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KYF_000837-T1, KYF_000837-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_000837-T1
Unique NameKYF_000837-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2106159..2107369-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_000837-T1 ID=KYF_000837-T1|Name=KYF_000837-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1211bp|location=Sequence derived from alignment at ch1:2106159..2107369- (Aspergillus niger KYF3)
ATGCCTCCTCCCCAGATCAAGCAGGACCTGAACCGGTCCGGATGGGAGAC CACTGACTTCCCCTCCGTGTGCGAGAACTGCCTGCCCGATAATCCTTATG TTCAGATGCTCAAGGAAGACCATGGCGCAGAATGCAAGATTGTAGGCAAC CCTATCCTCTATCACACAAACATATGACACTAACAGATACCCAGTGCACG CGTCCTTTCACCATCTTCCGCTGGAAAGCCGACCGCACCGCGCGCCAGAA GCGTACTGCCATCTGCTTGACCTGCGCGCGGTTGAAGAACTGCTGTCAAT GCTGTATGCTGGATCTGTCCTTCGGGCTGCCGATCGTCGTTCGTGATGCT GCTTTGAAGATGGTCGCTCCAGGTCCCGAAAGCACCATCAACCGCGAATA CTACGCACAAGGTCATGAGAAGGAGATCGAAGAGGGGCGTGGCGCGGTGG AGGAATACGAGAAGACGGACGAGAAAGCTCGGGAGCTGCTTCGGAGACTC GCCAACAGTGAACCCTACTACAGGAAGCCCCGCCAGATAGAGGCCGCACC CCAAGACGAGGAGGGCGCGAGTGCAGGGCCCAGCGACGCACCGGTTGTAC ACAGCCGTTACGGGAATGGTCCGGGGCCCATTCGGACGAGCGAAAGCAGG AGGGGAACGCCACTTCCGGGCAGAGGACGAGGAGGTATGCGTGGTGGTCG CGGTGGCCGGCCATTCCCTAGCGCCGCTCAGGTCCCCCCATCGGCAGAAG ATATCCTACCGCCCGCAGACCCGAATATCACATCGCTCTTTGTTACTGGT GTCGAGGACGATCTTCCAGAACACACGCTGCGGACTTTCTTCACACAGTT TGGACAGTTGCGGTCGCTCATTTGCTCCCACCGTGCTCACTCTGCATTCG TCAACTTCGCCACTCGGGAAGGTGCTGAGGCGGCTGCCAAGCAGTGCCAG GGTCGGGCTGTCATCCAGGGCTGCCCTCTGCGCGTTCGCTGGGGTAAGCC CAAGCCGTTGGATAATATGGATCGGGAGGAACGCTTGAAGAATGCGCGGG AAGGTCGGCAGGCGGCAGGCCCGGGGGGAGCCGATTCTGGAAAGAAGGCC ATCACAGCTGCCGGAGAGGAGATTGGCAAAGAGCAAAAACAACGGAGTTA TGCTGTCGCCCCACCCCCGGGCGCTGGAGAGGTCCAGTACTCCAGTTTGT CTGGTGATTGA
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Coding sequence (CDS) from alignment at ch1:2106159..2107369-

>KYF_000837-T1 ID=KYF_000837-T1|Name=KYF_000837-T1|organism=Aspergillus niger KYF3|type=CDS|length=2316bp|location=Sequence derived from alignment at ch1:2106159..2107369- (Aspergillus niger KYF3)
TGCACGCGTCCTTTCACCATCTTCCGCTGGAAAGCCGACCGCACCGCGCG
CCAGAAGCGTACTGCCATCTGCTTGACCTGCGCGCGGTTGAAGAACTGCT
GTCAATGCTGTATGCTGGATCTGTCCTTCGGGCTGCCGATCGTCGTTCGT
GATGCTGCTTTGAAGATGGTCGCTCCAGGTCCCGAAAGCACCATCAACCG
CGAATACTACGCACAAGGTCATGAGAAGGAGATCGAAGAGGGGCGTGGCG
CGGTGGAGGAATACGAGAAGACGGACGAGAAAGCTCGGGAGCTGCTTCGG
AGACTCGCCAACAGTGAACCCTACTACAGGAAGCCCCGCCAGATAGAGGC
CGCACCCCAAGACGAGGAGGGCGCGAGTGCAGGGCCCAGCGACGCACCGG
TTGTACACAGCCGTTACGGGAATGGTCCGGGGCCCATTCGGACGAGCGAA
AGCAGGAGGGGAACGCCACTTCCGGGCAGAGGACGAGGAGGTATGCGTGG
TGGTCGCGGTGGCCGGCCATTCCCTAGCGCCGCTCAGGTCCCCCCATCGG
CAGAAGATATCCTACCGCCCGCAGACCCGAATATCACATCGCTCTTTGTT
ACTGGTGTCGAGGACGATCTTCCAGAACACACGCTGCGGACTTTCTTCAC
ACAGTTTGGACAGTTGCGGTCGCTCATTTGCTCCCACCGTGCTCACTCTG
CATTCGTCAACTTCGCCACTCGGGAAGGTGCTGAGGCGGCTGCCAAGCAG
TGCCAGGGTCGGGCTGTCATCCAGGGCTGCCCTCTGCGCGTTCGCTGGGG
TAAGCCCAAGCCGTTGGATAATATGGATCGGGAGGAACGCTTGAAGAATG
CGCGGGAAGGTCGGCAGGCGGCAGGCCCGGGGGGAGCCGATTCTGGAAAG
AAGGCCATCACAGCTGCCGGAGAGGAGATTGGCAAAGAGCAAAAACAACG
GAGTTATGCTGTCGCCCCACCCCCGGGCGCTGGAGAGGTCCAGTACTCCA
GTTTGTCTGGTGATTGAATGCCTCCTCCCCAGATCAAGCAGGACCTGAAC
CGGTCCGGATGGGAGACCACTGACTTCCCCTCCGTGTGCGAGAACTGCCT
GCCCGATAATCCTTATGTTCAGATGCTCAAGGAAGACCATGGCGCAGAAT
GCAAGATTTGCACGCGTCCTTTCACCATCTTCCGCTGGAAAGCCGACCGC
ACCGCGCGCCAGAAGCGTACTGCCATCTGCTTGACCTGCGCGCGGTTGAA
GAACTGCTGTCAATGCTGTATGCTGGATCTGTCCTTCGGGCTGCCGATCG
TCGTTCGTGATGCTGCTTTGAAGATGGTCGCTCCAGGTCCCGAAAGCACC
ATCAACCGCGAATACTACGCACAAGGTCATGAGAAGGAGATCGAAGAGGG
GCGTGGCGCGGTGGAGGAATACGAGAAGACGGACGAGAAAGCTCGGGAGC
TGCTTCGGAGACTCGCCAACAGTGAACCCTACTACAGGAAGCCCCGCCAG
ATAGAGGCCGCACCCCAAGACGAGGAGGGCGCGAGTGCAGGGCCCAGCGA
CGCACCGGTTGTACACAGCCGTTACGGGAATGGTCCGGGGCCCATTCGGA
CGAGCGAAAGCAGGAGGGGAACGCCACTTCCGGGCAGAGGACGAGGAGGT
ATGCGTGGTGGTCGCGGTGGCCGGCCATTCCCTAGCGCCGCTCAGGTCCC
CCCATCGGCAGAAGATATCCTACCGCCCGCAGACCCGAATATCACATCGC
TCTTTGTTACTGGTGTCGAGGACGATCTTCCAGAACACACGCTGCGGACT
TTCTTCACACAGTTTGGACAGTTGCGGTCGCTCATTTGCTCCCACCGTGC
TCACTCTGCATTCGTCAACTTCGCCACTCGGGAAGGTGCTGAGGCGGCTG
CCAAGCAGTGCCAGGGTCGGGCTGTCATCCAGGGCTGCCCTCTGCGCGTT
CGCTGGGGTAAGCCCAAGCCGTTGGATAATATGGATCGGGAGGAACGCTT
GAAGAATGCGCGGGAAGGTCGGCAGGCGGCAGGCCCGGGGGGAGCCGATT
CTGGAAAGAAGGCCATCACAGCTGCCGGAGAGGAGATTGGCAAAGAGCAA
AAACAACGGAGTTATGCTGTCGCCCCACCCCCGGGCGCTGGAGAGGTCCA
GTACTCCAGTTTGTCTGGTGATTGAATGCCTCCTCCCCAGATCAAGCAGG
ACCTGAACCGGTCCGGATGGGAGACCACTGACTTCCCCTCCGTGTGCGAG
AACTGCCTGCCCGATAATCCTTATGTTCAGATGCTCAAGGAAGACCATGG
CGCAGAATGCAAGATT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SLT11KYF_000837Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_000837-T1KYF_000837-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000837-T1.cdsKYF_000837-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000837-T1.exon2KYF_000837-T1.exon2Aspergillus niger KYF3exon
KYF_000837-T1.exon1KYF_000837-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteBUSCO:EOG09263BDA
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034356
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
ProductPre-mRNA-splicing factor slt11
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2106159..2107369 -