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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2766084..2767669+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_001065-T1 ID=KYF_001065-T1|Name=KYF_001065-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1586bp|location=Sequence derived from alignment at ch1:2766084..2767669+ (Aspergillus niger KYF3)
ATGAACGGGCTCGAACAAACGTGCGCATCTTTGCGCACGCAGATTGCTGC
TACTGAAGCCAAACTTGCCGACTTGAAGCGTGAGCTCGAAATTGCAGAAC
AGGCTGCCGCGAGCCACAACCAGAATGCAGCGGATGCTGAAGGAGGATCT
GAGAGGAGATGGCCTCTCCTAGACGAAGAGTATAGACGCTATGGAAGGCA
GATGATTGTGCCGCAGCTAGGGATACAAGGTTAGTAAAATGCGTCCTCTA
GATTTGGGAGATCTAGGATTGCTGATGTTGCGTTCGCAACTCAGGGCAGC
TGAAACTCCGGTCGGCGAAGGTGTTGATTGTAGGAGCTGGTGGATTGGGA
TGCCCGGCAGCTTTGTATCTTGCGGGAGCTGGCGTTGGTACTCTGGGACT
TGTGGATGGAGATGCCGTGGAGTCTTCGAACCTTCACCGTCAGGTATTAC
ATCGGACCAGGAATATTGGGAAGCTCAAGGTGGACAGTGCTATTGAGTAC
TTGAAGGAGTGAGTCAATACCTGTTCTTGGTATTCATGTATCACTCCTGC
AGTATGCTGACTTTGGACTGCTAATTTTAGGCTGAACCCTCACTCCAAGT
ACATCGCTCACAGGGAGCATCTAGCGCCTGAAGCTGCCCCAGAGATCTTC
AGCAACTACGACCTGATTCTCGATTGCACGGACAACCCTGCGACTCGATA
TCTCATCTCGGATACTGCGGTGCTCCTGGGTAAACCACTGGTGTCGGCCT
CTGCACTTCGCACAGAAGGTCAACTAATGGAATTGAACAACCCTCCCCGA
CCTGCGGGCGACAAGACGGGAGGTCCTTGCTACCGCTGTGTGTTTCCGAA
GCCGCCCCCGGCGAATACTGTCACAAGCTGCGCGGATGGGGGTATCGTGG
GCCCCGTGGTGGGAACAATGGGCGTTCTGCAGGCTCTAGAAGCGATCAAG
GTCATTACTGCGGATGAAACAACTACACCCCCACCGCCATCATTGCATAT
CTTTTCCGCATATTCTACACCTCTCTTCCGCACGATCAAACTTCGCTCTC
GTCGGCCAAATTGCGCGGTGTGCTCTGCCGAGGCCAGCGTCACGGTGGAT
ACTGTCCGCTCTGGCTCTACCGACTACATCTTCTTCTGTGGGACCACAGG
TCCAGAGAACTTGCTCTCGCCCGAAGAGCGTATCACGCCGCTCGAGTATC
GCACAAGGCATCATGACAAGGAGGAAAAGGAACCGACGATCATCGACGTC
AGAGAGAAGGTCCAGTACGACATTTGCAGTCTGGAGAATAGCGTCAATAT
CCCGATATCCACGATCCTGGCTTCCGCGTCGAGTTCTATGAGTAACGGTG
ACTCGTTGGCTGATGGTGTGCCCGCGTTGCCTTCATGGGTGCCGCCGGAC
GTGGCATCATCGCAGTCTACCGATCCCGTATATGTGGTGTGTCGACTGGG
CAATGACTCCCAAGTAGCTGTTAAGAAACTGAAAGAGCTGGGATTGGATC
AAGGAGGGAAGAGGGTCGTGGCTGATATCCGGGGAGGATTTCGTGCCTGG
AAAGAGCAGGTTGATCCTGAGTGGCCTGAGTACTAG back to topCoding sequence (CDS) from alignment at ch1:2766084..2767669+ >KYF_001065-T1 ID=KYF_001065-T1|Name=KYF_001065-T1|organism=Aspergillus niger KYF3|type=CDS|length=4347bp|location=Sequence derived from alignment at ch1:2766084..2767669+ (Aspergillus niger KYF3)
ATGAACGGGCTCGAACAAACGTGCGCATCTTTGCGCACGCAGATTGCTGC
TACTGAAGCCAAACTTGCCGACTTGAAGCGTGAGCTCGAAATTGCAGAAC
AGGCTGCCGCGAGCCACAACCAGAATGCAGCGGATGCTGAAGGAGGATCT
GAGAGGAGATGGCCTCTCCTAGACGAAGAGTATAGACGCTATGGAAGGCA
GATGATTGTGCCGCAGCTAGGGATACAAGGGCAGCTGAAACTCCGGTCGG
CGAAGGTGTTGATTGTAGGAGCTGGTGGATTGGGATGCCCGGCAGCTTTG
TATCTTGCGGGAGCTGGCGTTGGTACTCTGGGACTTGTGGATGGAGATGC
CGTGGAGTCTTCGAACCTTCACCGTCAGGTATTACATCGGACCAGGAATA
TTGGGAAGCTCAAGGTGGACAGTGCTATTGAGTACTTGAAGGAGCTGAAC
CCTCACTCCAAGTACATCGCTCACAGGGAGCATCTAGCGCCTGAAGCTGC
CCCAGAGATCTTCAGCAACTACGACCTGATTCTCGATTGCACGGACAACC
CTGCGACTCGATATCTCATCTCGGATACTGCGGTGCTCCTGGGTAAACCA
CTGGTGTCGGCCTCTGCACTTCGCACAGAAGGTCAACTAATGGAATTGAA
CAACCCTCCCCGACCTGCGGGCGACAAGACGGGAGGTCCTTGCTACCGCT
GTGTGTTTCCGAAGCCGCCCCCGGCGAATACTGTCACAAGCTGCGCGGAT
GGGGGTATCGTGGGCCCCGTGGTGGGAACAATGGGCGTTCTGCAGGCTCT
AGAAGCGATCAAGGTCATTACTGCGGATGAAACAACTACACCCCCACCGC
CATCATTGCATATCTTTTCCGCATATTCTACACCTCTCTTCCGCACGATC
AAACTTCGCTCTCGTCGGCCAAATTGCGCGGTGTGCTCTGCCGAGGCCAG
CGTCACGGTGGATACTGTCCGCTCTGGCTCTACCGACTACATCTTCTTCT
GTGGGACCACAGGTCCAGAGAACTTGCTCTCGCCCGAAGAGCGTATCACG
CCGCTCGAGTATCGCACAAGGCATCATGACAAGGAGGAAAAGGAACCGAC
GATCATCGACGTCAGAGAGAAGGTCCAGTACGACATTTGCAGTCTGGAGA
ATAGCGTCAATATCCCGATATCCACGATCCTGGCTTCCGCGTCGAGTTCT
ATGAGTAACGGTGACTCGTTGGCTGATGGTGTGCCCGCGTTGCCTTCATG
GGTGCCGCCGGACGTGGCATCATCGCAGTCTACCGATCCCGTATATGTGG
TGTGTCGACTGGGCAATGACTCCCAAGTAGCTGTTAAGAAACTGAAAGAG
CTGGGATTGGATCAAGGAGGGAAGAGGGTCGTGGCTGATATCCGGGGAGG
ATTTCGTGCCTGGAAAGAGCAGGTTGATCCTGAGTGGCCTGAGTACTAGA
TGAACGGGCTCGAACAAACGTGCGCATCTTTGCGCACGCAGATTGCTGCT
ACTGAAGCCAAACTTGCCGACTTGAAGCGTGAGCTCGAAATTGCAGAACA
GGCTGCCGCGAGCCACAACCAGAATGCAGCGGATGCTGAAGGAGGATCTG
AGAGGAGATGGCCTCTCCTAGACGAAGAGTATAGACGCTATGGAAGGCAG
ATGATTGTGCCGCAGCTAGGGATACAAGGGCAGCTGAAACTCCGGTCGGC
GAAGGTGTTGATTGTAGGAGCTGGTGGATTGGGATGCCCGGCAGCTTTGT
ATCTTGCGGGAGCTGGCGTTGGTACTCTGGGACTTGTGGATGGAGATGCC
GTGGAGTCTTCGAACCTTCACCGTCAGGTATTACATCGGACCAGGAATAT
TGGGAAGCTCAAGGTGGACAGTGCTATTGAGTACTTGAAGGAGCTGAACC
CTCACTCCAAGTACATCGCTCACAGGGAGCATCTAGCGCCTGAAGCTGCC
CCAGAGATCTTCAGCAACTACGACCTGATTCTCGATTGCACGGACAACCC
TGCGACTCGATATCTCATCTCGGATACTGCGGTGCTCCTGGGTAAACCAC
TGGTGTCGGCCTCTGCACTTCGCACAGAAGGTCAACTAATGGAATTGAAC
AACCCTCCCCGACCTGCGGGCGACAAGACGGGAGGTCCTTGCTACCGCTG
TGTGTTTCCGAAGCCGCCCCCGGCGAATACTGTCACAAGCTGCGCGGATG
GGGGTATCGTGGGCCCCGTGGTGGGAACAATGGGCGTTCTGCAGGCTCTA
GAAGCGATCAAGGTCATTACTGCGGATGAAACAACTACACCCCCACCGCC
ATCATTGCATATCTTTTCCGCATATTCTACACCTCTCTTCCGCACGATCA
AACTTCGCTCTCGTCGGCCAAATTGCGCGGTGTGCTCTGCCGAGGCCAGC
GTCACGGTGGATACTGTCCGCTCTGGCTCTACCGACTACATCTTCTTCTG
TGGGACCACAGGTCCAGAGAACTTGCTCTCGCCCGAAGAGCGTATCACGC
CGCTCGAGTATCGCACAAGGCATCATGACAAGGAGGAAAAGGAACCGACG
ATCATCGACGTCAGAGAGAAGGTCCAGTACGACATTTGCAGTCTGGAGAA
TAGCGTCAATATCCCGATATCCACGATCCTGGCTTCCGCGTCGAGTTCTA
TGAGTAACGGTGACTCGTTGGCTGATGGTGTGCCCGCGTTGCCTTCATGG
GTGCCGCCGGACGTGGCATCATCGCAGTCTACCGATCCCGTATATGTGGT
GTGTCGACTGGGCAATGACTCCCAAGTAGCTGTTAAGAAACTGAAAGAGC
TGGGATTGGATCAAGGAGGGAAGAGGGTCGTGGCTGATATCCGGGGAGGA
TTTCGTGCCTGGAAAGAGCAGGTTGATCCTGAGTGGCCTGAGTACTAGAT
GAACGGGCTCGAACAAACGTGCGCATCTTTGCGCACGCAGATTGCTGCTA
CTGAAGCCAAACTTGCCGACTTGAAGCGTGAGCTCGAAATTGCAGAACAG
GCTGCCGCGAGCCACAACCAGAATGCAGCGGATGCTGAAGGAGGATCTGA
GAGGAGATGGCCTCTCCTAGACGAAGAGTATAGACGCTATGGAAGGCAGA
TGATTGTGCCGCAGCTAGGGATACAAGGGCAGCTGAAACTCCGGTCGGCG
AAGGTGTTGATTGTAGGAGCTGGTGGATTGGGATGCCCGGCAGCTTTGTA
TCTTGCGGGAGCTGGCGTTGGTACTCTGGGACTTGTGGATGGAGATGCCG
TGGAGTCTTCGAACCTTCACCGTCAGGTATTACATCGGACCAGGAATATT
GGGAAGCTCAAGGTGGACAGTGCTATTGAGTACTTGAAGGAGCTGAACCC
TCACTCCAAGTACATCGCTCACAGGGAGCATCTAGCGCCTGAAGCTGCCC
CAGAGATCTTCAGCAACTACGACCTGATTCTCGATTGCACGGACAACCCT
GCGACTCGATATCTCATCTCGGATACTGCGGTGCTCCTGGGTAAACCACT
GGTGTCGGCCTCTGCACTTCGCACAGAAGGTCAACTAATGGAATTGAACA
ACCCTCCCCGACCTGCGGGCGACAAGACGGGAGGTCCTTGCTACCGCTGT
GTGTTTCCGAAGCCGCCCCCGGCGAATACTGTCACAAGCTGCGCGGATGG
GGGTATCGTGGGCCCCGTGGTGGGAACAATGGGCGTTCTGCAGGCTCTAG
AAGCGATCAAGGTCATTACTGCGGATGAAACAACTACACCCCCACCGCCA
TCATTGCATATCTTTTCCGCATATTCTACACCTCTCTTCCGCACGATCAA
ACTTCGCTCTCGTCGGCCAAATTGCGCGGTGTGCTCTGCCGAGGCCAGCG
TCACGGTGGATACTGTCCGCTCTGGCTCTACCGACTACATCTTCTTCTGT
GGGACCACAGGTCCAGAGAACTTGCTCTCGCCCGAAGAGCGTATCACGCC
GCTCGAGTATCGCACAAGGCATCATGACAAGGAGGAAAAGGAACCGACGA
TCATCGACGTCAGAGAGAAGGTCCAGTACGACATTTGCAGTCTGGAGAAT
AGCGTCAATATCCCGATATCCACGATCCTGGCTTCCGCGTCGAGTTCTAT
GAGTAACGGTGACTCGTTGGCTGATGGTGTGCCCGCGTTGCCTTCATGGG
TGCCGCCGGACGTGGCATCATCGCAGTCTACCGATCCCGTATATGTGGTG
TGTCGACTGGGCAATGACTCCCAAGTAGCTGTTAAGAAACTGAAAGAGCT
GGGATTGGATCAAGGAGGGAAGAGGGTCGTGGCTGATATCCGGGGAGGAT
TTCGTGCCTGGAAAGAGCAGGTTGATCCTGAGTGGCCTGAGTACTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005829 | cytosol |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0002143 | tRNA wobble position uridine thiolation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004792 | thiosulfate sulfurtransferase activity |
| GO:0008641 | ubiquitin-like modifier activating enzyme activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035985 |
| DBxref | InterPro:IPR028885 |
| DBxref | InterPro:IPR000594 |
| DBxref | InterPro:IPR036873 |
| DBxref | InterPro:IPR001763 |
| DBxref | PFAM:PF00899 |
| DBxref | PFAM:PF00581 |
| Product | Urmylation protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2766084..2767669 + |
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