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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2744851..2746799- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_001059-T1 ID=KYF_001059-T1|Name=KYF_001059-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1949bp|location=Sequence derived from alignment at ch1:2744851..2746799- (Aspergillus niger KYF3)
ATGCTTCTCGACAAGCTCTCTGTTCTCTCTTTCCTGGGCCTGGCGCCCAT
CTTTGCTGCTGCGCAGCTCTCCGGTTCCGTGGGACCGCTGACTTCCGCGT
CCACCAAGGCAGCTACCAAGACTTGCAACGTTTTGGACTACGGTGCTAAG
GCGGATAAGTCTACTGATCTGGGCGCGCCGTTGGCATCTGCCTTCGCTGA
CTGCAAGTCTGGCGGTCTCGTCTATGTCCCCTCTGGTGACTATGCTCTCT
CCACATGGGCGAGGTTGAGCGGTGGTGAGGCATGGGCTCTGCAGATCGAT
GGAATCATCTACCGTACTGGCACGGACGGCGGCAACATGATCTATATCGA
ACACTCTAGCGACTTCGAACTTTTCAGTAGCACCTCCGAAGGTGCCATGC
AGGGCCTGGGCTACGAGTTCCATGCCGATGATAACTGGAGCGGCCCTCGT
CTGCTGCGACTCTATGAAGTGACGGACTTCTCGGTCCACGATTTCATCCT
GGTTGACTCTCCATCTTTCCACTTCTCTCTCGACACTTGCACCAATGGCG
AAATCTACAACATGGCAATCCGCGGCGGTAACCATGGTGGTCTGGATGGT
ATTGATGTCTGGAGTAACAACATCTGGGTCCATGATGTGAGTACCGAAGA
GCAGAATGTTTCCTGTATACAGGTTATTGATTGGTCCGATAGGTCGAGGT
GACGAACAAGGACGAGTGTGTCACAGTCAAGGTATGACCATGATGAGTGC
GCCAGCAGGAAGCATCAGGCTAACAATCAATAATAGAGCCCATCGAAGAA
CATCCTCATTGAGAGCATCTACTGCAACTGGAGTGGTGGATGTGGTATGG
GCTCGTTTGGCTCTGATACCAATGTCAGCGACATCACTTACCGCAACATC
TACACCTGGAGCTCGAACAACATGATGTTGATCAAGAGCAATGGAGGTAG
CGGCTTCATCGAGAATGTTCTCCTCGAGAACTTCATCGGTGAGTAATATC
TTATGCAAACCCATTGGTCTTGATGGGACTAACCAAGGACTCTTTCTGTT
CGTAAACAGGACACGGCAACGCTTACTCTCTGGATATTGACAGCTACTGG
GCCAGTATGAGCGCGGTGGACGGCGATGGTGTCCAGCTGAGCAACATCAC
CGTGAAGAACTGGAAGGGAACCGAAGCTTACGGTGCTGAGCGTGGTCCTG
TCAAGGTGATCTGTGCTGATGGTGCCCCTTGCTACGACATTACCATTGAG
GACTTCGCCATGTGGACCGAGGAGGGTGATACTCAGTGGTACTCTTGTGA
GAGTGCTTATGGCAGCGGATTCTGCCTTCAGGACAGCGACGACCACGTCT
CTTACTCGGCCACCACTTCTACGGTCAGCTCCGCTCCCTCGGGCTACTCT
GCGACCTCCATGGCCGCCGATCTGACCACTGACTTCGGCTCTACTGTCTC
TATCCCCATCCCGACCATCCCTACCTCTTTCTACCCGGGTGCCACCCCCT
ACAGTGCTCTGATGGCCAACAGCGCTTCTACTGCCGCTGCTTCTTCCATT
GCCAGCCATGCCACTGTCCATAGCAGCAGCGCTTCCGTTGCTGCTTCTGT
GCCCAGCGCTGTCGCCCCTAGCGAGAGCATCCCCGCCGCCACTTCCGCCG
TGGTATCCAGCGCTGCTGCCATTGCCCCCAGCCCCGCTGTGGGTGCCCAG
GAGGGGTCTACCACCTCCGCTCCCAGCTTTGCTGCCCCCAGTGGTGCTGG
AAACTCTCCCCAGGGTCCCACCGGAGCTTCTGGATTCGGCGAGAAGGGCC
AGCAGGGTGAGCAGGGTGAGCAGGGTGAGCAGGGTGAGCAGGGTGAGCAG
GGTGAACAGGGCGAACAGGGCGAACAGGGCGAACAGGGCGAACAGGGCGA
ACAGGGCGAACAGGGCGAACAGGGCGAGCAGGGTGTCTGCTACGTGTAA back to topCoding sequence (CDS) from alignment at ch1:2744851..2746799- >KYF_001059-T1 ID=KYF_001059-T1|Name=KYF_001059-T1|organism=Aspergillus niger KYF3|type=CDS|length=7068bp|location=Sequence derived from alignment at ch1:2744851..2746799- (Aspergillus niger KYF3)
GACACGGCAACGCTTACTCTCTGGATATTGACAGCTACTGGGCCAGTATG
AGCGCGGTGGACGGCGATGGTGTCCAGCTGAGCAACATCACCGTGAAGAA
CTGGAAGGGAACCGAAGCTTACGGTGCTGAGCGTGGTCCTGTCAAGGTGA
TCTGTGCTGATGGTGCCCCTTGCTACGACATTACCATTGAGGACTTCGCC
ATGTGGACCGAGGAGGGTGATACTCAGTGGTACTCTTGTGAGAGTGCTTA
TGGCAGCGGATTCTGCCTTCAGGACAGCGACGACCACGTCTCTTACTCGG
CCACCACTTCTACGGTCAGCTCCGCTCCCTCGGGCTACTCTGCGACCTCC
ATGGCCGCCGATCTGACCACTGACTTCGGCTCTACTGTCTCTATCCCCAT
CCCGACCATCCCTACCTCTTTCTACCCGGGTGCCACCCCCTACAGTGCTC
TGATGGCCAACAGCGCTTCTACTGCCGCTGCTTCTTCCATTGCCAGCCAT
GCCACTGTCCATAGCAGCAGCGCTTCCGTTGCTGCTTCTGTGCCCAGCGC
TGTCGCCCCTAGCGAGAGCATCCCCGCCGCCACTTCCGCCGTGGTATCCA
GCGCTGCTGCCATTGCCCCCAGCCCCGCTGTGGGTGCCCAGGAGGGGTCT
ACCACCTCCGCTCCCAGCTTTGCTGCCCCCAGTGGTGCTGGAAACTCTCC
CCAGGGTCCCACCGGAGCTTCTGGATTCGGCGAGAAGGGCCAGCAGGGTG
AGCAGGGTGAGCAGGGTGAGCAGGGTGAGCAGGGTGAGCAGGGTGAACAG
GGCGAACAGGGCGAACAGGGCGAACAGGGCGAACAGGGCGAACAGGGCGA
ACAGGGCGAACAGGGCGAGCAGGGTGTCTGCTACGTGTAAAGCCCATCGA
AGAACATCCTCATTGAGAGCATCTACTGCAACTGGAGTGGTGGATGTGGT
ATGGGCTCGTTTGGCTCTGATACCAATGTCAGCGACATCACTTACCGCAA
CATCTACACCTGGAGCTCGAACAACATGATGTTGATCAAGAGCAATGGAG
GTAGCGGCTTCATCGAGAATGTTCTCCTCGAGAACTTCATCGGTCGAGGT
GACGAACAAGGACGAGTGTGTCACAGTCAAGATGCTTCTCGACAAGCTCT
CTGTTCTCTCTTTCCTGGGCCTGGCGCCCATCTTTGCTGCTGCGCAGCTC
TCCGGTTCCGTGGGACCGCTGACTTCCGCGTCCACCAAGGCAGCTACCAA
GACTTGCAACGTTTTGGACTACGGTGCTAAGGCGGATAAGTCTACTGATC
TGGGCGCGCCGTTGGCATCTGCCTTCGCTGACTGCAAGTCTGGCGGTCTC
GTCTATGTCCCCTCTGGTGACTATGCTCTCTCCACATGGGCGAGGTTGAG
CGGTGGTGAGGCATGGGCTCTGCAGATCGATGGAATCATCTACCGTACTG
GCACGGACGGCGGCAACATGATCTATATCGAACACTCTAGCGACTTCGAA
CTTTTCAGTAGCACCTCCGAAGGTGCCATGCAGGGCCTGGGCTACGAGTT
CCATGCCGATGATAACTGGAGCGGCCCTCGTCTGCTGCGACTCTATGAAG
TGACGGACTTCTCGGTCCACGATTTCATCCTGGTTGACTCTCCATCTTTC
CACTTCTCTCTCGACACTTGCACCAATGGCGAAATCTACAACATGGCAAT
CCGCGGCGGTAACCATGGTGGTCTGGATGGTATTGATGTCTGGAGTAACA
ACATCTGGGTCCATGATGACACGGCAACGCTTACTCTCTGGATATTGACA
GCTACTGGGCCAGTATGAGCGCGGTGGACGGCGATGGTGTCCAGCTGAGC
AACATCACCGTGAAGAACTGGAAGGGAACCGAAGCTTACGGTGCTGAGCG
TGGTCCTGTCAAGGTGATCTGTGCTGATGGTGCCCCTTGCTACGACATTA
CCATTGAGGACTTCGCCATGTGGACCGAGGAGGGTGATACTCAGTGGTAC
TCTTGTGAGAGTGCTTATGGCAGCGGATTCTGCCTTCAGGACAGCGACGA
CCACGTCTCTTACTCGGCCACCACTTCTACGGTCAGCTCCGCTCCCTCGG
GCTACTCTGCGACCTCCATGGCCGCCGATCTGACCACTGACTTCGGCTCT
ACTGTCTCTATCCCCATCCCGACCATCCCTACCTCTTTCTACCCGGGTGC
CACCCCCTACAGTGCTCTGATGGCCAACAGCGCTTCTACTGCCGCTGCTT
CTTCCATTGCCAGCCATGCCACTGTCCATAGCAGCAGCGCTTCCGTTGCT
GCTTCTGTGCCCAGCGCTGTCGCCCCTAGCGAGAGCATCCCCGCCGCCAC
TTCCGCCGTGGTATCCAGCGCTGCTGCCATTGCCCCCAGCCCCGCTGTGG
GTGCCCAGGAGGGGTCTACCACCTCCGCTCCCAGCTTTGCTGCCCCCAGT
GGTGCTGGAAACTCTCCCCAGGGTCCCACCGGAGCTTCTGGATTCGGCGA
GAAGGGCCAGCAGGGTGAGCAGGGTGAGCAGGGTGAGCAGGGTGAGCAGG
GTGAGCAGGGTGAACAGGGCGAACAGGGCGAACAGGGCGAACAGGGCGAA
CAGGGCGAACAGGGCGAACAGGGCGAACAGGGCGAGCAGGGTGTCTGCTA
CGTGTAAAGCCCATCGAAGAACATCCTCATTGAGAGCATCTACTGCAACT
GGAGTGGTGGATGTGGTATGGGCTCGTTTGGCTCTGATACCAATGTCAGC
GACATCACTTACCGCAACATCTACACCTGGAGCTCGAACAACATGATGTT
GATCAAGAGCAATGGAGGTAGCGGCTTCATCGAGAATGTTCTCCTCGAGA
ACTTCATCGGTCGAGGTGACGAACAAGGACGAGTGTGTCACAGTCAAGAT
GCTTCTCGACAAGCTCTCTGTTCTCTCTTTCCTGGGCCTGGCGCCCATCT
TTGCTGCTGCGCAGCTCTCCGGTTCCGTGGGACCGCTGACTTCCGCGTCC
ACCAAGGCAGCTACCAAGACTTGCAACGTTTTGGACTACGGTGCTAAGGC
GGATAAGTCTACTGATCTGGGCGCGCCGTTGGCATCTGCCTTCGCTGACT
GCAAGTCTGGCGGTCTCGTCTATGTCCCCTCTGGTGACTATGCTCTCTCC
ACATGGGCGAGGTTGAGCGGTGGTGAGGCATGGGCTCTGCAGATCGATGG
AATCATCTACCGTACTGGCACGGACGGCGGCAACATGATCTATATCGAAC
ACTCTAGCGACTTCGAACTTTTCAGTAGCACCTCCGAAGGTGCCATGCAG
GGCCTGGGCTACGAGTTCCATGCCGATGATAACTGGAGCGGCCCTCGTCT
GCTGCGACTCTATGAAGTGACGGACTTCTCGGTCCACGATTTCATCCTGG
TTGACTCTCCATCTTTCCACTTCTCTCTCGACACTTGCACCAATGGCGAA
ATCTACAACATGGCAATCCGCGGCGGTAACCATGGTGGTCTGGATGGTAT
TGATGTCTGGAGTAACAACATCTGGGTCCATGATGACACGGCAACGCTTA
CTCTCTGGATATTGACAGCTACTGGGCCAGTATGAGCGCGGTGGACGGCG
ATGGTGTCCAGCTGAGCAACATCACCGTGAAGAACTGGAAGGGAACCGAA
GCTTACGGTGCTGAGCGTGGTCCTGTCAAGGTGATCTGTGCTGATGGTGC
CCCTTGCTACGACATTACCATTGAGGACTTCGCCATGTGGACCGAGGAGG
GTGATACTCAGTGGTACTCTTGTGAGAGTGCTTATGGCAGCGGATTCTGC
CTTCAGGACAGCGACGACCACGTCTCTTACTCGGCCACCACTTCTACGGT
CAGCTCCGCTCCCTCGGGCTACTCTGCGACCTCCATGGCCGCCGATCTGA
CCACTGACTTCGGCTCTACTGTCTCTATCCCCATCCCGACCATCCCTACC
TCTTTCTACCCGGGTGCCACCCCCTACAGTGCTCTGATGGCCAACAGCGC
TTCTACTGCCGCTGCTTCTTCCATTGCCAGCCATGCCACTGTCCATAGCA
GCAGCGCTTCCGTTGCTGCTTCTGTGCCCAGCGCTGTCGCCCCTAGCGAG
AGCATCCCCGCCGCCACTTCCGCCGTGGTATCCAGCGCTGCTGCCATTGC
CCCCAGCCCCGCTGTGGGTGCCCAGGAGGGGTCTACCACCTCCGCTCCCA
GCTTTGCTGCCCCCAGTGGTGCTGGAAACTCTCCCCAGGGTCCCACCGGA
GCTTCTGGATTCGGCGAGAAGGGCCAGCAGGGTGAGCAGGGTGAGCAGGG
TGAGCAGGGTGAGCAGGGTGAGCAGGGTGAACAGGGCGAACAGGGCGAAC
AGGGCGAACAGGGCGAACAGGGCGAACAGGGCGAACAGGGCGAACAGGGC
GAGCAGGGTGTCTGCTACGTGTAAAGCCCATCGAAGAACATCCTCATTGA
GAGCATCTACTGCAACTGGAGTGGTGGATGTGGTATGGGCTCGTTTGGCT
CTGATACCAATGTCAGCGACATCACTTACCGCAACATCTACACCTGGAGC
TCGAACAACATGATGTTGATCAAGAGCAATGGAGGTAGCGGCTTCATCGA
GAATGTTCTCCTCGAGAACTTCATCGGTCGAGGTGACGAACAAGGACGAG
TGTGTCACAGTCAAGATGCTTCTCGACAAGCTCTCTGTTCTCTCTTTCCT
GGGCCTGGCGCCCATCTTTGCTGCTGCGCAGCTCTCCGGTTCCGTGGGAC
CGCTGACTTCCGCGTCCACCAAGGCAGCTACCAAGACTTGCAACGTTTTG
GACTACGGTGCTAAGGCGGATAAGTCTACTGATCTGGGCGCGCCGTTGGC
ATCTGCCTTCGCTGACTGCAAGTCTGGCGGTCTCGTCTATGTCCCCTCTG
GTGACTATGCTCTCTCCACATGGGCGAGGTTGAGCGGTGGTGAGGCATGG
GCTCTGCAGATCGATGGAATCATCTACCGTACTGGCACGGACGGCGGCAA
CATGATCTATATCGAACACTCTAGCGACTTCGAACTTTTCAGTAGCACCT
CCGAAGGTGCCATGCAGGGCCTGGGCTACGAGTTCCATGCCGATGATAAC
TGGAGCGGCCCTCGTCTGCTGCGACTCTATGAAGTGACGGACTTCTCGGT
CCACGATTTCATCCTGGTTGACTCTCCATCTTTCCACTTCTCTCTCGACA
CTTGCACCAATGGCGAAATCTACAACATGGCAATCCGCGGCGGTAACCAT
GGTGGTCTGGATGGTATTGATGTCTGGAGTAACAACATCTGGGTCCATGA
TGACACGGCAACGCTTACTCTCTGGATATTGACAGCTACTGGGCCAGTAT
GAGCGCGGTGGACGGCGATGGTGTCCAGCTGAGCAACATCACCGTGAAGA
ACTGGAAGGGAACCGAAGCTTACGGTGCTGAGCGTGGTCCTGTCAAGGTG
ATCTGTGCTGATGGTGCCCCTTGCTACGACATTACCATTGAGGACTTCGC
CATGTGGACCGAGGAGGGTGATACTCAGTGGTACTCTTGTGAGAGTGCTT
ATGGCAGCGGATTCTGCCTTCAGGACAGCGACGACCACGTCTCTTACTCG
GCCACCACTTCTACGGTCAGCTCCGCTCCCTCGGGCTACTCTGCGACCTC
CATGGCCGCCGATCTGACCACTGACTTCGGCTCTACTGTCTCTATCCCCA
TCCCGACCATCCCTACCTCTTTCTACCCGGGTGCCACCCCCTACAGTGCT
CTGATGGCCAACAGCGCTTCTACTGCCGCTGCTTCTTCCATTGCCAGCCA
TGCCACTGTCCATAGCAGCAGCGCTTCCGTTGCTGCTTCTGTGCCCAGCG
CTGTCGCCCCTAGCGAGAGCATCCCCGCCGCCACTTCCGCCGTGGTATCC
AGCGCTGCTGCCATTGCCCCCAGCCCCGCTGTGGGTGCCCAGGAGGGGTC
TACCACCTCCGCTCCCAGCTTTGCTGCCCCCAGTGGTGCTGGAAACTCTC
CCCAGGGTCCCACCGGAGCTTCTGGATTCGGCGAGAAGGGCCAGCAGGGT
GAGCAGGGTGAGCAGGGTGAGCAGGGTGAGCAGGGTGAGCAGGGTGAACA
GGGCGAACAGGGCGAACAGGGCGAACAGGGCGAACAGGGCGAACAGGGCG
AACAGGGCGAACAGGGCGAGCAGGGTGTCTGCTACGTGTAAAGCCCATCG
AAGAACATCCTCATTGAGAGCATCTACTGCAACTGGAGTGGTGGATGTGG
TATGGGCTCGTTTGGCTCTGATACCAATGTCAGCGACATCACTTACCGCA
ACATCTACACCTGGAGCTCGAACAACATGATGTTGATCAAGAGCAATGGA
GGTAGCGGCTTCATCGAGAATGTTCTCCTCGAGAACTTCATCGGTCGAGG
TGACGAACAAGGACGAGTGTGTCACAGTCAAGATGCTTCTCGACAAGCTC
TCTGTTCTCTCTTTCCTGGGCCTGGCGCCCATCTTTGCTGCTGCGCAGCT
CTCCGGTTCCGTGGGACCGCTGACTTCCGCGTCCACCAAGGCAGCTACCA
AGACTTGCAACGTTTTGGACTACGGTGCTAAGGCGGATAAGTCTACTGAT
CTGGGCGCGCCGTTGGCATCTGCCTTCGCTGACTGCAAGTCTGGCGGTCT
CGTCTATGTCCCCTCTGGTGACTATGCTCTCTCCACATGGGCGAGGTTGA
GCGGTGGTGAGGCATGGGCTCTGCAGATCGATGGAATCATCTACCGTACT
GGCACGGACGGCGGCAACATGATCTATATCGAACACTCTAGCGACTTCGA
ACTTTTCAGTAGCACCTCCGAAGGTGCCATGCAGGGCCTGGGCTACGAGT
TCCATGCCGATGATAACTGGAGCGGCCCTCGTCTGCTGCGACTCTATGAA
GTGACGGACTTCTCGGTCCACGATTTCATCCTGGTTGACTCTCCATCTTT
CCACTTCTCTCTCGACACTTGCACCAATGGCGAAATCTACAACATGGCAA
TCCGCGGCGGTAACCATGGTGGTCTGGATGGTATTGATGTCTGGAGTAAC
AACATCTGGGTCCATGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004650 | polygalacturonase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-21) |
| Note | CAZy:GH28 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR000743 |
| DBxref | InterPro:IPR008160 |
| DBxref | InterPro:IPR012334 |
| DBxref | PFAM:PF00295 |
| DBxref | PFAM:PF01391 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2744851..2746799 - |
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