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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:297885..298834- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_000250-T1 ID=KYF_000250-T1|Name=KYF_000250-T1|organism=Aspergillus niger KYF3|type=mRNA|length=950bp|location=Sequence derived from alignment at ch1:297885..298834- (Aspergillus niger KYF3)
ATGATGCCTGATTTATTTCTCGGCAAGTCAAACTGTCTCGGAGATTCGTT
CACCACGCTTATCATGCACACATTCTCACAATCGAGCCCCATGCCTACAG
AGGTCATCATCAAGATATTCGGGGAACTCACTCTTCCGGATTCGCTTCAC
TTGGCCGCGACTTGCCGTCGACTCCGCCAGGTCATGAAAGAAAATACGCC
TGCCATTTACAGACGCCTACGCAGACAGATCCCATGTGAGCGATATGCAA
GAGTCGTACTGGCAGATCAAGGGGGCCCGCCACCTTATTCGTCTTCTTCA
ATGACTATCGCGGATCTTTTACGGTTGCGACGGAACTCTCGTATCGTGGA
GAAGGCCATCGAGGTGTTTGACCGTGATATTACCGCGCATATTCGAAGTG
AGTAGACAGATTGAGAAGCACAGTAAGTATGAGAGACATGTGATAATTGA
AATCTTTTACAGTTTCCCTTAAGAGCATCGATGACCAATTCTATGGAGGA
AACCCACGTCCGCTGTCATTGACTCCAACAGAACGCCATCGGTTCACTCG
GAGCTACTACCAAGTTTGGAGTCTTCTACTCCTAAACCAACCATCCCGAC
AAAAAAGATATCAGAATATGTTGCTGAAGCACTTATACATGATCTACGAG
ATGACTGATCTTGATCAGCCAATTGGGGACGAATCGAGATCTTTCCCAGC
TGACGAGAAGCGATGCGAACTGCTTCAAGAAGTAAGCGAGTACCTCCGTG
ATCTCTACCACAACATCCATGGAGTTGACTACATCGATTTCTCGGGGCAA
AGTGTTTCCATGCGTACGCAAGGTCATGCAGCTATATGGGACCATTGCCA
GCCCGATTTAAAGAAGATTGTTTGCTACCAGTGGCGAGATCCAGAGAAGA
AACCTGTCCAGGAGGAAGAGGTGTGGGAGCATACAACTGATGAAGAATGA
back to topCoding sequence (CDS) from alignment at ch1:297885..298834- >KYF_000250-T1 ID=KYF_000250-T1|Name=KYF_000250-T1|organism=Aspergillus niger KYF3|type=CDS|length=1770bp|location=Sequence derived from alignment at ch1:297885..298834- (Aspergillus niger KYF3)
TTTCCCTTAAGAGCATCGATGACCAATTCTATGGAGGAAACCCACGTCCG
CTGTCATTGACTCCAACAGAACGCCATCGGTTCACTCGGAGCTACTACCA
AGTTTGGAGTCTTCTACTCCTAAACCAACCATCCCGACAAAAAAGATATC
AGAATATGTTGCTGAAGCACTTATACATGATCTACGAGATGACTGATCTT
GATCAGCCAATTGGGGACGAATCGAGATCTTTCCCAGCTGACGAGAAGCG
ATGCGAACTGCTTCAAGAAGTAAGCGAGTACCTCCGTGATCTCTACCACA
ACATCCATGGAGTTGACTACATCGATTTCTCGGGGCAAAGTGTTTCCATG
CGTACGCAAGGTCATGCAGCTATATGGGACCATTGCCAGCCCGATTTAAA
GAAGATTGTTTGCTACCAGTGGCGAGATCCAGAGAAGAAACCTGTCCAGG
AGGAAGAGGTGTGGGAGCATACAACTGATGAAGAATGAATGATGCCTGAT
TTATTTCTCGGCAAGTCAAACTGTCTCGGAGATTCGTTCACCACGCTTAT
CATGCACACATTCTCACAATCGAGCCCCATGCCTACAGAGGTCATCATCA
AGATATTCGGGGAACTCACTCTTCCGGATTCGCTTCACTTGGCCGCGACT
TGCCGTCGACTCCGCCAGGTCATGAAAGAAAATACGCCTGCCATTTACAG
ACGCCTACGCAGACAGATCCCATGTGAGCGATATGCAAGAGTCGTACTGG
CAGATCAAGGGGGCCCGCCACCTTATTCGTCTTCTTCAATGACTATCGCG
GATCTTTTACGGTTGCGACGGAACTCTCGTATCGTGGAGAAGGCCATCGA
GGTGTTTGACCGTGATATTACCGCGCATATTCGAATTTCCCTTAAGAGCA
TCGATGACCAATTCTATGGAGGAAACCCACGTCCGCTGTCATTGACTCCA
ACAGAACGCCATCGGTTCACTCGGAGCTACTACCAAGTTTGGAGTCTTCT
ACTCCTAAACCAACCATCCCGACAAAAAAGATATCAGAATATGTTGCTGA
AGCACTTATACATGATCTACGAGATGACTGATCTTGATCAGCCAATTGGG
GACGAATCGAGATCTTTCCCAGCTGACGAGAAGCGATGCGAACTGCTTCA
AGAAGTAAGCGAGTACCTCCGTGATCTCTACCACAACATCCATGGAGTTG
ACTACATCGATTTCTCGGGGCAAAGTGTTTCCATGCGTACGCAAGGTCAT
GCAGCTATATGGGACCATTGCCAGCCCGATTTAAAGAAGATTGTTTGCTA
CCAGTGGCGAGATCCAGAGAAGAAACCTGTCCAGGAGGAAGAGGTGTGGG
AGCATACAACTGATGAAGAATGAATGATGCCTGATTTATTTCTCGGCAAG
TCAAACTGTCTCGGAGATTCGTTCACCACGCTTATCATGCACACATTCTC
ACAATCGAGCCCCATGCCTACAGAGGTCATCATCAAGATATTCGGGGAAC
TCACTCTTCCGGATTCGCTTCACTTGGCCGCGACTTGCCGTCGACTCCGC
CAGGTCATGAAAGAAAATACGCCTGCCATTTACAGACGCCTACGCAGACA
GATCCCATGTGAGCGATATGCAAGAGTCGTACTGGCAGATCAAGGGGGCC
CGCCACCTTATTCGTCTTCTTCAATGACTATCGCGGATCTTTTACGGTTG
CGACGGAACTCTCGTATCGTGGAGAAGGCCATCGAGGTGTTTGACCGTGA
TATTACCGCGCATATTCGAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR001810 |
| DBxref | PFAM:PF12937 |
| DBxref | PFAM:PF00646 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:297885..298834 - |
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