You are here

Home

KYF_000623-T1, KYF_000623-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_000623-T1
Unique NameKYF_000623-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1402161..1403883-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_000623-T1 ID=KYF_000623-T1|Name=KYF_000623-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1723bp|location=Sequence derived from alignment at ch1:1402161..1403883- (Aspergillus niger KYF3)
ATGGTCACTATCACCGCCAAATCTGAGGCAGCTTCTGCTACTTCCCCTAT
TTCTTCCAATACTATCACTACTACCCTCAACGGGGTAGGCGATCCCAAAA
ATAAAGAAAAAGATCTTCAACTTCAAGAAAAAGAAGGAGAAGAAGAAGAA
ATATCCAAAGAAACCAAAGCATACAACTCCTCCAACGGCGTAACCAGCCA
ACTCTGCACCTGGATCGCCTCCCTCCAGCTGGACGACATCCCAGACTCTG
TCCGCACCCGCGCTAAATACCTCTTCCTCGATGGCATTGCCTGTGCCCTC
GTTGGTGCGCGCGTCCCATGGTCGCAGAAAGCATTTGACGCGATGACTGC
CTTCGAGGAGAGGGGGAAGCATGTGGTCATTGGGTATGAAGAGGTATTTC
TCCCTCCTACCTATATAATCTTTTCATCCATGCTATTACATGGATGAATG
GATAGAGTTAGGATTATAAAGGTACTAATGGATTTGGCAGCGCCTCGGTG
CCATCGCCGCCGCAACCCTCAACGGCTCCTGGATCCAAGCCTGCGAAGTA
GACGACTACCACAGCGTGGCGCCTTTGCACTCCCAAGCCGTGGTCATCCC
TCCTCTCTTCGCGGCAGCCGTCGGTGCGCGGGACCATCCGACCACCCCGC
GCATCATCGACGGACGAACACTTCTTCTTGCCTCGGTAGTGGGGTTCGAA
ATTGGTCCCCGCGTCGGCATGGCGCTGCACGGCACGGAGATGCTCGCCAA
GGGATGGCACTGCGGTTCTGTTTTTGGTGCACCCGCGGCTGCAGGTAGTT
CCGCAAAACTCCTCGGTTTGTCAGCTGGTCAAATCGAAGACGCGATCGGA
GTAGCAGCGACGCAGGCATGCGGGCTCATGGCGGCGCAGTACGACGGGAT
GGTGAAGCGGATGCATCACGGGTTCGCGGCGCGGAATGGACTGTTGGGAA
CGATGTTGGCGTGGGGAGGATACGAAGGGATCAAGAAGGTGTTTGAGCGG
CCGTATGGAGGGTTTCTGGCGATGTTTGGACTGGGGTCGAAGCATACGCC
TAGTTCGAAGCCAGAGGAGGTGGCGAAGGATTTGGGGACGTTTTGGCATA
CGGCGGAATGGATTCGGTTGAAGTTGCATGCGTGCTGTGGGGGGATTCAT
GGCACGATTGAGTGTTTGGCGGAGATGCAGGAGATGTATCCGGAACGACT
TGGACGGGAGAAATTAGGAGAGATCAAGGAGATTCGGATTCAATTGAGTG
ATGCGGTGTTTCATCACTGTGGATGGGCGCCGGAGACGAGGCCGCTGACG
CCGACGGGGGCGCAGATGAATACGGCGTTTGTGGCGGCGTCACAGTTGGT
GGATGGACAGGTGTTGTTGGAGCAATTTTCGTCGGGGAAGCTGGATCGGA
ATGAGGTTTGGGAGTTGATCGGGAAGACGAGTTGTGTGCATACGACGGAG
TTGGATCAGCCGAATATTGGGTGTGGTGCGTTGATTTCGATCACGTTTGC
GGATGGTAGTCAGGTTCAGCATTCGTTGTTGAAGCCGAAGGGGGTGGACG
AACCGATTTCGAATGAGGAGATCTTGGAGAAGTTTCGTCGGCTGACAGGA
GGGTTGATCGGGGTGGAGAGGCAGGAGAAGATTGAACGAGCTGTGCTGGG
GATGGAGGAGTTGCAGGATGTGAACGAGTTGATTGAGTTGCTGAGTGTGA
ATGTGGTCAATCCGTTGCAGTAG
back to top

Coding sequence (CDS) from alignment at ch1:1402161..1403883-

>KYF_000623-T1 ID=KYF_000623-T1|Name=KYF_000623-T1|organism=Aspergillus niger KYF3|type=CDS|length=3252bp|location=Sequence derived from alignment at ch1:1402161..1403883- (Aspergillus niger KYF3)
CGCCTCGGTGCCATCGCCGCCGCAACCCTCAACGGCTCCTGGATCCAAGC
CTGCGAAGTAGACGACTACCACAGCGTGGCGCCTTTGCACTCCCAAGCCG
TGGTCATCCCTCCTCTCTTCGCGGCAGCCGTCGGTGCGCGGGACCATCCG
ACCACCCCGCGCATCATCGACGGACGAACACTTCTTCTTGCCTCGGTAGT
GGGGTTCGAAATTGGTCCCCGCGTCGGCATGGCGCTGCACGGCACGGAGA
TGCTCGCCAAGGGATGGCACTGCGGTTCTGTTTTTGGTGCACCCGCGGCT
GCAGGTAGTTCCGCAAAACTCCTCGGTTTGTCAGCTGGTCAAATCGAAGA
CGCGATCGGAGTAGCAGCGACGCAGGCATGCGGGCTCATGGCGGCGCAGT
ACGACGGGATGGTGAAGCGGATGCATCACGGGTTCGCGGCGCGGAATGGA
CTGTTGGGAACGATGTTGGCGTGGGGAGGATACGAAGGGATCAAGAAGGT
GTTTGAGCGGCCGTATGGAGGGTTTCTGGCGATGTTTGGACTGGGGTCGA
AGCATACGCCTAGTTCGAAGCCAGAGGAGGTGGCGAAGGATTTGGGGACG
TTTTGGCATACGGCGGAATGGATTCGGTTGAAGTTGCATGCGTGCTGTGG
GGGGATTCATGGCACGATTGAGTGTTTGGCGGAGATGCAGGAGATGTATC
CGGAACGACTTGGACGGGAGAAATTAGGAGAGATCAAGGAGATTCGGATT
CAATTGAGTGATGCGGTGTTTCATCACTGTGGATGGGCGCCGGAGACGAG
GCCGCTGACGCCGACGGGGGCGCAGATGAATACGGCGTTTGTGGCGGCGT
CACAGTTGGTGGATGGACAGGTGTTGTTGGAGCAATTTTCGTCGGGGAAG
CTGGATCGGAATGAGGTTTGGGAGTTGATCGGGAAGACGAGTTGTGTGCA
TACGACGGAGTTGGATCAGCCGAATATTGGGTGTGGTGCGTTGATTTCGA
TCACGTTTGCGGATGGTAGTCAGGTTCAGCATTCGTTGTTGAAGCCGAAG
GGGGTGGACGAACCGATTTCGAATGAGGAGATCTTGGAGAAGTTTCGTCG
GCTGACAGGAGGGTTGATCGGGGTGGAGAGGCAGGAGAAGATTGAACGAG
CTGTGCTGGGGATGGAGGAGTTGCAGGATGTGAACGAGTTGATTGAGTTG
CTGAGTGTGAATGTGGTCAATCCGTTGCAGTAGATGGTCACTATCACCGC
CAAATCTGAGGCAGCTTCTGCTACTTCCCCTATTTCTTCCAATACTATCA
CTACTACCCTCAACGGGGTAGGCGATCCCAAAAATAAAGAAAAAGATCTT
CAACTTCAAGAAAAAGAAGGAGAAGAAGAAGAAATATCCAAAGAAACCAA
AGCATACAACTCCTCCAACGGCGTAACCAGCCAACTCTGCACCTGGATCG
CCTCCCTCCAGCTGGACGACATCCCAGACTCTGTCCGCACCCGCGCTAAA
TACCTCTTCCTCGATGGCATTGCCTGTGCCCTCGTTGGTGCGCGCGTCCC
ATGGTCGCAGAAAGCATTTGACGCGATGACTGCCTTCGAGGAGAGGGGGA
AGCATGTGGTCATTGGGTATGAAGAGCGCCTCGGTGCCATCGCCGCCGCA
ACCCTCAACGGCTCCTGGATCCAAGCCTGCGAAGTAGACGACTACCACAG
CGTGGCGCCTTTGCACTCCCAAGCCGTGGTCATCCCTCCTCTCTTCGCGG
CAGCCGTCGGTGCGCGGGACCATCCGACCACCCCGCGCATCATCGACGGA
CGAACACTTCTTCTTGCCTCGGTAGTGGGGTTCGAAATTGGTCCCCGCGT
CGGCATGGCGCTGCACGGCACGGAGATGCTCGCCAAGGGATGGCACTGCG
GTTCTGTTTTTGGTGCACCCGCGGCTGCAGGTAGTTCCGCAAAACTCCTC
GGTTTGTCAGCTGGTCAAATCGAAGACGCGATCGGAGTAGCAGCGACGCA
GGCATGCGGGCTCATGGCGGCGCAGTACGACGGGATGGTGAAGCGGATGC
ATCACGGGTTCGCGGCGCGGAATGGACTGTTGGGAACGATGTTGGCGTGG
GGAGGATACGAAGGGATCAAGAAGGTGTTTGAGCGGCCGTATGGAGGGTT
TCTGGCGATGTTTGGACTGGGGTCGAAGCATACGCCTAGTTCGAAGCCAG
AGGAGGTGGCGAAGGATTTGGGGACGTTTTGGCATACGGCGGAATGGATT
CGGTTGAAGTTGCATGCGTGCTGTGGGGGGATTCATGGCACGATTGAGTG
TTTGGCGGAGATGCAGGAGATGTATCCGGAACGACTTGGACGGGAGAAAT
TAGGAGAGATCAAGGAGATTCGGATTCAATTGAGTGATGCGGTGTTTCAT
CACTGTGGATGGGCGCCGGAGACGAGGCCGCTGACGCCGACGGGGGCGCA
GATGAATACGGCGTTTGTGGCGGCGTCACAGTTGGTGGATGGACAGGTGT
TGTTGGAGCAATTTTCGTCGGGGAAGCTGGATCGGAATGAGGTTTGGGAG
TTGATCGGGAAGACGAGTTGTGTGCATACGACGGAGTTGGATCAGCCGAA
TATTGGGTGTGGTGCGTTGATTTCGATCACGTTTGCGGATGGTAGTCAGG
TTCAGCATTCGTTGTTGAAGCCGAAGGGGGTGGACGAACCGATTTCGAAT
GAGGAGATCTTGGAGAAGTTTCGTCGGCTGACAGGAGGGTTGATCGGGGT
GGAGAGGCAGGAGAAGATTGAACGAGCTGTGCTGGGGATGGAGGAGTTGC
AGGATGTGAACGAGTTGATTGAGTTGCTGAGTGTGAATGTGGTCAATCCG
TTGCAGTAGATGGTCACTATCACCGCCAAATCTGAGGCAGCTTCTGCTAC
TTCCCCTATTTCTTCCAATACTATCACTACTACCCTCAACGGGGTAGGCG
ATCCCAAAAATAAAGAAAAAGATCTTCAACTTCAAGAAAAAGAAGGAGAA
GAAGAAGAAATATCCAAAGAAACCAAAGCATACAACTCCTCCAACGGCGT
AACCAGCCAACTCTGCACCTGGATCGCCTCCCTCCAGCTGGACGACATCC
CAGACTCTGTCCGCACCCGCGCTAAATACCTCTTCCTCGATGGCATTGCC
TGTGCCCTCGTTGGTGCGCGCGTCCCATGGTCGCAGAAAGCATTTGACGC
GATGACTGCCTTCGAGGAGAGGGGGAAGCATGTGGTCATTGGGTATGAAG
AG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_000623KYF_000623Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_000623-T1KYF_000623-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000623-T1.cdsKYF_000623-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000623-T1.exon2KYF_000623-T1.exon2Aspergillus niger KYF3exon
KYF_000623-T1.exon1KYF_000623-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR036148
DBxrefInterPro:IPR042188
DBxrefInterPro:IPR005656
DBxrefInterPro:IPR042183
DBxrefPFAM:PF03972
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1402161..1403883 -
Powered by Drupal