You are here

KYF_000883-T1, KYF_000883-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_000883-T1
Unique NameKYF_000883-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2252945..2253410+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_000883-T1 ID=KYF_000883-T1|Name=KYF_000883-T1|organism=Aspergillus niger KYF3|type=mRNA|length=466bp|location=Sequence derived from alignment at ch1:2252945..2253410+ (Aspergillus niger KYF3)
ATGCCTCAGGACCTCAAGGTACGAAAAGCAGCATCAATCCTGCTTCCGAT ACTGATGCTTATAGAACGCCCACTACTCCTATGACTACCTCCACGGGCTG AAGGAGAAGTACGAGAAGTCGGTAAGTGTTACTCAACGCCCAGGTCCGAT CACTTCTAATTATTCCCCTAGGCCCAGGACTTCTGCCGTGAGTATCTACA GAGATATGGGTCGACGGAATACTAACAGCAGCAGGCGGTATGACCTTTGA GGACGCCCTTGCCCATGTCAACTCCACCGGCCGCACAGATTTCACCAGGG AACAGTTGGAGGCCTTTGACACCAACCATGATGGCAGCATCAACTTTGCT GGTGAGTGTCTTAGACATATTATGAGACGTGCTGCTGACAGGAGATAGAA TACATGGAATTGATGCTCAACAACGACAAGGAGCTCGCGTTCCGTAATGC CAAGTTCATCGCATAG
back to top

Coding sequence (CDS) from alignment at ch1:2252945..2253410+

>KYF_000883-T1 ID=KYF_000883-T1|Name=KYF_000883-T1|organism=Aspergillus niger KYF3|type=CDS|length=1380bp|location=Sequence derived from alignment at ch1:2252945..2253410+ (Aspergillus niger KYF3)
ATGCCTCAGGACCTCAAGAACGCCCACTACTCCTATGACTACCTCCACGG
GCTGAAGGAGAAGTACGAGAAGTCGGCCCAGGACTTCTGCCGCGGTATGA
CCTTTGAGGACGCCCTTGCCCATGTCAACTCCACCGGCCGCACAGATTTC
ACCAGGGAACAGTTGGAGGCCTTTGACACCAACCATGATGGCAGCATCAA
CTTTGCTGAATACATGGAATTGATGCTCAACAACGACAAGGAGCTCGCGT
TCCGTAATGCCAAGTTCATCGCATAGATGCCTCAGGACCTCAAGAACGCC
CACTACTCCTATGACTACCTCCACGGGCTGAAGGAGAAGTACGAGAAGTC
GGCCCAGGACTTCTGCCGCGGTATGACCTTTGAGGACGCCCTTGCCCATG
TCAACTCCACCGGCCGCACAGATTTCACCAGGGAACAGTTGGAGGCCTTT
GACACCAACCATGATGGCAGCATCAACTTTGCTGAATACATGGAATTGAT
GCTCAACAACGACAAGGAGCTCGCGTTCCGTAATGCCAAGTTCATCGCAT
AGATGCCTCAGGACCTCAAGAACGCCCACTACTCCTATGACTACCTCCAC
GGGCTGAAGGAGAAGTACGAGAAGTCGGCCCAGGACTTCTGCCGCGGTAT
GACCTTTGAGGACGCCCTTGCCCATGTCAACTCCACCGGCCGCACAGATT
TCACCAGGGAACAGTTGGAGGCCTTTGACACCAACCATGATGGCAGCATC
AACTTTGCTGAATACATGGAATTGATGCTCAACAACGACAAGGAGCTCGC
GTTCCGTAATGCCAAGTTCATCGCATAGATGCCTCAGGACCTCAAGAACG
CCCACTACTCCTATGACTACCTCCACGGGCTGAAGGAGAAGTACGAGAAG
TCGGCCCAGGACTTCTGCCGCGGTATGACCTTTGAGGACGCCCTTGCCCA
TGTCAACTCCACCGGCCGCACAGATTTCACCAGGGAACAGTTGGAGGCCT
TTGACACCAACCATGATGGCAGCATCAACTTTGCTGAATACATGGAATTG
ATGCTCAACAACGACAAGGAGCTCGCGTTCCGTAATGCCAAGTTCATCGC
ATAGATGCCTCAGGACCTCAAGAACGCCCACTACTCCTATGACTACCTCC
ACGGGCTGAAGGAGAAGTACGAGAAGTCGGCCCAGGACTTCTGCCGCGGT
ATGACCTTTGAGGACGCCCTTGCCCATGTCAACTCCACCGGCCGCACAGA
TTTCACCAGGGAACAGTTGGAGGCCTTTGACACCAACCATGATGGCAGCA
TCAACTTTGCTGAATACATGGAATTGATGCTCAACAACGACAAGGAGCTC
GCGTTCCGTAATGCCAAGTTCATCGCATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_000883KYF_000883Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_000883-T1KYF_000883-T1-proteinAspergillus niger KYF3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000883-T1.exon1KYF_000883-T1.exon1Aspergillus niger KYF3exon
KYF_000883-T1.exon2KYF_000883-T1.exon2Aspergillus niger KYF3exon
KYF_000883-T1.exon3KYF_000883-T1.exon3Aspergillus niger KYF3exon
KYF_000883-T1.exon4KYF_000883-T1.exon4Aspergillus niger KYF3exon
KYF_000883-T1.exon5KYF_000883-T1.exon5Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000883-T1.cdsKYF_000883-T1.cdsAspergillus niger KYF3CDS


Properties
Property NameValue
DBxrefInterPro:IPR011992
DBxrefInterPro:IPR002048
DBxrefInterPro:IPR018247
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2252945..2253410 +