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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2389924..2390759- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_000929-T1 ID=KYF_000929-T1|Name=KYF_000929-T1|organism=Aspergillus niger KYF3|type=mRNA|length=836bp|location=Sequence derived from alignment at ch1:2389924..2390759- (Aspergillus niger KYF3)
ATGAAGCTCCCCGTGTCACTTGCTATGCTTGCGGCCACCGCCATGGGCCA
GACGATGTGCTCTCAATATGACAGTGCCTCGAGCCCCCCGTATTCAGTGA
ACCAGAACCTCTGGGGCGAGTACCAAGGCACCGGCAGCCAGTGTGTATAT
GTCGACAAACTCTCCAGCAGTGGTGCATCCTGGCACACCGAATGGACCTG
GAGCGGTGGTGAGGGAACAGTGAAAAGCTACTCTAACTCTGGCGTTACAT
TTAACAAGAAGCTCGTGAGTGATGTATCAAGCATCCCCACCTCGGTGGAA
TGGAAGCAGGACAACACCAACGTCAACGCCGATGTCGCGTATGATCTTTT
CACCGCGGCGAATGTGGACCATGCCACTTCTAGCGGCGACTATGAACTGA
TGATTTGGTATGTGAGCTCTCAAAGGATCAAAGAATACAGAAATCTAACA
ACGCCAGGCTTGCCCGCTACGGCAACATCCAGCCCATTGGCAAGCAAATT
GCCACGGCCACAGTGGGAGGCAAGTCCTGGGAGGTGTGGTATGGCAGCAC
CACCCAGGCCGGTGCGGAGCAGAGGACATACAGCTTCGTGTCAGAAAGCC
CTATCAACTCATACAGTGGGGACATCAATGCATTTTTCAGCTATCTCACT
CAGAACCAAGGCTTTCCCGCCAGCTCTCAGTACTTGATCAGTAAGATTCC
CTGATTCTACCAGCGGACGCCGCAGCGAAACAGTCACTAACAGAAGTGAT
GTGTAGATCTGCAGTTTGGAACTGAGGCGTTCACCGGGGGCCCGGCAACC
TTCACGGTTGACAACTGGACCGCCAGTGTCAACTAG back to topCoding sequence (CDS) from alignment at ch1:2389924..2390759- >KYF_000929-T1 ID=KYF_000929-T1|Name=KYF_000929-T1|organism=Aspergillus niger KYF3|type=CDS|length=2160bp|location=Sequence derived from alignment at ch1:2389924..2390759- (Aspergillus niger KYF3)
ATCTGCAGTTTGGAACTGAGGCGTTCACCGGGGGCCCGGCAACCTTCACG
GTTGACAACTGGACCGCCAGTGTCAACTAGGCTTGCCCGCTACGGCAACA
TCCAGCCCATTGGCAAGCAAATTGCCACGGCCACAGTGGGAGGCAAGTCC
TGGGAGGTGTGGTATGGCAGCACCACCCAGGCCGGTGCGGAGCAGAGGAC
ATACAGCTTCGTGTCAGAAAGCCCTATCAACTCATACAGTGGGGACATCA
ATGCATTTTTCAGCTATCTCACTCAGAACCAAGGCTTTCCCGCCAGCTCT
CAGTACTTGATCAATGAAGCTCCCCGTGTCACTTGCTATGCTTGCGGCCA
CCGCCATGGGCCAGACGATGTGCTCTCAATATGACAGTGCCTCGAGCCCC
CCGTATTCAGTGAACCAGAACCTCTGGGGCGAGTACCAAGGCACCGGCAG
CCAGTGTGTATATGTCGACAAACTCTCCAGCAGTGGTGCATCCTGGCACA
CCGAATGGACCTGGAGCGGTGGTGAGGGAACAGTGAAAAGCTACTCTAAC
TCTGGCGTTACATTTAACAAGAAGCTCGTGAGTGATGTATCAAGCATCCC
CACCTCGGTGGAATGGAAGCAGGACAACACCAACGTCAACGCCGATGTCG
CGTATGATCTTTTCACCGCGGCGAATGTGGACCATGCCACTTCTAGCGGC
GACTATGAACTGATGATTTGATCTGCAGTTTGGAACTGAGGCGTTCACCG
GGGGCCCGGCAACCTTCACGGTTGACAACTGGACCGCCAGTGTCAACTAG
GCTTGCCCGCTACGGCAACATCCAGCCCATTGGCAAGCAAATTGCCACGG
CCACAGTGGGAGGCAAGTCCTGGGAGGTGTGGTATGGCAGCACCACCCAG
GCCGGTGCGGAGCAGAGGACATACAGCTTCGTGTCAGAAAGCCCTATCAA
CTCATACAGTGGGGACATCAATGCATTTTTCAGCTATCTCACTCAGAACC
AAGGCTTTCCCGCCAGCTCTCAGTACTTGATCAATGAAGCTCCCCGTGTC
ACTTGCTATGCTTGCGGCCACCGCCATGGGCCAGACGATGTGCTCTCAAT
ATGACAGTGCCTCGAGCCCCCCGTATTCAGTGAACCAGAACCTCTGGGGC
GAGTACCAAGGCACCGGCAGCCAGTGTGTATATGTCGACAAACTCTCCAG
CAGTGGTGCATCCTGGCACACCGAATGGACCTGGAGCGGTGGTGAGGGAA
CAGTGAAAAGCTACTCTAACTCTGGCGTTACATTTAACAAGAAGCTCGTG
AGTGATGTATCAAGCATCCCCACCTCGGTGGAATGGAAGCAGGACAACAC
CAACGTCAACGCCGATGTCGCGTATGATCTTTTCACCGCGGCGAATGTGG
ACCATGCCACTTCTAGCGGCGACTATGAACTGATGATTTGATCTGCAGTT
TGGAACTGAGGCGTTCACCGGGGGCCCGGCAACCTTCACGGTTGACAACT
GGACCGCCAGTGTCAACTAGGCTTGCCCGCTACGGCAACATCCAGCCCAT
TGGCAAGCAAATTGCCACGGCCACAGTGGGAGGCAAGTCCTGGGAGGTGT
GGTATGGCAGCACCACCCAGGCCGGTGCGGAGCAGAGGACATACAGCTTC
GTGTCAGAAAGCCCTATCAACTCATACAGTGGGGACATCAATGCATTTTT
CAGCTATCTCACTCAGAACCAAGGCTTTCCCGCCAGCTCTCAGTACTTGA
TCAATGAAGCTCCCCGTGTCACTTGCTATGCTTGCGGCCACCGCCATGGG
CCAGACGATGTGCTCTCAATATGACAGTGCCTCGAGCCCCCCGTATTCAG
TGAACCAGAACCTCTGGGGCGAGTACCAAGGCACCGGCAGCCAGTGTGTA
TATGTCGACAAACTCTCCAGCAGTGGTGCATCCTGGCACACCGAATGGAC
CTGGAGCGGTGGTGAGGGAACAGTGAAAAGCTACTCTAACTCTGGCGTTA
CATTTAACAAGAAGCTCGTGAGTGATGTATCAAGCATCCCCACCTCGGTG
GAATGGAAGCAGGACAACACCAACGTCAACGCCGATGTCGCGTATGATCT
TTTCACCGCGGCGAATGTGGACCATGCCACTTCTAGCGGCGACTATGAAC
TGATGATTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000272 | polysaccharide catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008810 | cellulase activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-16) |
| DBxref | InterPro:IPR013320 |
| DBxref | InterPro:IPR002594 |
| DBxref | InterPro:IPR013319 |
| DBxref | PFAM:PF01670 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2389924..2390759 - |
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