|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2299986..2301003- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_000901-T1 ID=KYF_000901-T1|Name=KYF_000901-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1018bp|location=Sequence derived from alignment at ch1:2299986..2301003- (Aspergillus niger KYF3)
ATGCGATTGACCGTTGAACTGATCCAAAATTCCCTGTCCTACATTAACCC
GCTCAAAGACCGCGAGCTAGATCTTCGAGGTGCGTTCCAGCCACCAGTCC
TGAAAAGAACAGATACTACACTTTTGAGATGAGCTTGATTGATATCGGTT
TTGTGTTTGAGTCGTATAGGGCACAAGATACCCGCTATTGAGAACTTGGG
TATTGCCAAGGTAACCTCTTCCCACCACCTCATTTCTCTCTTGGAATGTC
TTCGCGGCATTGTATATGGTATAGAGGCTAAGAAAGGAACGGTAGGACCA
AGATGCAATCGACCTAACAGACAACGATATCACCTCCCTCGGAAACTTTC
CCTTCTTTCCTCGCCTCCGCACCCTCCTCCTCGCGCGTAACCGAGTCAAG
CAGATCCAGCCGACGATATCGACCTCGGTGCCGAATCTGAGCGCGCTGGT
GTTGACGGCGAATAACATGAACGAGTTGGCGGATTTGGACCCGCTTAGAA
ATCTGGCCCAGTTGACGCATTTGGTGTTGCTGGAGAATCCTGTTACCAGG
AAGGAGGTAAGCTTCCCCTTTTCTTCTATTTCCTTTCCTAGCGAGATCAA
AGCAAAGCAAAGTCTAACATAAATGGTATTGGTGTAGCACTATCGCTACT
ACGTCATCTGGCGCATCCCCAGCGTCCGCTTCCTCGACTACCAGAAAGTG
AAGGACGCGGAGCGCGAAAAAGCCACCGAGTTGTTCGGCACAGCTGAGGA
GCCGTCTGCGCTGGCGTCTAAGATCATGGGAATCAAGTCTCGCACGTTTG
ATGTGCCCTCGGGCGCAGGGGGTGCGGATCGTGGTGCGCCCGCGGATAAG
GCGGTGCGGGTGAAGTTGACGGAGAAGGAGAGGAAGAGGGTGGAGAAGAT
GATTCGCGAGGCGAAGAGTTTGCAGGAGATTTCGCGGTTGGAGAAGGAGT
TGAATGAGGGGAGGATACCTGGAGGTGCATTGGATTATGCTGATAGTGAT
GAGGAGATGCAGACATAG back to topCoding sequence (CDS) from alignment at ch1:2299986..2301003- >KYF_000901-T1 ID=KYF_000901-T1|Name=KYF_000901-T1|organism=Aspergillus niger KYF3|type=CDS|length=3048bp|location=Sequence derived from alignment at ch1:2299986..2301003- (Aspergillus niger KYF3)
CACTATCGCTACTACGTCATCTGGCGCATCCCCAGCGTCCGCTTCCTCGA
CTACCAGAAAGTGAAGGACGCGGAGCGCGAAAAAGCCACCGAGTTGTTCG
GCACAGCTGAGGAGCCGTCTGCGCTGGCGTCTAAGATCATGGGAATCAAG
TCTCGCACGTTTGATGTGCCCTCGGGCGCAGGGGGTGCGGATCGTGGTGC
GCCCGCGGATAAGGCGGTGCGGGTGAAGTTGACGGAGAAGGAGAGGAAGA
GGGTGGAGAAGATGATTCGCGAGGCGAAGAGTTTGCAGGAGATTTCGCGG
TTGGAGAAGGAGTTGAATGAGGGGAGGATACCTGGAGGTGCATTGGATTA
TGCTGATAGTGATGAGGAGATGCAGACATAGGACCAAGATGCAATCGACC
TAACAGACAACGATATCACCTCCCTCGGAAACTTTCCCTTCTTTCCTCGC
CTCCGCACCCTCCTCCTCGCGCGTAACCGAGTCAAGCAGATCCAGCCGAC
GATATCGACCTCGGTGCCGAATCTGAGCGCGCTGGTGTTGACGGCGAATA
ACATGAACGAGTTGGCGGATTTGGACCCGCTTAGAAATCTGGCCCAGTTG
ACGCATTTGGTGTTGCTGGAGAATCCTGTTACCAGGAAGGAGGGCACAAG
ATACCCGCTATTGAGAACTTGGGTATTGCCAAGATGCGATTGACCGTTGA
ACTGATCCAAAATTCCCTGTCCTACATTAACCCGCTCAAAGACCGCGAGC
TAGATCTTCGAGCACTATCGCTACTACGTCATCTGGCGCATCCCCAGCGT
CCGCTTCCTCGACTACCAGAAAGTGAAGGACGCGGAGCGCGAAAAAGCCA
CCGAGTTGTTCGGCACAGCTGAGGAGCCGTCTGCGCTGGCGTCTAAGATC
ATGGGAATCAAGTCTCGCACGTTTGATGTGCCCTCGGGCGCAGGGGGTGC
GGATCGTGGTGCGCCCGCGGATAAGGCGGTGCGGGTGAAGTTGACGGAGA
AGGAGAGGAAGAGGGTGGAGAAGATGATTCGCGAGGCGAAGAGTTTGCAG
GAGATTTCGCGGTTGGAGAAGGAGTTGAATGAGGGGAGGATACCTGGAGG
TGCATTGGATTATGCTGATAGTGATGAGGAGATGCAGACATAGGACCAAG
ATGCAATCGACCTAACAGACAACGATATCACCTCCCTCGGAAACTTTCCC
TTCTTTCCTCGCCTCCGCACCCTCCTCCTCGCGCGTAACCGAGTCAAGCA
GATCCAGCCGACGATATCGACCTCGGTGCCGAATCTGAGCGCGCTGGTGT
TGACGGCGAATAACATGAACGAGTTGGCGGATTTGGACCCGCTTAGAAAT
CTGGCCCAGTTGACGCATTTGGTGTTGCTGGAGAATCCTGTTACCAGGAA
GGAGGGCACAAGATACCCGCTATTGAGAACTTGGGTATTGCCAAGATGCG
ATTGACCGTTGAACTGATCCAAAATTCCCTGTCCTACATTAACCCGCTCA
AAGACCGCGAGCTAGATCTTCGAGCACTATCGCTACTACGTCATCTGGCG
CATCCCCAGCGTCCGCTTCCTCGACTACCAGAAAGTGAAGGACGCGGAGC
GCGAAAAAGCCACCGAGTTGTTCGGCACAGCTGAGGAGCCGTCTGCGCTG
GCGTCTAAGATCATGGGAATCAAGTCTCGCACGTTTGATGTGCCCTCGGG
CGCAGGGGGTGCGGATCGTGGTGCGCCCGCGGATAAGGCGGTGCGGGTGA
AGTTGACGGAGAAGGAGAGGAAGAGGGTGGAGAAGATGATTCGCGAGGCG
AAGAGTTTGCAGGAGATTTCGCGGTTGGAGAAGGAGTTGAATGAGGGGAG
GATACCTGGAGGTGCATTGGATTATGCTGATAGTGATGAGGAGATGCAGA
CATAGGACCAAGATGCAATCGACCTAACAGACAACGATATCACCTCCCTC
GGAAACTTTCCCTTCTTTCCTCGCCTCCGCACCCTCCTCCTCGCGCGTAA
CCGAGTCAAGCAGATCCAGCCGACGATATCGACCTCGGTGCCGAATCTGA
GCGCGCTGGTGTTGACGGCGAATAACATGAACGAGTTGGCGGATTTGGAC
CCGCTTAGAAATCTGGCCCAGTTGACGCATTTGGTGTTGCTGGAGAATCC
TGTTACCAGGAAGGAGGGCACAAGATACCCGCTATTGAGAACTTGGGTAT
TGCCAAGATGCGATTGACCGTTGAACTGATCCAAAATTCCCTGTCCTACA
TTAACCCGCTCAAAGACCGCGAGCTAGATCTTCGAGCACTATCGCTACTA
CGTCATCTGGCGCATCCCCAGCGTCCGCTTCCTCGACTACCAGAAAGTGA
AGGACGCGGAGCGCGAAAAAGCCACCGAGTTGTTCGGCACAGCTGAGGAG
CCGTCTGCGCTGGCGTCTAAGATCATGGGAATCAAGTCTCGCACGTTTGA
TGTGCCCTCGGGCGCAGGGGGTGCGGATCGTGGTGCGCCCGCGGATAAGG
CGGTGCGGGTGAAGTTGACGGAGAAGGAGAGGAAGAGGGTGGAGAAGATG
ATTCGCGAGGCGAAGAGTTTGCAGGAGATTTCGCGGTTGGAGAAGGAGTT
GAATGAGGGGAGGATACCTGGAGGTGCATTGGATTATGCTGATAGTGATG
AGGAGATGCAGACATAGGACCAAGATGCAATCGACCTAACAGACAACGAT
ATCACCTCCCTCGGAAACTTTCCCTTCTTTCCTCGCCTCCGCACCCTCCT
CCTCGCGCGTAACCGAGTCAAGCAGATCCAGCCGACGATATCGACCTCGG
TGCCGAATCTGAGCGCGCTGGTGTTGACGGCGAATAACATGAACGAGTTG
GCGGATTTGGACCCGCTTAGAAATCTGGCCCAGTTGACGCATTTGGTGTT
GCTGGAGAATCCTGTTACCAGGAAGGAGGGCACAAGATACCCGCTATTGA
GAACTTGGGTATTGCCAAGATGCGATTGACCGTTGAACTGATCCAAAATT
CCCTGTCCTACATTAACCCGCTCAAAGACCGCGAGCTAGATCTTCGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032675 |
| DBxref | PFAM:PF14580 |
| DBxref | PFAM:PF13855 |
| Product | U2 snRNP complex subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2299986..2301003 - |
|
