You are here

Home

KYF_000788-T1, KYF_000788-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_000788-T1
Unique NameKYF_000788-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1976888..1979574-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_000788-T1 ID=KYF_000788-T1|Name=KYF_000788-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2687bp|location=Sequence derived from alignment at ch1:1976888..1979574- (Aspergillus niger KYF3)
ATGTCGCGCTTTTTCTACGGTGGCGGTAGCGACAGCGAGTCCAGCTCCTC
TGAGGAGGAGGAGCTCTACAGTGATCGCGAGGAGGAGGAGCAGTCCGAGG
AGGAGTCCAGCGAGGAAGAGTCTGAGGAGGAGGAGGAGTCCTCTTCCGAG
GACGAGGATGCCGGCAAGACCGGTGCCAACCGTTTCATGAAGAATGTTTC
CGAAAGCGAAGAAAGCGAGGATGAGGAACGAGTAACTATCGTCAAGAGTG
CCAAGGACAAGCGGTTGGAGGAACTCGAAAACACCGTCAAGTTGATTGAA
AATGCCGAGAAGATCAGCGACTGGGCGGTTATCTCGACAGGTGCGTTTGG
CCCTGGAATCAAAGAATGGAATTGCGGGACCGGCAGCGGAGGGAAGGATG
GGTTTTTGATACTAACATCCGTTTTATAGAGTTTGACAAGCTGAACCGTC
AAATCGTCAAGATTGTCCAGTCTGGCCCGACCCCGAAGATCTACGTCAAG
ACCGTTGCGGACCTGGAGGATTTCGTCAACGAGACCATCTCGAAGCAGAA
GTCGAGCAACAAGAAGATGAACGCCAGCAACGCCAAGGGATTCAACGCCG
TTAAGCAGCGTATCAAGAAGAACAACAAGGACTACGCCGTTCAGATCGAC
AAGTACAGGAAGGACAAGGATGGCTTCATGGAAGCCAAGGAGGAAGTGGC
CCGTCCCGTCGCCGCCGCCCCTCGCCTGACCAAGATTGAGCGTATCGAAG
CCCCTGCTCTTTCCACCGCCGGTGATGACGATGGTTTTGCGACCGTTGGC
CGTGGCGGCAAGACCCTCCAGTACACCCCCGAGAGCATCCTGAAGCACCT
CCGCGTTATCGTCGAATCCCGCGGAAAGAAGAACACCGACCGTTTGGAGC
AGATCCGCACGATGGAGAAGCTGTTGGAGGTTGCCCAGACTCCTTACCAG
CGTATCCGCATCTACTTGACCATGATCTCCACCCGCTTCGATCTCACCTC
TTCCTCTACCAGCAACTACATGGCCGTCGATCAGTGGAAGTTCGCCGAGC
AGGAGTTCGCTACCCTTCTGTCCGTTCTCGAGAACAACCGCACCTATGTC
GTGACCGAGGGTGCCGAAGAGTGGGAGGATGATGAGAAGCAGCCCACACC
CGCCCCCGGCGAGGTCGTTCACATCCCCGGCAGCATTGTCTCGTATGTCG
AGAGACTGGATGATGAGCTCACCCGTTCCCTGCAGCACATTGACCCCCAC
ACTGCCGAGTACATCGACCGTCTGGGTGATGAGAAGCAGCTGTACGCCAA
CCTTGTGCGCACCCAGGTCTACGTCGAGGGTCTTACTCAGTCCGAGAAGA
CCGATCCCCGTCAGGACAGCCTTAACCGCGTGGTCATGAGGAGACTGGAG
CACATCTACTTCAAGCCCTCTCAGGTCGTCACGATCCTGGAGGAAGGTAC
CTGGAAGGTCCTTCCCTCCGAATTGGAATCCAACGTCACTCCCCGTGGCA
ACACGGGAGATGTGACCAACCTTGTGCAGACCCTTTGCAGCTACCTGTTC
AAGCACAGCGACGGTATCATCCGTGCTCGTGCGATGCTGTGCCAGATCTA
CTTCCTTGCTCTGCACGACCAGTACTACCGCTCTCGTGACCTGATGCTCA
TGTCCCACCTTACCGAGAACATCGCCAACTTCGACGTTTCCACCCAGATC
CTCTTCAACCGCACCCTTGTTCAGATCGGTCTGTGTGCCTTCCGGGCCGG
CCTGATCTACGAGGCTCAGACCACCCTCTCTGAGGTCTGCGGCAGTGGAC
GTCAGAAAGAGCTGTTGGCTCAGGGCATCATCCTCCAGCGCTACTCCACC
GTCTCGCCGGAACAGGAGCGTCTGGAGCGTCAGCGTCAGCTGCCCTTCCA
CATGCACATCAACCTGGAGCTTCTCGAGTGCATCTACCTGACGTCGAGCA
TGTTCCTGGAGGTCCCTCTGATGGCTCAGACTTCTTCCTCCCCCGAGATG
AAGCGTCGTGTCATCTCCAAGACCTTCCGTCGTATGCTGGACTACAACGA
GCGCCAGGTCTTCACTGGTCCTGCTGAGAACACCCGTGACGGTGTCATCA
TGAGTGCCAAGTTCCTCGCCGCCGGAGACTGGAAGAAGGCCGCTGAGATG
CTCAACTCGATCAAGATCTGGGATCTGATGCCCCAGCCCGACAAGGTCAA
GGAGATGCTGTCCCAGCAGATCCAGGAGGAGGGTCTCCGCACCTACCTCT
TCACCTACGCCCCCTTCTACGACAGCCTCTCCATCTCCACCCTGGCTACC
ATGTTCGAGCTCCCCGAGAAGAAGATCGCCGCTATCATCAGCCGTATGAT
CTCTCACGAGGAATTGGCCGCTGCTCTCGACCAGGTCAACGATGCCATTG
TCTTCCGCAAGGGTGTCGAGTTGTCGCGTCTCCAGTCCCAGATCGTCACC
CTCGCCGACAAGTCGATGAACCTTCTGGAGTCCAACGAAAAGACTCTCGA
GCAGCGTACGCAAGGCATGGCCAACGCCTTCCAGCGCGATCAGGGCGCCG
GCGCCCGTGGTGGCCGTGGTCCTCGAGGTGGTGGCCAAGCCCGTGGTGGT
CCCAGATTCCCTGGTGGCCAACAAGGTCGTCGGCCTGGTGGACAGCAGTT
TAGCGGTGGTGCATTGGGCGGGGCGATCAAGGCATAA
back to top

Coding sequence (CDS) from alignment at ch1:1976888..1979574-

>KYF_000788-T1 ID=KYF_000788-T1|Name=KYF_000788-T1|organism=Aspergillus niger KYF3|type=CDS|length=5196bp|location=Sequence derived from alignment at ch1:1976888..1979574- (Aspergillus niger KYF3)
AGTTTGACAAGCTGAACCGTCAAATCGTCAAGATTGTCCAGTCTGGCCCG
ACCCCGAAGATCTACGTCAAGACCGTTGCGGACCTGGAGGATTTCGTCAA
CGAGACCATCTCGAAGCAGAAGTCGAGCAACAAGAAGATGAACGCCAGCA
ACGCCAAGGGATTCAACGCCGTTAAGCAGCGTATCAAGAAGAACAACAAG
GACTACGCCGTTCAGATCGACAAGTACAGGAAGGACAAGGATGGCTTCAT
GGAAGCCAAGGAGGAAGTGGCCCGTCCCGTCGCCGCCGCCCCTCGCCTGA
CCAAGATTGAGCGTATCGAAGCCCCTGCTCTTTCCACCGCCGGTGATGAC
GATGGTTTTGCGACCGTTGGCCGTGGCGGCAAGACCCTCCAGTACACCCC
CGAGAGCATCCTGAAGCACCTCCGCGTTATCGTCGAATCCCGCGGAAAGA
AGAACACCGACCGTTTGGAGCAGATCCGCACGATGGAGAAGCTGTTGGAG
GTTGCCCAGACTCCTTACCAGCGTATCCGCATCTACTTGACCATGATCTC
CACCCGCTTCGATCTCACCTCTTCCTCTACCAGCAACTACATGGCCGTCG
ATCAGTGGAAGTTCGCCGAGCAGGAGTTCGCTACCCTTCTGTCCGTTCTC
GAGAACAACCGCACCTATGTCGTGACCGAGGGTGCCGAAGAGTGGGAGGA
TGATGAGAAGCAGCCCACACCCGCCCCCGGCGAGGTCGTTCACATCCCCG
GCAGCATTGTCTCGTATGTCGAGAGACTGGATGATGAGCTCACCCGTTCC
CTGCAGCACATTGACCCCCACACTGCCGAGTACATCGACCGTCTGGGTGA
TGAGAAGCAGCTGTACGCCAACCTTGTGCGCACCCAGGTCTACGTCGAGG
GTCTTACTCAGTCCGAGAAGACCGATCCCCGTCAGGACAGCCTTAACCGC
GTGGTCATGAGGAGACTGGAGCACATCTACTTCAAGCCCTCTCAGGTCGT
CACGATCCTGGAGGAAGGTACCTGGAAGGTCCTTCCCTCCGAATTGGAAT
CCAACGTCACTCCCCGTGGCAACACGGGAGATGTGACCAACCTTGTGCAG
ACCCTTTGCAGCTACCTGTTCAAGCACAGCGACGGTATCATCCGTGCTCG
TGCGATGCTGTGCCAGATCTACTTCCTTGCTCTGCACGACCAGTACTACC
GCTCTCGTGACCTGATGCTCATGTCCCACCTTACCGAGAACATCGCCAAC
TTCGACGTTTCCACCCAGATCCTCTTCAACCGCACCCTTGTTCAGATCGG
TCTGTGTGCCTTCCGGGCCGGCCTGATCTACGAGGCTCAGACCACCCTCT
CTGAGGTCTGCGGCAGTGGACGTCAGAAAGAGCTGTTGGCTCAGGGCATC
ATCCTCCAGCGCTACTCCACCGTCTCGCCGGAACAGGAGCGTCTGGAGCG
TCAGCGTCAGCTGCCCTTCCACATGCACATCAACCTGGAGCTTCTCGAGT
GCATCTACCTGACGTCGAGCATGTTCCTGGAGGTCCCTCTGATGGCTCAG
ACTTCTTCCTCCCCCGAGATGAAGCGTCGTGTCATCTCCAAGACCTTCCG
TCGTATGCTGGACTACAACGAGCGCCAGGTCTTCACTGGTCCTGCTGAGA
ACACCCGTGACGGTGTCATCATGAGTGCCAAGTTCCTCGCCGCCGGAGAC
TGGAAGAAGGCCGCTGAGATGCTCAACTCGATCAAGATCTGGGATCTGAT
GCCCCAGCCCGACAAGGTCAAGGAGATGCTGTCCCAGCAGATCCAGGAGG
AGGGTCTCCGCACCTACCTCTTCACCTACGCCCCCTTCTACGACAGCCTC
TCCATCTCCACCCTGGCTACCATGTTCGAGCTCCCCGAGAAGAAGATCGC
CGCTATCATCAGCCGTATGATCTCTCACGAGGAATTGGCCGCTGCTCTCG
ACCAGGTCAACGATGCCATTGTCTTCCGCAAGGGTGTCGAGTTGTCGCGT
CTCCAGTCCCAGATCGTCACCCTCGCCGACAAGTCGATGAACCTTCTGGA
GTCCAACGAAAAGACTCTCGAGCAGCGTACGCAAGGCATGGCCAACGCCT
TCCAGCGCGATCAGGGCGCCGGCGCCCGTGGTGGCCGTGGTCCTCGAGGT
GGTGGCCAAGCCCGTGGTGGTCCCAGATTCCCTGGTGGCCAACAAGGTCG
TCGGCCTGGTGGACAGCAGTTTAGCGGTGGTGCATTGGGCGGGGCGATCA
AGGCATAAATGTCGCGCTTTTTCTACGGTGGCGGTAGCGACAGCGAGTCC
AGCTCCTCTGAGGAGGAGGAGCTCTACAGTGATCGCGAGGAGGAGGAGCA
GTCCGAGGAGGAGTCCAGCGAGGAAGAGTCTGAGGAGGAGGAGGAGTCCT
CTTCCGAGGACGAGGATGCCGGCAAGACCGGTGCCAACCGTTTCATGAAG
AATGTTTCCGAAAGCGAAGAAAGCGAGGATGAGGAACGAGTAACTATCGT
CAAGAGTGCCAAGGACAAGCGGTTGGAGGAACTCGAAAACACCGTCAAGT
TGATTGAAAATGCCGAGAAGATCAGCGACTGGGCGGTTATCTCGACAGAG
TTTGACAAGCTGAACCGTCAAATCGTCAAGATTGTCCAGTCTGGCCCGAC
CCCGAAGATCTACGTCAAGACCGTTGCGGACCTGGAGGATTTCGTCAACG
AGACCATCTCGAAGCAGAAGTCGAGCAACAAGAAGATGAACGCCAGCAAC
GCCAAGGGATTCAACGCCGTTAAGCAGCGTATCAAGAAGAACAACAAGGA
CTACGCCGTTCAGATCGACAAGTACAGGAAGGACAAGGATGGCTTCATGG
AAGCCAAGGAGGAAGTGGCCCGTCCCGTCGCCGCCGCCCCTCGCCTGACC
AAGATTGAGCGTATCGAAGCCCCTGCTCTTTCCACCGCCGGTGATGACGA
TGGTTTTGCGACCGTTGGCCGTGGCGGCAAGACCCTCCAGTACACCCCCG
AGAGCATCCTGAAGCACCTCCGCGTTATCGTCGAATCCCGCGGAAAGAAG
AACACCGACCGTTTGGAGCAGATCCGCACGATGGAGAAGCTGTTGGAGGT
TGCCCAGACTCCTTACCAGCGTATCCGCATCTACTTGACCATGATCTCCA
CCCGCTTCGATCTCACCTCTTCCTCTACCAGCAACTACATGGCCGTCGAT
CAGTGGAAGTTCGCCGAGCAGGAGTTCGCTACCCTTCTGTCCGTTCTCGA
GAACAACCGCACCTATGTCGTGACCGAGGGTGCCGAAGAGTGGGAGGATG
ATGAGAAGCAGCCCACACCCGCCCCCGGCGAGGTCGTTCACATCCCCGGC
AGCATTGTCTCGTATGTCGAGAGACTGGATGATGAGCTCACCCGTTCCCT
GCAGCACATTGACCCCCACACTGCCGAGTACATCGACCGTCTGGGTGATG
AGAAGCAGCTGTACGCCAACCTTGTGCGCACCCAGGTCTACGTCGAGGGT
CTTACTCAGTCCGAGAAGACCGATCCCCGTCAGGACAGCCTTAACCGCGT
GGTCATGAGGAGACTGGAGCACATCTACTTCAAGCCCTCTCAGGTCGTCA
CGATCCTGGAGGAAGGTACCTGGAAGGTCCTTCCCTCCGAATTGGAATCC
AACGTCACTCCCCGTGGCAACACGGGAGATGTGACCAACCTTGTGCAGAC
CCTTTGCAGCTACCTGTTCAAGCACAGCGACGGTATCATCCGTGCTCGTG
CGATGCTGTGCCAGATCTACTTCCTTGCTCTGCACGACCAGTACTACCGC
TCTCGTGACCTGATGCTCATGTCCCACCTTACCGAGAACATCGCCAACTT
CGACGTTTCCACCCAGATCCTCTTCAACCGCACCCTTGTTCAGATCGGTC
TGTGTGCCTTCCGGGCCGGCCTGATCTACGAGGCTCAGACCACCCTCTCT
GAGGTCTGCGGCAGTGGACGTCAGAAAGAGCTGTTGGCTCAGGGCATCAT
CCTCCAGCGCTACTCCACCGTCTCGCCGGAACAGGAGCGTCTGGAGCGTC
AGCGTCAGCTGCCCTTCCACATGCACATCAACCTGGAGCTTCTCGAGTGC
ATCTACCTGACGTCGAGCATGTTCCTGGAGGTCCCTCTGATGGCTCAGAC
TTCTTCCTCCCCCGAGATGAAGCGTCGTGTCATCTCCAAGACCTTCCGTC
GTATGCTGGACTACAACGAGCGCCAGGTCTTCACTGGTCCTGCTGAGAAC
ACCCGTGACGGTGTCATCATGAGTGCCAAGTTCCTCGCCGCCGGAGACTG
GAAGAAGGCCGCTGAGATGCTCAACTCGATCAAGATCTGGGATCTGATGC
CCCAGCCCGACAAGGTCAAGGAGATGCTGTCCCAGCAGATCCAGGAGGAG
GGTCTCCGCACCTACCTCTTCACCTACGCCCCCTTCTACGACAGCCTCTC
CATCTCCACCCTGGCTACCATGTTCGAGCTCCCCGAGAAGAAGATCGCCG
CTATCATCAGCCGTATGATCTCTCACGAGGAATTGGCCGCTGCTCTCGAC
CAGGTCAACGATGCCATTGTCTTCCGCAAGGGTGTCGAGTTGTCGCGTCT
CCAGTCCCAGATCGTCACCCTCGCCGACAAGTCGATGAACCTTCTGGAGT
CCAACGAAAAGACTCTCGAGCAGCGTACGCAAGGCATGGCCAACGCCTTC
CAGCGCGATCAGGGCGCCGGCGCCCGTGGTGGCCGTGGTCCTCGAGGTGG
TGGCCAAGCCCGTGGTGGTCCCAGATTCCCTGGTGGCCAACAAGGTCGTC
GGCCTGGTGGACAGCAGTTTAGCGGTGGTGCATTGGGCGGGGCGATCAAG
GCATAAATGTCGCGCTTTTTCTACGGTGGCGGTAGCGACAGCGAGTCCAG
CTCCTCTGAGGAGGAGGAGCTCTACAGTGATCGCGAGGAGGAGGAGCAGT
CCGAGGAGGAGTCCAGCGAGGAAGAGTCTGAGGAGGAGGAGGAGTCCTCT
TCCGAGGACGAGGATGCCGGCAAGACCGGTGCCAACCGTTTCATGAAGAA
TGTTTCCGAAAGCGAAGAAAGCGAGGATGAGGAACGAGTAACTATCGTCA
AGAGTGCCAAGGACAAGCGGTTGGAGGAACTCGAAAACACCGTCAAGTTG
ATTGAAAATGCCGAGAAGATCAGCGACTGGGCGGTTATCTCGACAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003743translation initiation factor activity
GO:0031369translation initiation factor binding
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NIP1KYF_000788Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_000788-T1KYF_000788-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000788-T1.cdsKYF_000788-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000788-T1.exon2KYF_000788-T1.exon2Aspergillus niger KYF3exon
KYF_000788-T1.exon1KYF_000788-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteBUSCO:EOG092616QN
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR027516
DBxrefInterPro:IPR008905
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR000717
DBxrefPFAM:PF01399
ProductTranslation initiation factor 3 subunit c
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1976888..1979574 -
Powered by Drupal