTCTTTCAAAAGACCTCACCACGGATGCATTCGCAGAACGAT
TGGGAAGAATGTAATTGACCATCACATCAAATCAATACGATTTAAGTTTT
CATTCTGGCATTACCTGGGCTCTTTTTTGACGGTCACCATGTCTCAACCG
GAACAACAATGTGCGGCCCGTGGACTTGTTTTTGGGCCCTGGTCTGCTGG
TTCCCTCATGGCTCAACTATAACGAGGGGAGATAAGCTATTCAGTGTTAG
CGTGCGCTCAATGCGATGTTGTCCTCGATATATCAATAGCCAGGTCGCCA
TGATTCCCAGGATCGTCATCAAGCATGCGGCCAACACACCAAGCTCGCAT
CGAATCCGAGGAGAAGGCGCTGGAAGCCTACCGCCAGGAGCGCTACCAGG
GTAGCGCCCGAGTCCGCCTGGACTGTCTGACGTTCGAAAATGGCTTTGGC
CGCTTGATGGACGACGGCCGAAATGCCCTCCGACTGGAGCAAATCCTCGA
GATACAAGGATGTCTCCGCATCAATCGAGACTACCATGTGCCCGTCTTGG
TCCGAGCCACGGACTGGGGCTCCCACATCAGGCTGTTGCCGGGCGAGGCG
GAGCCGTTTCCCGAGCTGATCGTGCCCTTGAACATGTCGCTGCGCGCATT
GGGCCACGAGAACGTCATTGCCGCAGCGCGAAAAAAGCTCTACGGCGAGA
ACCGATGGTGGGTGGTCGATGTGTATGTGGAGGATCCCAGTAAGTTGGCG
CTGGAGTCTTTCCGAGTCTCAGCCTGTGTGCCCCTTCCGGTCCACCTGCT
AAGTGTGGCTCGTCAGATGAGCAACCCCACCGACAGTCTCTCCATTCTCA
ACTCGTTCGCTCGCTTCGAGAGCATTTCCCAAACCAACGCCGACCGCCGG
ACGGATTGATCTACGAAAGAATTCGGTTCTATCAAGGATATCTGGGCCAT
CCGCCGGACGAACAAGCGGAGGCACTTTGGTGGGCCGTCCTCCGACACGA
CCCCAAGAGTAAGAAGCATATATATCTCCGGGCCTTTCTCCAACATCCCA
GTTTCCCTGCAGCATTTGATGCCCTGCTCCTTATTCCGGGGCTTTGGGCC
AAAATGCAATTGGGCGTGCTGCATACCATGGTGTCACTGCGATGTGACGA
GGTGAGTGAGTGGCCCAAGTGTCTACGAAATGAAAGTCTCTTCTAAGGAA
CCCGTTATCTCTAGCCCATCCTGTCCTACCTCGAAACTATCCGCACGGTC
TGGATGGACCGTATTTTCGGCGGGAGCGACACCCTTCCTGTTCACGCAGA
CGCGGAGACCGTTCTCGCGCTGGAATCTCAAGTCCCAAAGCTCTCGGAAC
CGGACCGGGAAAATCTGCGATCTCGGATGATGGGCGGCCGGACGTTGTTT
CCATCGATCGACGACTCCGACACACGGGCGGCACTGTGGGAGCGACTGAA
GCAGATCGATACCCCTTTTCCCACCCTGGGGACGTTCTTCCAGGACCTCC
GTTTCTTAGGTGTTGCCAGCAAGGTGATGAAGGCTCTTCTTTTTCCACCA
GAGGACCTGGGCTCGAAGAAGACCAAGAAGATCACTATCGACTGTGAACT
CGGTACGCAGCATCGGACCGATGCCAGCGTGTCATTAAGAGAGACAAGAC
TGCAAGTACGGCGGGGATTGCACGAGCTCTGGCGCTTCAGCTTCCAATAC
GGGCTGGACATGACCGAAGTTGCACGTCGTCAGCCGCATAAGAGGAAGAA
AGCGTGTAGCTCCTATCCTGTCCCGAATTGCTCGACATCGGTTGACCGAA
TGGCGTTGTGGCGCCACTTCTTCTGGCTGGCTGACCAGCAAGGCTTTCAG
ATCCCGGCTATAGCCGAGTTTGCGCCGGGACAAGCGTCCCTGCCCAACCC
GCAAACTCCGGAGGGCCTTGGCAGCACCGAACAGGATGAAGCAGTGAATC
GGCGTTGCGGTATCCCATACGCTGATACGGTCGATGCGGATCGCTTCGCC
CTAGAAGGGAATAGACTGTGGCAGCCCTGGGAGGCCCCACAGGTTACAAC
CGTGTTCTTCCGACAGTCACAGTTTCAGACCTTCTTCCGCTACCTTTGGG
ATGGAACTGGAATCAATCAGGCCACGAACGCCGCCCGCGAATCTGCAGCG
ACCGATGGAACCGCAGCGGTAGATCAAGAGATGTTGAATGACGAGTTGGA
GCATCGCATGCCATCGCCAAGTTTCTCTCAGATTCTACAAATAAGCAGTC
CGATCGACTGGTCTATGGCAATGTGGGACTGCGGAATGGGATCACTTGAA
ATGCCTATAGGCAATCTGGAGGTGGTTGTGACCATCCCGAATCACAACCC
AAGACCAATTTCGCTGCCATGTGACGAAATGATCATCAACAACTTCTTCA
ATGGACTGAAAGAGCGTAGATTTGTTATCCACAGCCTGGATTACCACACG
GTGTCCGCAGAGCCAAGTCTTTATCTCTGGCATCTGAGGTACCCATGGGA
AAGAGTTCAGGCCATATTGACCGAGGAGAATGTGCAGGAGTATACGGCAT
CCGACGGAAATCGACTTAAAAGGAGACGAAGAGAGATCGCTGAGGCAATA
GATGACATTGCTGCGTGGGTGGACGAGCAAATTCTTAAGCTATCTGTTCC
CGCTCCCCCCTCTTGGGAATGGAATGTACATGAGGAGGAGTATTGATCAG
AATAGAAAAGATTTGATATTTTCGATTTACAGAGATCATATCATCGTGAC
AAGATAAACATGCTGGATCTTCTGTTGTATGGTATCATTACAGCACGAAG
CAAATGGCTCATTGGTAAAATAGTATTCTACCCTATTGCGGGATTATGCT
CGGA back to topCoding sequence (CDS) from alignment at ch6:4372416..4375469+ >KJC3_013096-T1 ID=KJC3_013096-T1|Name=KJC3_013096-T1|organism=Aspergillus niger KJC3|type=CDS|length=3060bp|location=Sequence derived from alignment at ch6:4372416..4375469+ (Aspergillus niger KJC3)
ATGCAATTGGGCGTGCTGCATACCATGGTGTCACTGCGATGTGACGAGCC
CATCCTGTCCTACCTCGAAACTATCCGCACGGTCTGGATGGACCGTATTT
TCGGCGGGAGCGACACCCTTCCTGTTCACGCAGACGCGGAGACCGTTCTC
GCGCTGGAATCTCAAGTCCCAAAGCTCTCGGAACCGGACCGGGAAAATCT
GCGATCTCGGATGATGGGCGGCCGGACGTTGTTTCCATCGATCGACGACT
CCGACACACGGGCGGCACTGTGGGAGCGACTGAAGCAGATCGATACCCCT
TTTCCCACCCTGGGGACGTTCTTCCAGGACCTCCGTTTCTTAGGTGTTGC
CAGCAAGGTGATGAAGGCTCTTCTTTTTCCACCAGAGGACCTGGGCTCGA
AGAAGACCAAGAAGATCACTATCGACTGTGAACTCGGTACGCAGCATCGG
ACCGATGCCAGCGTGTCATTAAGAGAGACAAGACTGCAAGTACGGCGGGG
ATTGCACGAGCTCTGGCGCTTCAGCTTCCAATACGGGCTGGACATGACCG
AAGTTGCACGTCGTCAGCCGCATAAGAGGAAGAAAGCGTGTAGCTCCTAT
CCTGTCCCGAATTGCTCGACATCGGTTGACCGAATGGCGTTGTGGCGCCA
CTTCTTCTGGCTGGCTGACCAGCAAGGCTTTCAGATCCCGGCTATAGCCG
AGTTTGCGCCGGGACAAGCGTCCCTGCCCAACCCGCAAACTCCGGAGGGC
CTTGGCAGCACCGAACAGGATGAAGCAGTGAATCGGCGTTGCGGTATCCC
ATACGCTGATACGGTCGATGCGGATCGCTTCGCCCTAGAAGGGAATAGAC
TGTGGCAGCCCTGGGAGGCCCCACAGGTTACAACCGTGTTCTTCCGACAG
TCACAGTTTCAGACCTTCTTCCGCTACCTTTGGGATGGAACTGGAATCAA
TCAGGCCACGAACGCCGCCCGCGAATCTGCAGCGACCGATGGAACCGCAG
CGGTAGATCAAGAGATGTTGAATGACGAGTTGGAGCATCGCATGCCATCG
CCAAGTTTCTCTCAGATTCTACAAATAAGCAGTCCGATCGACTGGTCTAT
GGCAATGTGGGACTGCGGAATGGGATCACTTGAAATGCCTATAGGCAATC
TGGAGGTGGTTGTGACCATCCCGAATCACAACCCAAGACCAATTTCGCTG
CCATGTGACGAAATGATCATCAACAACTTCTTCAATGGACTGAAAGAGCG
TAGATTTGTTATCCACAGCCTGGATTACCACACGGTGTCCGCAGAGCCAA
GTCTTTATCTCTGGCATCTGAGGTACCCATGGGAAAGAGTTCAGGCCATA
TTGACCGAGGAGAATGTGCAGGAGTATACGGCATCCGACGGAAATCGACT
TAAAAGGAGACGAAGAGAGATCGCTGAGGCAATAGATGACATTGCTGCGT
GGGTGGACGAGCAAATTCTTAAGCTATCTGTTCCCGCTCCCCCCTCTTGG
GAATGGAATGTACATGAGGAGGAGTATTGAATGCAATTGGGCGTGCTGCA
TACCATGGTGTCACTGCGATGTGACGAGCCCATCCTGTCCTACCTCGAAA
CTATCCGCACGGTCTGGATGGACCGTATTTTCGGCGGGAGCGACACCCTT
CCTGTTCACGCAGACGCGGAGACCGTTCTCGCGCTGGAATCTCAAGTCCC
AAAGCTCTCGGAACCGGACCGGGAAAATCTGCGATCTCGGATGATGGGCG
GCCGGACGTTGTTTCCATCGATCGACGACTCCGACACACGGGCGGCACTG
TGGGAGCGACTGAAGCAGATCGATACCCCTTTTCCCACCCTGGGGACGTT
CTTCCAGGACCTCCGTTTCTTAGGTGTTGCCAGCAAGGTGATGAAGGCTC
TTCTTTTTCCACCAGAGGACCTGGGCTCGAAGAAGACCAAGAAGATCACT
ATCGACTGTGAACTCGGTACGCAGCATCGGACCGATGCCAGCGTGTCATT
AAGAGAGACAAGACTGCAAGTACGGCGGGGATTGCACGAGCTCTGGCGCT
TCAGCTTCCAATACGGGCTGGACATGACCGAAGTTGCACGTCGTCAGCCG
CATAAGAGGAAGAAAGCGTGTAGCTCCTATCCTGTCCCGAATTGCTCGAC
ATCGGTTGACCGAATGGCGTTGTGGCGCCACTTCTTCTGGCTGGCTGACC
AGCAAGGCTTTCAGATCCCGGCTATAGCCGAGTTTGCGCCGGGACAAGCG
TCCCTGCCCAACCCGCAAACTCCGGAGGGCCTTGGCAGCACCGAACAGGA
TGAAGCAGTGAATCGGCGTTGCGGTATCCCATACGCTGATACGGTCGATG
CGGATCGCTTCGCCCTAGAAGGGAATAGACTGTGGCAGCCCTGGGAGGCC
CCACAGGTTACAACCGTGTTCTTCCGACAGTCACAGTTTCAGACCTTCTT
CCGCTACCTTTGGGATGGAACTGGAATCAATCAGGCCACGAACGCCGCCC
GCGAATCTGCAGCGACCGATGGAACCGCAGCGGTAGATCAAGAGATGTTG
AATGACGAGTTGGAGCATCGCATGCCATCGCCAAGTTTCTCTCAGATTCT
ACAAATAAGCAGTCCGATCGACTGGTCTATGGCAATGTGGGACTGCGGAA
TGGGATCACTTGAAATGCCTATAGGCAATCTGGAGGTGGTTGTGACCATC
CCGAATCACAACCCAAGACCAATTTCGCTGCCATGTGACGAAATGATCAT
CAACAACTTCTTCAATGGACTGAAAGAGCGTAGATTTGTTATCCACAGCC
TGGATTACCACACGGTGTCCGCAGAGCCAAGTCTTTATCTCTGGCATCTG
AGGTACCCATGGGAAAGAGTTCAGGCCATATTGACCGAGGAGAATGTGCA
GGAGTATACGGCATCCGACGGAAATCGACTTAAAAGGAGACGAAGAGAGA
TCGCTGAGGCAATAGATGACATTGCTGCGTGGGTGGACGAGCAAATTCTT
AAGCTATCTGTTCCCGCTCCCCCCTCTTGGGAATGGAATGTACATGAGGA
GGAGTATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013096-T1.utr5p1 | KJC3_013096-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013096-T1.utr3p1 | KJC3_013096-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022198 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4372416..4375469 + |
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