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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3206128..3207534- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_001217-T1 ID=KYF_001217-T1|Name=KYF_001217-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1407bp|location=Sequence derived from alignment at ch1:3206128..3207534- (Aspergillus niger KYF3)
ATGGCGAAGGTCATTTTTACACCATGGAAGGAGCACTCGCAATTACTCGC
AGTGCGGAGTCAATTCTACCCTGCACCGTTTTATGATGGGCCCGACATGC
GCTCCAAGGCCTGCGCCACTGTATGCGAAAAGGCACCCTGAAATAATATA
GTTATCTTTACTTGACCCTAACATGAATTACAGGTCGCGGCTTGGAAGTT
ACGAGGAAATCTGCCACATCCAGTCGAGGCCACGGCCTTGCTAACGGATG
CTATCCTTCATGATGATGCCCTGAAAAATTCCATCTTTTCTATTCGGGCT
ACGTACTCGGCTGCGTTCTGTCGGTATGACTATCTGCTTTGATTCATCGA
TTACATGATTACGCAACAAGTGTAACGATCACTAACGCCAATTAGATTCG
TGACGGGGCTCGTCGACTCCAAGCTGAACGGGCAGCGTAAAACCATGTTC
CAACGAGCCATTGATCTGGGCCTACCGGCCTCATTTGTGGAACTGCGTCA
CGAGGCGACGCATCGTGAACTGCCTTCTCTAACAGTGCTGCGCAATGCCA
CGCAGCGGTCCCTTGAGTGGCTGTGGAACTACTACTGGGCCAAGACTGAT
CTGAGTGCTGATATGGTGCCCGTGTCAGAACCTGAGGCATTTGACGGTGC
TGAAGATGACGTCGAGCCCATCAAGGCGGCTTTAAGAACTGAGTTCGAGC
ACTTACTGGCTGAAGAAGATTCGTCAGAACCGCCGCGGAAGAAGAGGAGG
TTCCAGCAGAACGTCTCGTCTACGTCTACGCATTTGGTCTCGATATGCAA
GTCTTCCAGTCGTGGGGCGTCTGCGCTAGCAGGCGTGATCGTGGAGGACT
CGGTGTTGGTTCCTGCTGGACGGAAGTGAGTTTTCTTGATATTCTGATCG
TGTATGAACATCTATAAGCTGACTTGGTACAGGATGGGTGATTCCATGAC
GGGCATGTTCGCTAAGTGGGATTCATTATTGCAGATGCTCGCGGAGGGCC
ATCCCCCGGTCCTGGCATCGCTGACGGAGGAGATGGTGAATGTACTCGCC
TTTTCGGGCTCAAAGAACGTGAAAAGCGACCCTCAGCTCGAAGGATTATA
CATGTGGCTGGACCATATACTTCAATCGCCAGAATGGGGGTCTCGAAGAC
GACTACTGTCCCACGCATATCTTCTTGCCGTTTGCGAGCAGAGTTCCAAC
CACTGGACGACGCTTCTTAAGGAAAGCTTACAGCAGAGGACGGACGATTT
AGCACCTAGCAAGCAGTCGTCCACGTCAAAGAAGCAGTCGAAGAAGGACG
GATCTGGTCTCAAGCGGACTGCAGATGCCGACGACTTGAAAGAGTTGAAG
AAATTCGGATGGGAGACGGTAGATACGTGGGATACGCGACCGTTAGGGAT
AGTATAG back to topCoding sequence (CDS) from alignment at ch1:3206128..3207534- >KYF_001217-T1 ID=KYF_001217-T1|Name=KYF_001217-T1|organism=Aspergillus niger KYF3|type=CDS|length=4860bp|location=Sequence derived from alignment at ch1:3206128..3207534- (Aspergillus niger KYF3)
GATGGGTGATTCCATGACGGGCATGTTCGCTAAGTGGGATTCATTATTGC
AGATGCTCGCGGAGGGCCATCCCCCGGTCCTGGCATCGCTGACGGAGGAG
ATGGTGAATGTACTCGCCTTTTCGGGCTCAAAGAACGTGAAAAGCGACCC
TCAGCTCGAAGGATTATACATGTGGCTGGACCATATACTTCAATCGCCAG
AATGGGGGTCTCGAAGACGACTACTGTCCCACGCATATCTTCTTGCCGTT
TGCGAGCAGAGTTCCAACCACTGGACGACGCTTCTTAAGGAAAGCTTACA
GCAGAGGACGGACGATTTAGCACCTAGCAAGCAGTCGTCCACGTCAAAGA
AGCAGTCGAAGAAGGACGGATCTGGTCTCAAGCGGACTGCAGATGCCGAC
GACTTGAAAGAGTTGAAGAAATTCGGATGGGAGACGGTAGATACGTGGGA
TACGCGACCGTTAGGGATAGTATAGATTCGTGACGGGGCTCGTCGACTCC
AAGCTGAACGGGCAGCGTAAAACCATGTTCCAACGAGCCATTGATCTGGG
CCTACCGGCCTCATTTGTGGAACTGCGTCACGAGGCGACGCATCGTGAAC
TGCCTTCTCTAACAGTGCTGCGCAATGCCACGCAGCGGTCCCTTGAGTGG
CTGTGGAACTACTACTGGGCCAAGACTGATCTGAGTGCTGATATGGTGCC
CGTGTCAGAACCTGAGGCATTTGACGGTGCTGAAGATGACGTCGAGCCCA
TCAAGGCGGCTTTAAGAACTGAGTTCGAGCACTTACTGGCTGAAGAAGAT
TCGTCAGAACCGCCGCGGAAGAAGAGGAGGTTCCAGCAGAACGTCTCGTC
TACGTCTACGCATTTGGTCTCGATATGCAAGTCTTCCAGTCGTGGGGCGT
CTGCGCTAGCAGGCGTGATCGTGGAGGACTCGGTGTTGGTTCCTGCTGGA
CGGAAGTCGCGGCTTGGAAGTTACGAGGAAATCTGCCACATCCAGTCGAG
GCCACGGCCTTGCTAACGGATGCTATCCTTCATGATGATGCCCTGAAAAA
TTCCATCTTTTCTATTCGGGCTACGTACTCGGCTGCGTTCTGTCGATGGC
GAAGGTCATTTTTACACCATGGAAGGAGCACTCGCAATTACTCGCAGTGC
GGAGTCAATTCTACCCTGCACCGTTTTATGATGGGCCCGACATGCGCTCC
AAGGCCTGCGCCACTGATGGGTGATTCCATGACGGGCATGTTCGCTAAGT
GGGATTCATTATTGCAGATGCTCGCGGAGGGCCATCCCCCGGTCCTGGCA
TCGCTGACGGAGGAGATGGTGAATGTACTCGCCTTTTCGGGCTCAAAGAA
CGTGAAAAGCGACCCTCAGCTCGAAGGATTATACATGTGGCTGGACCATA
TACTTCAATCGCCAGAATGGGGGTCTCGAAGACGACTACTGTCCCACGCA
TATCTTCTTGCCGTTTGCGAGCAGAGTTCCAACCACTGGACGACGCTTCT
TAAGGAAAGCTTACAGCAGAGGACGGACGATTTAGCACCTAGCAAGCAGT
CGTCCACGTCAAAGAAGCAGTCGAAGAAGGACGGATCTGGTCTCAAGCGG
ACTGCAGATGCCGACGACTTGAAAGAGTTGAAGAAATTCGGATGGGAGAC
GGTAGATACGTGGGATACGCGACCGTTAGGGATAGTATAGATTCGTGACG
GGGCTCGTCGACTCCAAGCTGAACGGGCAGCGTAAAACCATGTTCCAACG
AGCCATTGATCTGGGCCTACCGGCCTCATTTGTGGAACTGCGTCACGAGG
CGACGCATCGTGAACTGCCTTCTCTAACAGTGCTGCGCAATGCCACGCAG
CGGTCCCTTGAGTGGCTGTGGAACTACTACTGGGCCAAGACTGATCTGAG
TGCTGATATGGTGCCCGTGTCAGAACCTGAGGCATTTGACGGTGCTGAAG
ATGACGTCGAGCCCATCAAGGCGGCTTTAAGAACTGAGTTCGAGCACTTA
CTGGCTGAAGAAGATTCGTCAGAACCGCCGCGGAAGAAGAGGAGGTTCCA
GCAGAACGTCTCGTCTACGTCTACGCATTTGGTCTCGATATGCAAGTCTT
CCAGTCGTGGGGCGTCTGCGCTAGCAGGCGTGATCGTGGAGGACTCGGTG
TTGGTTCCTGCTGGACGGAAGTCGCGGCTTGGAAGTTACGAGGAAATCTG
CCACATCCAGTCGAGGCCACGGCCTTGCTAACGGATGCTATCCTTCATGA
TGATGCCCTGAAAAATTCCATCTTTTCTATTCGGGCTACGTACTCGGCTG
CGTTCTGTCGATGGCGAAGGTCATTTTTACACCATGGAAGGAGCACTCGC
AATTACTCGCAGTGCGGAGTCAATTCTACCCTGCACCGTTTTATGATGGG
CCCGACATGCGCTCCAAGGCCTGCGCCACTGATGGGTGATTCCATGACGG
GCATGTTCGCTAAGTGGGATTCATTATTGCAGATGCTCGCGGAGGGCCAT
CCCCCGGTCCTGGCATCGCTGACGGAGGAGATGGTGAATGTACTCGCCTT
TTCGGGCTCAAAGAACGTGAAAAGCGACCCTCAGCTCGAAGGATTATACA
TGTGGCTGGACCATATACTTCAATCGCCAGAATGGGGGTCTCGAAGACGA
CTACTGTCCCACGCATATCTTCTTGCCGTTTGCGAGCAGAGTTCCAACCA
CTGGACGACGCTTCTTAAGGAAAGCTTACAGCAGAGGACGGACGATTTAG
CACCTAGCAAGCAGTCGTCCACGTCAAAGAAGCAGTCGAAGAAGGACGGA
TCTGGTCTCAAGCGGACTGCAGATGCCGACGACTTGAAAGAGTTGAAGAA
ATTCGGATGGGAGACGGTAGATACGTGGGATACGCGACCGTTAGGGATAG
TATAGATTCGTGACGGGGCTCGTCGACTCCAAGCTGAACGGGCAGCGTAA
AACCATGTTCCAACGAGCCATTGATCTGGGCCTACCGGCCTCATTTGTGG
AACTGCGTCACGAGGCGACGCATCGTGAACTGCCTTCTCTAACAGTGCTG
CGCAATGCCACGCAGCGGTCCCTTGAGTGGCTGTGGAACTACTACTGGGC
CAAGACTGATCTGAGTGCTGATATGGTGCCCGTGTCAGAACCTGAGGCAT
TTGACGGTGCTGAAGATGACGTCGAGCCCATCAAGGCGGCTTTAAGAACT
GAGTTCGAGCACTTACTGGCTGAAGAAGATTCGTCAGAACCGCCGCGGAA
GAAGAGGAGGTTCCAGCAGAACGTCTCGTCTACGTCTACGCATTTGGTCT
CGATATGCAAGTCTTCCAGTCGTGGGGCGTCTGCGCTAGCAGGCGTGATC
GTGGAGGACTCGGTGTTGGTTCCTGCTGGACGGAAGTCGCGGCTTGGAAG
TTACGAGGAAATCTGCCACATCCAGTCGAGGCCACGGCCTTGCTAACGGA
TGCTATCCTTCATGATGATGCCCTGAAAAATTCCATCTTTTCTATTCGGG
CTACGTACTCGGCTGCGTTCTGTCGATGGCGAAGGTCATTTTTACACCAT
GGAAGGAGCACTCGCAATTACTCGCAGTGCGGAGTCAATTCTACCCTGCA
CCGTTTTATGATGGGCCCGACATGCGCTCCAAGGCCTGCGCCACTGATGG
GTGATTCCATGACGGGCATGTTCGCTAAGTGGGATTCATTATTGCAGATG
CTCGCGGAGGGCCATCCCCCGGTCCTGGCATCGCTGACGGAGGAGATGGT
GAATGTACTCGCCTTTTCGGGCTCAAAGAACGTGAAAAGCGACCCTCAGC
TCGAAGGATTATACATGTGGCTGGACCATATACTTCAATCGCCAGAATGG
GGGTCTCGAAGACGACTACTGTCCCACGCATATCTTCTTGCCGTTTGCGA
GCAGAGTTCCAACCACTGGACGACGCTTCTTAAGGAAAGCTTACAGCAGA
GGACGGACGATTTAGCACCTAGCAAGCAGTCGTCCACGTCAAAGAAGCAG
TCGAAGAAGGACGGATCTGGTCTCAAGCGGACTGCAGATGCCGACGACTT
GAAAGAGTTGAAGAAATTCGGATGGGAGACGGTAGATACGTGGGATACGC
GACCGTTAGGGATAGTATAGATTCGTGACGGGGCTCGTCGACTCCAAGCT
GAACGGGCAGCGTAAAACCATGTTCCAACGAGCCATTGATCTGGGCCTAC
CGGCCTCATTTGTGGAACTGCGTCACGAGGCGACGCATCGTGAACTGCCT
TCTCTAACAGTGCTGCGCAATGCCACGCAGCGGTCCCTTGAGTGGCTGTG
GAACTACTACTGGGCCAAGACTGATCTGAGTGCTGATATGGTGCCCGTGT
CAGAACCTGAGGCATTTGACGGTGCTGAAGATGACGTCGAGCCCATCAAG
GCGGCTTTAAGAACTGAGTTCGAGCACTTACTGGCTGAAGAAGATTCGTC
AGAACCGCCGCGGAAGAAGAGGAGGTTCCAGCAGAACGTCTCGTCTACGT
CTACGCATTTGGTCTCGATATGCAAGTCTTCCAGTCGTGGGGCGTCTGCG
CTAGCAGGCGTGATCGTGGAGGACTCGGTGTTGGTTCCTGCTGGACGGAA
GTCGCGGCTTGGAAGTTACGAGGAAATCTGCCACATCCAGTCGAGGCCAC
GGCCTTGCTAACGGATGCTATCCTTCATGATGATGCCCTGAAAAATTCCA
TCTTTTCTATTCGGGCTACGTACTCGGCTGCGTTCTGTCGATGGCGAAGG
TCATTTTTACACCATGGAAGGAGCACTCGCAATTACTCGCAGTGCGGAGT
CAATTCTACCCTGCACCGTTTTATGATGGGCCCGACATGCGCTCCAAGGC
CTGCGCCACT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0090730 | Las1 complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006364 | rRNA processing |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004519 | endonuclease activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007174 |
| DBxref | PFAM:PF04031 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3206128..3207534 - |
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