You are here

Home

KYF_000556-T1, KYF_000556-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_000556-T1
Unique NameKYF_000556-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1223542..1224514+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_000556-T1 ID=KYF_000556-T1|Name=KYF_000556-T1|organism=Aspergillus niger KYF3|type=mRNA|length=973bp|location=Sequence derived from alignment at ch1:1223542..1224514+ (Aspergillus niger KYF3)
ATGCATTCCACCCTCAACCGCGCCCAAGGCGTCTTCGGCTTCTTCACGAC
AGTCGCTCTCTTCGTCGCCGGTCTCGCGGCTCTCAGCGTGTTTCTCTATC
CTACTGACGATGTGACATCCAGTGTGAAGTTGCGCGATGTGAAAGTGTAC
GTGTACCATCTTTCTCCAATCGAATCCAATCCCACCCAATCCAATACCTA
CTACAACAACAACAACAACACAACTACCCCCATAAGCAAGAAGAATGGAA
TAACTAACACAACCAACCCAACAGAACAAAAGGCCGTCCCCACTACTACA
GCACGCGAAAGGAAGAATACGCCGCCATGAAATTCGACCTAGACGCTGGT
ACTTCCATCCCTCCCCCCTCCCCCCTGCTCCTCAACTTCCCCAACACCAC
CACCACCACTACACTAATACTAACCATTCCCTCAATGAACCCAAAGACTT
AACCCCCCTCTTCAACTGGAACACCAAACAACTCTTCGTCTACGTCTACG
CCACCTACCCTTCCGACCCCTCGAATCCAACCACCTCCGCGCCCTCCCAC
TCCGTCATCTGGGACACTATCATCCCCGCCCCGGAGTCGCCTTACTCCTT
TAATGCCCTGCGCGAGAAGTTCTTCCCTTCTGCATCATCTGCGAACAAGA
AGCGCAGCACGAAGAAGACGTCCACTACTAGCAAAACTGCCAAGAAGGCA
TCTGAGCCCGGGAAGCTGAGACTCCGCGACCAGAGAGCCAAGTACTCTAT
CGGAGATGTTTCGGGGAAGATGGCCGAACGGGAGAATGTCACTCTCTCTG
TGGGGTGGAATGTGCAGCCGTGGGTTGGGGCGCTGTGGTGGGCTCCGGAG
ACTGGGGGTGCGATGAGGACGAAGGGCGATGTCGGGACGAGTAAGGCTTT
TGGGCTGCCGGCGCTGAAGGGCAGGAATGTTGGGACTGCTTCTGCTGCTG
GTGCTGGTGCCGGGGCGGCGTAG
back to top

Coding sequence (CDS) from alignment at ch1:1223542..1224514+

>KYF_000556-T1 ID=KYF_000556-T1|Name=KYF_000556-T1|organism=Aspergillus niger KYF3|type=CDS|length=2241bp|location=Sequence derived from alignment at ch1:1223542..1224514+ (Aspergillus niger KYF3)
ATGCATTCCACCCTCAACCGCGCCCAAGGCGTCTTCGGCTTCTTCACGAC
AGTCGCTCTCTTCGTCGCCGGTCTCGCGGCTCTCAGCGTGTTTCTCTATC
CTACTGACGATGTGACATCCAGTGTGAAGTTGCGCGATGTGAAAGTAACA
AAAGGCCGTCCCCACTACTACAGCACGCGAAAGGAAGAATACGCCGCCAT
GAAATTCGACCTAGACGCTGACTTAACCCCCCTCTTCAACTGGAACACCA
AACAACTCTTCGTCTACGTCTACGCCACCTACCCTTCCGACCCCTCGAAT
CCAACCACCTCCGCGCCCTCCCACTCCGTCATCTGGGACACTATCATCCC
CGCCCCGGAGTCGCCTTACTCCTTTAATGCCCTGCGCGAGAAGTTCTTCC
CTTCTGCATCATCTGCGAACAAGAAGCGCAGCACGAAGAAGACGTCCACT
ACTAGCAAAACTGCCAAGAAGGCATCTGAGCCCGGGAAGCTGAGACTCCG
CGACCAGAGAGCCAAGTACTCTATCGGAGATGTTTCGGGGAAGATGGCCG
AACGGGAGAATGTCACTCTCTCTGTGGGGTGGAATGTGCAGCCGTGGGTT
GGGGCGCTGTGGTGGGCTCCGGAGACTGGGGGTGCGATGAGGACGAAGGG
CGATGTCGGGACGAGTAAGGCTTTTGGGCTGCCGGCGCTGAAGGGCAGGA
ATGTTGGGACTGCTTCTGCTGCTGGTGCTGGTGCCGGGGCGGCGTAGATG
CATTCCACCCTCAACCGCGCCCAAGGCGTCTTCGGCTTCTTCACGACAGT
CGCTCTCTTCGTCGCCGGTCTCGCGGCTCTCAGCGTGTTTCTCTATCCTA
CTGACGATGTGACATCCAGTGTGAAGTTGCGCGATGTGAAAGTAACAAAA
GGCCGTCCCCACTACTACAGCACGCGAAAGGAAGAATACGCCGCCATGAA
ATTCGACCTAGACGCTGACTTAACCCCCCTCTTCAACTGGAACACCAAAC
AACTCTTCGTCTACGTCTACGCCACCTACCCTTCCGACCCCTCGAATCCA
ACCACCTCCGCGCCCTCCCACTCCGTCATCTGGGACACTATCATCCCCGC
CCCGGAGTCGCCTTACTCCTTTAATGCCCTGCGCGAGAAGTTCTTCCCTT
CTGCATCATCTGCGAACAAGAAGCGCAGCACGAAGAAGACGTCCACTACT
AGCAAAACTGCCAAGAAGGCATCTGAGCCCGGGAAGCTGAGACTCCGCGA
CCAGAGAGCCAAGTACTCTATCGGAGATGTTTCGGGGAAGATGGCCGAAC
GGGAGAATGTCACTCTCTCTGTGGGGTGGAATGTGCAGCCGTGGGTTGGG
GCGCTGTGGTGGGCTCCGGAGACTGGGGGTGCGATGAGGACGAAGGGCGA
TGTCGGGACGAGTAAGGCTTTTGGGCTGCCGGCGCTGAAGGGCAGGAATG
TTGGGACTGCTTCTGCTGCTGGTGCTGGTGCCGGGGCGGCGTAGATGCAT
TCCACCCTCAACCGCGCCCAAGGCGTCTTCGGCTTCTTCACGACAGTCGC
TCTCTTCGTCGCCGGTCTCGCGGCTCTCAGCGTGTTTCTCTATCCTACTG
ACGATGTGACATCCAGTGTGAAGTTGCGCGATGTGAAAGTAACAAAAGGC
CGTCCCCACTACTACAGCACGCGAAAGGAAGAATACGCCGCCATGAAATT
CGACCTAGACGCTGACTTAACCCCCCTCTTCAACTGGAACACCAAACAAC
TCTTCGTCTACGTCTACGCCACCTACCCTTCCGACCCCTCGAATCCAACC
ACCTCCGCGCCCTCCCACTCCGTCATCTGGGACACTATCATCCCCGCCCC
GGAGTCGCCTTACTCCTTTAATGCCCTGCGCGAGAAGTTCTTCCCTTCTG
CATCATCTGCGAACAAGAAGCGCAGCACGAAGAAGACGTCCACTACTAGC
AAAACTGCCAAGAAGGCATCTGAGCCCGGGAAGCTGAGACTCCGCGACCA
GAGAGCCAAGTACTCTATCGGAGATGTTTCGGGGAAGATGGCCGAACGGG
AGAATGTCACTCTCTCTGTGGGGTGGAATGTGCAGCCGTGGGTTGGGGCG
CTGTGGTGGGCTCCGGAGACTGGGGGTGCGATGAGGACGAAGGGCGATGT
CGGGACGAGTAAGGCTTTTGGGCTGCCGGCGCTGAAGGGCAGGAATGTTG
GGACTGCTTCTGCTGCTGGTGCTGGTGCCGGGGCGGCGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0005787signal peptidase complex
Vocabulary: Biological Process
TermDefinition
GO:0006465signal peptide processing
Vocabulary: Molecular Function
TermDefinition
GO:0008233peptidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_000556KYF_000556Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000556-T1.exon1KYF_000556-T1.exon1Aspergillus niger KYF3exon
KYF_000556-T1.exon2KYF_000556-T1.exon2Aspergillus niger KYF3exon
KYF_000556-T1.exon3KYF_000556-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000556-T1.cdsKYF_000556-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_000556-T1KYF_000556-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007653
DBxrefPFAM:PF04573
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1223542..1224514 +
Powered by Drupal