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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:460976..461811+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_000306-T1 ID=KYF_000306-T1|Name=KYF_000306-T1|organism=Aspergillus niger KYF3|type=mRNA|length=836bp|location=Sequence derived from alignment at ch1:460976..461811+ (Aspergillus niger KYF3)
ATGAAGGTCTCCAGCCTCCCCATCTTAGCCTTCCTCCCTACCTCCCTCGC
CACAACCATCTACCTGGCGGGGGACTCCACCATGGCCACCGGCGGTGGTG
GTTCCGACACAGCAGGTACTTTCCCTCCTACCCCATCACGCCTTCATCCA
CTAACAAACAATCAGGCTGGGGTGACTACGTCGCCCAATACCTAAGCAAC
TCAAGCGGCATCACCGTGTCCAACCAAGCCGTAGCCGGGCGCAGCGCACG
GTCCTACACGCGCGAAGGCCGATTTGACGACATCGCCAGCACCCTTGAAG
CGGGCGACTACGTGATCATCGAGTTCGGTCACAACGACGGCGGCACGCTC
AGCTCGACCAGCGACAACGGCCGCACCGACTGTTCCGGCACGGGCTCCGA
AGTATGCTACTCGGAATATGACGGCGTCAATGAAACCATCCTCACCTTCC
CTGCGTACCTCGAGAACGCCGCCAATACATTCCAGAAAATCGGCGCGACC
GTCATCATCTCTTCGCAGACGCCCGATAACCCCTGGGAAACAGGCACTTT
CGTGGATGACCCGCCGCGGTTCGTCGAGTACGCGGAGATCGCGGCGGACA
CGGCGGATACGTCGTACGTGAATCATTTTGCCTATGTGGATCAGGTGTAT
GAGGCGTTGGGAGCGGATACCGTGGATGCATTTTATCCGATTGATCATAC
GCATACGAGTCCGGCGGGGGCGGATGTTGTTGCTAAGGCGTTTCTGAGGG
GTGTGGTCTGTGGAAAGTTGAGCTTGGCGGATGAGCTTGTGACGGATGAT
TTGGAGTTGGATGAGTATGAATGTTTGGATGAGTAG back to topCoding sequence (CDS) from alignment at ch1:460976..461811+ >KYF_000306-T1 ID=KYF_000306-T1|Name=KYF_000306-T1|organism=Aspergillus niger KYF3|type=CDS|length=1572bp|location=Sequence derived from alignment at ch1:460976..461811+ (Aspergillus niger KYF3)
ATGAAGGTCTCCAGCCTCCCCATCTTAGCCTTCCTCCCTACCTCCCTCGC
CACAACCATCTACCTGGCGGGGGACTCCACCATGGCCACCGGCGGTGGTG
GTTCCGACACAGCAGGCTGGGGTGACTACGTCGCCCAATACCTAAGCAAC
TCAAGCGGCATCACCGTGTCCAACCAAGCCGTAGCCGGGCGCAGCGCACG
GTCCTACACGCGCGAAGGCCGATTTGACGACATCGCCAGCACCCTTGAAG
CGGGCGACTACGTGATCATCGAGTTCGGTCACAACGACGGCGGCACGCTC
AGCTCGACCAGCGACAACGGCCGCACCGACTGTTCCGGCACGGGCTCCGA
AGTATGCTACTCGGAATATGACGGCGTCAATGAAACCATCCTCACCTTCC
CTGCGTACCTCGAGAACGCCGCCAATACATTCCAGAAAATCGGCGCGACC
GTCATCATCTCTTCGCAGACGCCCGATAACCCCTGGGAAACAGGCACTTT
CGTGGATGACCCGCCGCGGTTCGTCGAGTACGCGGAGATCGCGGCGGACA
CGGCGGATACGTCGTACGTGAATCATTTTGCCTATGTGGATCAGGTGTAT
GAGGCGTTGGGAGCGGATACCGTGGATGCATTTTATCCGATTGATCATAC
GCATACGAGTCCGGCGGGGGCGGATGTTGTTGCTAAGGCGTTTCTGAGGG
GTGTGGTCTGTGGAAAGTTGAGCTTGGCGGATGAGCTTGTGACGGATGAT
TTGGAGTTGGATGAGTATGAATGTTTGGATGAGTAGATGAAGGTCTCCAG
CCTCCCCATCTTAGCCTTCCTCCCTACCTCCCTCGCCACAACCATCTACC
TGGCGGGGGACTCCACCATGGCCACCGGCGGTGGTGGTTCCGACACAGCA
GGCTGGGGTGACTACGTCGCCCAATACCTAAGCAACTCAAGCGGCATCAC
CGTGTCCAACCAAGCCGTAGCCGGGCGCAGCGCACGGTCCTACACGCGCG
AAGGCCGATTTGACGACATCGCCAGCACCCTTGAAGCGGGCGACTACGTG
ATCATCGAGTTCGGTCACAACGACGGCGGCACGCTCAGCTCGACCAGCGA
CAACGGCCGCACCGACTGTTCCGGCACGGGCTCCGAAGTATGCTACTCGG
AATATGACGGCGTCAATGAAACCATCCTCACCTTCCCTGCGTACCTCGAG
AACGCCGCCAATACATTCCAGAAAATCGGCGCGACCGTCATCATCTCTTC
GCAGACGCCCGATAACCCCTGGGAAACAGGCACTTTCGTGGATGACCCGC
CGCGGTTCGTCGAGTACGCGGAGATCGCGGCGGACACGGCGGATACGTCG
TACGTGAATCATTTTGCCTATGTGGATCAGGTGTATGAGGCGTTGGGAGC
GGATACCGTGGATGCATTTTATCCGATTGATCATACGCATACGAGTCCGG
CGGGGGCGGATGTTGTTGCTAAGGCGTTTCTGAGGGGTGTGGTCTGTGGA
AAGTTGAGCTTGGCGGATGAGCTTGTGACGGATGATTTGGAGTTGGATGA
GTATGAATGTTTGGATGAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-17) |
| Note | CAZy:CE12 |
| DBxref | InterPro:IPR037459 |
| DBxref | InterPro:IPR013830 |
| DBxref | InterPro:IPR036514 |
| DBxref | PFAM:PF13472 |
| DBxref | PFAM:PF00657 |
| Product | Rhamnogalacturonan acetylesterase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:460976..461811 + |
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