|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1389369..1390847- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_000617-T1 ID=KYF_000617-T1|Name=KYF_000617-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1479bp|location=Sequence derived from alignment at ch1:1389369..1390847- (Aspergillus niger KYF3)
ATGGCTTCCAATACAATTCCTAGTCCTGCTTCGGAGACTGTTGCTCCTGG
CAAATCCGACTTTTCTCAGAAAAACAATGCCTCCCCAGCTCGTCGTTCGC
GGCCTCCAAGGCCCAATTACCGACACATCCATCGCTTCCCCTTCCCGGTC
GAGGTGCATCCTCTCCCTCCTCTCATCCCCCATAACCCTCTCTCGCTCGT
CAGTGTGCTGCTGTCCTACCTGACGTACTTTATTTCTCCCCCTCATCAGG
AAGTCTACTCCGCCTACTTTGACTCGGCCACATCCTCGGTTCATGTCACA
GACCCTAAGGCTATAAAAGCCCTCTGGGAGATGGGTTTCTTTGGTAAGGG
AACCCTGAGTCGAAGTGAGCCGAGCTGGCTTGAGCGTGAGAAGAAGAGAC
GAGGATTACTTGGGGGGATGACTAGCGAAGAGGTCACACGACAGCGGCGG
ACGGAACGTCGCGAGTTGAAACTGGAGCGCGCGAGGATGGAAAAGCTTGC
CATTGAGGAGAGACTCAAGGCCGAAGCGGCTGCCAGGGAAGGCACTGCGA
CGCCAAACGAACAGTCATCCCTCTCACCCACTCCGAATGGTGTCTCTGAA
GGCACAGTACCAATTACGGAGAAGTTCTCCCTGAGAAAAGCACGGGAAGC
CAGGGAAGCCAAGCTCCTTGAGTCACAACGTCCAGTATCACAAGACGGCA
ATACACGCACCCCTAACTCCGCCGGAAAGCGGTCACCTAGTGGCAGCAAA
ACTGTGCGGTTTTCTCCGGTTGTTCAAGCCAAGGAGTTCGCTTCTGATTC
GGCTATCTTGAGCTTGCCAGAAATGTCTGCAGATAGAAATACGGACGGAG
GTAAGGCGAATGATGAGCCAGAATTAAGTAATGAAGAGCACCTTCAATTA
TCTAACGAAGAGGCCTTCTTCCTTGCATATGGGCTGGGAGTCTTGCGTGT
GCGCGATGATACTCGCACATCCGAGATTCCTACATCTTCCCTGTTGCCAT
TATTATGTCAACACTCTTACTTCCCTCCTGGAGCTCCGTCAGCGGATCCC
ACGCCGGACGACCCATTCATGATATCCTATGTTGTGTACCACCATTTCCG
GTCTTTGGGGTGGGTTGTGCGCTCCGGAGTGAAATTCGGTGTGGACTATA
TCCTCTACAACCGTGGGCCGGTCTTCTCACATGCTGAGTTTGCTGTCGTG
GTTGTCCCGTCCTATGGTCATGGCTACTGGTCTGAAACGGCCGAGCGCAA
GGCCCAGTGTGAGGAGAAGATGGCGCGCAGTTGGTGGTGGCTGCATTGTG
TCAATCGAGTCCAGGCCCAGGTGAAGAAGAGCTTGGTAGTATGCTATGTG
GAAGTGCCTCCGCCAACGTCCTACGAGCTTGACACTCCCTCGGAAGAGGA
TATTGGTGCAATGTTGGCTCGTTATCAAGTCCGGGAGATGGTTATTCGAA
GATGGGTCCCCAATCGGACTCGGGACTAA back to topCoding sequence (CDS) from alignment at ch1:1389369..1390847- >KYF_000617-T1 ID=KYF_000617-T1|Name=KYF_000617-T1|organism=Aspergillus niger KYF3|type=CDS|length=1479bp|location=Sequence derived from alignment at ch1:1389369..1390847- (Aspergillus niger KYF3)
ATGGCTTCCAATACAATTCCTAGTCCTGCTTCGGAGACTGTTGCTCCTGG
CAAATCCGACTTTTCTCAGAAAAACAATGCCTCCCCAGCTCGTCGTTCGC
GGCCTCCAAGGCCCAATTACCGACACATCCATCGCTTCCCCTTCCCGGTC
GAGGTGCATCCTCTCCCTCCTCTCATCCCCCATAACCCTCTCTCGCTCGT
CAGTGTGCTGCTGTCCTACCTGACGTACTTTATTTCTCCCCCTCATCAGG
AAGTCTACTCCGCCTACTTTGACTCGGCCACATCCTCGGTTCATGTCACA
GACCCTAAGGCTATAAAAGCCCTCTGGGAGATGGGTTTCTTTGGTAAGGG
AACCCTGAGTCGAAGTGAGCCGAGCTGGCTTGAGCGTGAGAAGAAGAGAC
GAGGATTACTTGGGGGGATGACTAGCGAAGAGGTCACACGACAGCGGCGG
ACGGAACGTCGCGAGTTGAAACTGGAGCGCGCGAGGATGGAAAAGCTTGC
CATTGAGGAGAGACTCAAGGCCGAAGCGGCTGCCAGGGAAGGCACTGCGA
CGCCAAACGAACAGTCATCCCTCTCACCCACTCCGAATGGTGTCTCTGAA
GGCACAGTACCAATTACGGAGAAGTTCTCCCTGAGAAAAGCACGGGAAGC
CAGGGAAGCCAAGCTCCTTGAGTCACAACGTCCAGTATCACAAGACGGCA
ATACACGCACCCCTAACTCCGCCGGAAAGCGGTCACCTAGTGGCAGCAAA
ACTGTGCGGTTTTCTCCGGTTGTTCAAGCCAAGGAGTTCGCTTCTGATTC
GGCTATCTTGAGCTTGCCAGAAATGTCTGCAGATAGAAATACGGACGGAG
GTAAGGCGAATGATGAGCCAGAATTAAGTAATGAAGAGCACCTTCAATTA
TCTAACGAAGAGGCCTTCTTCCTTGCATATGGGCTGGGAGTCTTGCGTGT
GCGCGATGATACTCGCACATCCGAGATTCCTACATCTTCCCTGTTGCCAT
TATTATGTCAACACTCTTACTTCCCTCCTGGAGCTCCGTCAGCGGATCCC
ACGCCGGACGACCCATTCATGATATCCTATGTTGTGTACCACCATTTCCG
GTCTTTGGGGTGGGTTGTGCGCTCCGGAGTGAAATTCGGTGTGGACTATA
TCCTCTACAACCGTGGGCCGGTCTTCTCACATGCTGAGTTTGCTGTCGTG
GTTGTCCCGTCCTATGGTCATGGCTACTGGTCTGAAACGGCCGAGCGCAA
GGCCCAGTGTGAGGAGAAGATGGCGCGCAGTTGGTGGTGGCTGCATTGTG
TCAATCGAGTCCAGGCCCAGGTGAAGAAGAGCTTGGTAGTATGCTATGTG
GAAGTGCCTCCGCCAACGTCCTACGAGCTTGACACTCCCTCGGAAGAGGA
TATTGGTGCAATGTTGGCTCGTTATCAAGTCCGGGAGATGGTTATTCGAA
GATGGGTCCCCAATCGGACTCGGGACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000214 | tRNA-intron endonuclease complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004518 | nuclease activity |
| GO:0003676 | nucleic acid binding |
| GO:0000213 | tRNA-intron endonuclease activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262WXK |
| DBxref | InterPro:IPR036167 |
| DBxref | InterPro:IPR016589 |
| DBxref | InterPro:IPR011856 |
| DBxref | InterPro:IPR006677 |
| DBxref | PFAM:PF01974 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1389369..1390847 - |
|
