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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2106159..2107369- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_000837-T1 ID=KYF_000837-T1|Name=KYF_000837-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1211bp|location=Sequence derived from alignment at ch1:2106159..2107369- (Aspergillus niger KYF3) ATGCCTCCTCCCCAGATCAAGCAGGACCTGAACCGGTCCGGATGGGAGAC
CACTGACTTCCCCTCCGTGTGCGAGAACTGCCTGCCCGATAATCCTTATG
TTCAGATGCTCAAGGAAGACCATGGCGCAGAATGCAAGATTGTAGGCAAC
CCTATCCTCTATCACACAAACATATGACACTAACAGATACCCAGTGCACG
CGTCCTTTCACCATCTTCCGCTGGAAAGCCGACCGCACCGCGCGCCAGAA
GCGTACTGCCATCTGCTTGACCTGCGCGCGGTTGAAGAACTGCTGTCAAT
GCTGTATGCTGGATCTGTCCTTCGGGCTGCCGATCGTCGTTCGTGATGCT
GCTTTGAAGATGGTCGCTCCAGGTCCCGAAAGCACCATCAACCGCGAATA
CTACGCACAAGGTCATGAGAAGGAGATCGAAGAGGGGCGTGGCGCGGTGG
AGGAATACGAGAAGACGGACGAGAAAGCTCGGGAGCTGCTTCGGAGACTC
GCCAACAGTGAACCCTACTACAGGAAGCCCCGCCAGATAGAGGCCGCACC
CCAAGACGAGGAGGGCGCGAGTGCAGGGCCCAGCGACGCACCGGTTGTAC
ACAGCCGTTACGGGAATGGTCCGGGGCCCATTCGGACGAGCGAAAGCAGG
AGGGGAACGCCACTTCCGGGCAGAGGACGAGGAGGTATGCGTGGTGGTCG
CGGTGGCCGGCCATTCCCTAGCGCCGCTCAGGTCCCCCCATCGGCAGAAG
ATATCCTACCGCCCGCAGACCCGAATATCACATCGCTCTTTGTTACTGGT
GTCGAGGACGATCTTCCAGAACACACGCTGCGGACTTTCTTCACACAGTT
TGGACAGTTGCGGTCGCTCATTTGCTCCCACCGTGCTCACTCTGCATTCG
TCAACTTCGCCACTCGGGAAGGTGCTGAGGCGGCTGCCAAGCAGTGCCAG
GGTCGGGCTGTCATCCAGGGCTGCCCTCTGCGCGTTCGCTGGGGTAAGCC
CAAGCCGTTGGATAATATGGATCGGGAGGAACGCTTGAAGAATGCGCGGG
AAGGTCGGCAGGCGGCAGGCCCGGGGGGAGCCGATTCTGGAAAGAAGGCC
ATCACAGCTGCCGGAGAGGAGATTGGCAAAGAGCAAAAACAACGGAGTTA
TGCTGTCGCCCCACCCCCGGGCGCTGGAGAGGTCCAGTACTCCAGTTTGT
CTGGTGATTGA back to topCoding sequence (CDS) from alignment at ch1:2106159..2107369- >KYF_000837-T1 ID=KYF_000837-T1|Name=KYF_000837-T1|organism=Aspergillus niger KYF3|type=CDS|length=2316bp|location=Sequence derived from alignment at ch1:2106159..2107369- (Aspergillus niger KYF3) TGCACGCGTCCTTTCACCATCTTCCGCTGGAAAGCCGACCGCACCGCGCG CCAGAAGCGTACTGCCATCTGCTTGACCTGCGCGCGGTTGAAGAACTGCT GTCAATGCTGTATGCTGGATCTGTCCTTCGGGCTGCCGATCGTCGTTCGT GATGCTGCTTTGAAGATGGTCGCTCCAGGTCCCGAAAGCACCATCAACCG CGAATACTACGCACAAGGTCATGAGAAGGAGATCGAAGAGGGGCGTGGCG CGGTGGAGGAATACGAGAAGACGGACGAGAAAGCTCGGGAGCTGCTTCGG AGACTCGCCAACAGTGAACCCTACTACAGGAAGCCCCGCCAGATAGAGGC CGCACCCCAAGACGAGGAGGGCGCGAGTGCAGGGCCCAGCGACGCACCGG TTGTACACAGCCGTTACGGGAATGGTCCGGGGCCCATTCGGACGAGCGAA AGCAGGAGGGGAACGCCACTTCCGGGCAGAGGACGAGGAGGTATGCGTGG TGGTCGCGGTGGCCGGCCATTCCCTAGCGCCGCTCAGGTCCCCCCATCGG CAGAAGATATCCTACCGCCCGCAGACCCGAATATCACATCGCTCTTTGTT ACTGGTGTCGAGGACGATCTTCCAGAACACACGCTGCGGACTTTCTTCAC ACAGTTTGGACAGTTGCGGTCGCTCATTTGCTCCCACCGTGCTCACTCTG CATTCGTCAACTTCGCCACTCGGGAAGGTGCTGAGGCGGCTGCCAAGCAG TGCCAGGGTCGGGCTGTCATCCAGGGCTGCCCTCTGCGCGTTCGCTGGGG TAAGCCCAAGCCGTTGGATAATATGGATCGGGAGGAACGCTTGAAGAATG CGCGGGAAGGTCGGCAGGCGGCAGGCCCGGGGGGAGCCGATTCTGGAAAG AAGGCCATCACAGCTGCCGGAGAGGAGATTGGCAAAGAGCAAAAACAACG GAGTTATGCTGTCGCCCCACCCCCGGGCGCTGGAGAGGTCCAGTACTCCA GTTTGTCTGGTGATTGAATGCCTCCTCCCCAGATCAAGCAGGACCTGAAC CGGTCCGGATGGGAGACCACTGACTTCCCCTCCGTGTGCGAGAACTGCCT GCCCGATAATCCTTATGTTCAGATGCTCAAGGAAGACCATGGCGCAGAAT GCAAGATTTGCACGCGTCCTTTCACCATCTTCCGCTGGAAAGCCGACCGC ACCGCGCGCCAGAAGCGTACTGCCATCTGCTTGACCTGCGCGCGGTTGAA GAACTGCTGTCAATGCTGTATGCTGGATCTGTCCTTCGGGCTGCCGATCG TCGTTCGTGATGCTGCTTTGAAGATGGTCGCTCCAGGTCCCGAAAGCACC ATCAACCGCGAATACTACGCACAAGGTCATGAGAAGGAGATCGAAGAGGG GCGTGGCGCGGTGGAGGAATACGAGAAGACGGACGAGAAAGCTCGGGAGC TGCTTCGGAGACTCGCCAACAGTGAACCCTACTACAGGAAGCCCCGCCAG ATAGAGGCCGCACCCCAAGACGAGGAGGGCGCGAGTGCAGGGCCCAGCGA CGCACCGGTTGTACACAGCCGTTACGGGAATGGTCCGGGGCCCATTCGGA CGAGCGAAAGCAGGAGGGGAACGCCACTTCCGGGCAGAGGACGAGGAGGT ATGCGTGGTGGTCGCGGTGGCCGGCCATTCCCTAGCGCCGCTCAGGTCCC CCCATCGGCAGAAGATATCCTACCGCCCGCAGACCCGAATATCACATCGC TCTTTGTTACTGGTGTCGAGGACGATCTTCCAGAACACACGCTGCGGACT TTCTTCACACAGTTTGGACAGTTGCGGTCGCTCATTTGCTCCCACCGTGC TCACTCTGCATTCGTCAACTTCGCCACTCGGGAAGGTGCTGAGGCGGCTG CCAAGCAGTGCCAGGGTCGGGCTGTCATCCAGGGCTGCCCTCTGCGCGTT CGCTGGGGTAAGCCCAAGCCGTTGGATAATATGGATCGGGAGGAACGCTT GAAGAATGCGCGGGAAGGTCGGCAGGCGGCAGGCCCGGGGGGAGCCGATT CTGGAAAGAAGGCCATCACAGCTGCCGGAGAGGAGATTGGCAAAGAGCAA AAACAACGGAGTTATGCTGTCGCCCCACCCCCGGGCGCTGGAGAGGTCCA GTACTCCAGTTTGTCTGGTGATTGAATGCCTCCTCCCCAGATCAAGCAGG ACCTGAACCGGTCCGGATGGGAGACCACTGACTTCCCCTCCGTGTGCGAG AACTGCCTGCCCGATAATCCTTATGTTCAGATGCTCAAGGAAGACCATGG CGCAGAATGCAAGATT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | BUSCO:EOG09263BDA |
DBxref | InterPro:IPR035979 |
DBxref | InterPro:IPR034356 |
DBxref | InterPro:IPR012677 |
DBxref | InterPro:IPR000504 |
DBxref | PFAM:PF00076 |
Product | Pre-mRNA-splicing factor slt11 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch1 | supercontig | ch1:2106159..2107369 - |
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