You are here

Home

KYF_001474-T1, KYF_001474-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_001474-T1
Unique NameKYF_001474-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:538813..540661-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_001474-T1 ID=KYF_001474-T1|Name=KYF_001474-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1849bp|location=Sequence derived from alignment at ch2:538813..540661- (Aspergillus niger KYF3)
ATGCCCTCTCCATCCCCCTCCAGCACCTCCTCCCTATCCAACATCCCAAC
CGCCCACGCGAGCTTCGAGCCCGTCCGCACCTCCGAAACCCGAACCCTAA
GCCGGCCGCAAACCAACATCGAGGTCTCGCGCATCGAGACCCTCCGTCTA
ACGCACGAATCCACCGTCGGGTCCAAGGCGCCTCAGACTCCCCGGGATGA
ATGGCTACCTATGGGTGGGGGGAAAGAGTTTCCCCCGTCACTACCGGATC
CGGATCGCTATGTAGTCGAGTTTACGGGTGAGGGGGATCCGATGCATCCG
CATAATTGGCCGATTGGGACGAAGTGTGTATTTTGCTATCTATGTATATA
TAGAGGGATTTGGTGAATATACGCTGACATGGGAATGGAATAATATAGGA
TCCTCCTATCAGGCATCCTAGCTTACGTGACGTTTACTGCGTCGTTCGCT
AGCGCGATATTCTCTTCAACGGTTGGGGCAATCAGTCTTCACTATGGAAT
CAGCACCGAGGTCGCGACGCTCGGTGTGACGTTGTATGTACTTGGGTTCG
CGGCGGGGCCGACGTTCTGGGCGCCTGCGTCGGAGCTGTCTGGGCGGCGG
TGGCCCATCACGGCTGGGGTATTTGGGTATAGTATCTTTACTGTGGCGAC
GGCGACAGCCAAGGATGTGCAGACCATCATGCTGACGCGGTTCTTTGCTG
GGTTGTTCGCGGCGAGTCCGTTGTCGATTGTGCCGGCGGCGTTTTCGGAT
ATCTACAATAACCGGACGCGGGGGATTGCGATCGCGATGTTTGCCATGGC
GGTGTTTGTGGGGCCATTTGCGTCGCCGTTTACGGGGGGTTTCATCGTGA
TGAGTTATCTGGGGTGGAGGTGGACGATGTATATTGCGGCGATCATGGGG
TTTTTGGGGTCGGCGCTGTTGTTGTTGTTTTACAAGGAGACGTATGCGCC
GGCGCTGTTGATGGCTAAGGCGGCGACGGTGAGGAGACAGACACGAAATT
GGGGGATTCATGCTAAGCAGGATGAGGTGGAGGTTGATTTTCGGGAGCTG
ATTACGGTGAATTTTAGTCGGCCGTTTCGGATGTTGCTTACGGAGCCGAT
TGTGTTCCTGGTCACGCTGTACATGTCGTTCATATATGGGCTCATGTATG
CTTTGCTGGCGGCGTATCCGGTGGTGTTTCAGGATATTCATGGGATGAAT
CTTGGGGTGGGCAGTCTACCGTTTATTGGGCTGATCATTGGGGAGATTCT
GGGAGGGGTGTTTGTCTTGTCGAGTCAGGGCTCGTATACCAAGAAGTTGA
GGGCGAATAACGACATTCCCATCCCTGAGTGGCGGTTACCCCCGGCCATT
GTGGGGGGCATCTCTTTCACCATTGGACTCTTCTGGTAAGGTGCCTTTCT
GCTGGGTGAGTATCTGGCTGATCTGAATAGGTATGGCTGGACCGGATGGA
CGCGGTCGATCCATTGGATGGCCCCGACAGCGTCCGGGCTGTTCACGGGG
TTCGGCATCTACTGCATCTTTCTGCAGTGTTTCAACTACCTGATCGATTC
GTATCTGCAGTTGTAAGCTCCTTCTCATGACGCAAATCATTGAAAGCTTC
TGACCGAACAGCGCCGCCTCGGTCTTTGCCGCCAACACCATCCTGCGGTC
TGCAGTCGGGGCATGCTTCCCTCTCTTTGCGCGACAGATGTTTGTCAATC
TGGGGGTGCAGTGGGCGGGCACATTGCTGGGGTGTCTGGCGGCGATTATG
ATCCCGATTCCCGTGGGGTTCATCATGTTTGGACCCGCCTTACGGCGGAG
GAGCAAGTTTGCCCCGGCGGCGGCGGTGTTCCAGGAAAAGTCAGCCTAG
back to top

Coding sequence (CDS) from alignment at ch2:538813..540661-

>KYF_001474-T1 ID=KYF_001474-T1|Name=KYF_001474-T1|organism=Aspergillus niger KYF3|type=CDS|length=6720bp|location=Sequence derived from alignment at ch2:538813..540661- (Aspergillus niger KYF3)
CGCCGCCTCGGTCTTTGCCGCCAACACCATCCTGCGGTCTGCAGTCGGGG
CATGCTTCCCTCTCTTTGCGCGACAGATGTTTGTCAATCTGGGGGTGCAG
TGGGCGGGCACATTGCTGGGGTGTCTGGCGGCGATTATGATCCCGATTCC
CGTGGGGTTCATCATGTTTGGACCCGCCTTACGGCGGAGGAGCAAGTTTG
CCCCGGCGGCGGCGGTGTTCCAGGAAAAGTCAGCCTAGGTATGGCTGGAC
CGGATGGACGCGGTCGATCCATTGGATGGCCCCGACAGCGTCCGGGCTGT
TCACGGGGTTCGGCATCTACTGCATCTTTCTGCAGTGTTTCAACTACCTG
ATCGATTCGTATCTGCAGTTGATCCTCCTATCAGGCATCCTAGCTTACGT
GACGTTTACTGCGTCGTTCGCTAGCGCGATATTCTCTTCAACGGTTGGGG
CAATCAGTCTTCACTATGGAATCAGCACCGAGGTCGCGACGCTCGGTGTG
ACGTTGTATGTACTTGGGTTCGCGGCGGGGCCGACGTTCTGGGCGCCTGC
GTCGGAGCTGTCTGGGCGGCGGTGGCCCATCACGGCTGGGGTATTTGGGT
ATAGTATCTTTACTGTGGCGACGGCGACAGCCAAGGATGTGCAGACCATC
ATGCTGACGCGGTTCTTTGCTGGGTTGTTCGCGGCGAGTCCGTTGTCGAT
TGTGCCGGCGGCGTTTTCGGATATCTACAATAACCGGACGCGGGGGATTG
CGATCGCGATGTTTGCCATGGCGGTGTTTGTGGGGCCATTTGCGTCGCCG
TTTACGGGGGGTTTCATCGTGATGAGTTATCTGGGGTGGAGGTGGACGAT
GTATATTGCGGCGATCATGGGGTTTTTGGGGTCGGCGCTGTTGTTGTTGT
TTTACAAGGAGACGTATGCGCCGGCGCTGTTGATGGCTAAGGCGGCGACG
GTGAGGAGACAGACACGAAATTGGGGGATTCATGCTAAGCAGGATGAGGT
GGAGGTTGATTTTCGGGAGCTGATTACGGTGAATTTTAGTCGGCCGTTTC
GGATGTTGCTTACGGAGCCGATTGTGTTCCTGGTCACGCTGTACATGTCG
TTCATATATGGGCTCATGTATGCTTTGCTGGCGGCGTATCCGGTGGTGTT
TCAGGATATTCATGGGATGAATCTTGGGGTGGGCAGTCTACCGTTTATTG
GGCTGATCATTGGGGAGATTCTGGGAGGGGTGTTTGTCTTGTCGAGTCAG
GGCTCGTATACCAAGAAGTTGAGGGCGAATAACGACATTCCCATCCCTGA
GTGGCGGTTACCCCCGGCCATTGTGGGGGGCATCTCTTTCACCATTGGAC
TCTTCTGATGCCCTCTCCATCCCCCTCCAGCACCTCCTCCCTATCCAACA
TCCCAACCGCCCACGCGAGCTTCGAGCCCGTCCGCACCTCCGAAACCCGA
ACCCTAAGCCGGCCGCAAACCAACATCGAGGTCTCGCGCATCGAGACCCT
CCGTCTAACGCACGAATCCACCGTCGGGTCCAAGGCGCCTCAGACTCCCC
GGGATGAATGGCTACCTATGGGTGGGGGGAAAGAGTTTCCCCCGTCACTA
CCGGATCCGGATCGCTATGTAGTCGAGTTTACGGGTGAGGGGGATCCGAT
GCATCCGCATAATTGGCCGATTGGGACGAACGCCGCCTCGGTCTTTGCCG
CCAACACCATCCTGCGGTCTGCAGTCGGGGCATGCTTCCCTCTCTTTGCG
CGACAGATGTTTGTCAATCTGGGGGTGCAGTGGGCGGGCACATTGCTGGG
GTGTCTGGCGGCGATTATGATCCCGATTCCCGTGGGGTTCATCATGTTTG
GACCCGCCTTACGGCGGAGGAGCAAGTTTGCCCCGGCGGCGGCGGTGTTC
CAGGAAAAGTCAGCCTAGGTATGGCTGGACCGGATGGACGCGGTCGATCC
ATTGGATGGCCCCGACAGCGTCCGGGCTGTTCACGGGGTTCGGCATCTAC
TGCATCTTTCTGCAGTGTTTCAACTACCTGATCGATTCGTATCTGCAGTT
GATCCTCCTATCAGGCATCCTAGCTTACGTGACGTTTACTGCGTCGTTCG
CTAGCGCGATATTCTCTTCAACGGTTGGGGCAATCAGTCTTCACTATGGA
ATCAGCACCGAGGTCGCGACGCTCGGTGTGACGTTGTATGTACTTGGGTT
CGCGGCGGGGCCGACGTTCTGGGCGCCTGCGTCGGAGCTGTCTGGGCGGC
GGTGGCCCATCACGGCTGGGGTATTTGGGTATAGTATCTTTACTGTGGCG
ACGGCGACAGCCAAGGATGTGCAGACCATCATGCTGACGCGGTTCTTTGC
TGGGTTGTTCGCGGCGAGTCCGTTGTCGATTGTGCCGGCGGCGTTTTCGG
ATATCTACAATAACCGGACGCGGGGGATTGCGATCGCGATGTTTGCCATG
GCGGTGTTTGTGGGGCCATTTGCGTCGCCGTTTACGGGGGGTTTCATCGT
GATGAGTTATCTGGGGTGGAGGTGGACGATGTATATTGCGGCGATCATGG
GGTTTTTGGGGTCGGCGCTGTTGTTGTTGTTTTACAAGGAGACGTATGCG
CCGGCGCTGTTGATGGCTAAGGCGGCGACGGTGAGGAGACAGACACGAAA
TTGGGGGATTCATGCTAAGCAGGATGAGGTGGAGGTTGATTTTCGGGAGC
TGATTACGGTGAATTTTAGTCGGCCGTTTCGGATGTTGCTTACGGAGCCG
ATTGTGTTCCTGGTCACGCTGTACATGTCGTTCATATATGGGCTCATGTA
TGCTTTGCTGGCGGCGTATCCGGTGGTGTTTCAGGATATTCATGGGATGA
ATCTTGGGGTGGGCAGTCTACCGTTTATTGGGCTGATCATTGGGGAGATT
CTGGGAGGGGTGTTTGTCTTGTCGAGTCAGGGCTCGTATACCAAGAAGTT
GAGGGCGAATAACGACATTCCCATCCCTGAGTGGCGGTTACCCCCGGCCA
TTGTGGGGGGCATCTCTTTCACCATTGGACTCTTCTGATGCCCTCTCCAT
CCCCCTCCAGCACCTCCTCCCTATCCAACATCCCAACCGCCCACGCGAGC
TTCGAGCCCGTCCGCACCTCCGAAACCCGAACCCTAAGCCGGCCGCAAAC
CAACATCGAGGTCTCGCGCATCGAGACCCTCCGTCTAACGCACGAATCCA
CCGTCGGGTCCAAGGCGCCTCAGACTCCCCGGGATGAATGGCTACCTATG
GGTGGGGGGAAAGAGTTTCCCCCGTCACTACCGGATCCGGATCGCTATGT
AGTCGAGTTTACGGGTGAGGGGGATCCGATGCATCCGCATAATTGGCCGA
TTGGGACGAACGCCGCCTCGGTCTTTGCCGCCAACACCATCCTGCGGTCT
GCAGTCGGGGCATGCTTCCCTCTCTTTGCGCGACAGATGTTTGTCAATCT
GGGGGTGCAGTGGGCGGGCACATTGCTGGGGTGTCTGGCGGCGATTATGA
TCCCGATTCCCGTGGGGTTCATCATGTTTGGACCCGCCTTACGGCGGAGG
AGCAAGTTTGCCCCGGCGGCGGCGGTGTTCCAGGAAAAGTCAGCCTAGGT
ATGGCTGGACCGGATGGACGCGGTCGATCCATTGGATGGCCCCGACAGCG
TCCGGGCTGTTCACGGGGTTCGGCATCTACTGCATCTTTCTGCAGTGTTT
CAACTACCTGATCGATTCGTATCTGCAGTTGATCCTCCTATCAGGCATCC
TAGCTTACGTGACGTTTACTGCGTCGTTCGCTAGCGCGATATTCTCTTCA
ACGGTTGGGGCAATCAGTCTTCACTATGGAATCAGCACCGAGGTCGCGAC
GCTCGGTGTGACGTTGTATGTACTTGGGTTCGCGGCGGGGCCGACGTTCT
GGGCGCCTGCGTCGGAGCTGTCTGGGCGGCGGTGGCCCATCACGGCTGGG
GTATTTGGGTATAGTATCTTTACTGTGGCGACGGCGACAGCCAAGGATGT
GCAGACCATCATGCTGACGCGGTTCTTTGCTGGGTTGTTCGCGGCGAGTC
CGTTGTCGATTGTGCCGGCGGCGTTTTCGGATATCTACAATAACCGGACG
CGGGGGATTGCGATCGCGATGTTTGCCATGGCGGTGTTTGTGGGGCCATT
TGCGTCGCCGTTTACGGGGGGTTTCATCGTGATGAGTTATCTGGGGTGGA
GGTGGACGATGTATATTGCGGCGATCATGGGGTTTTTGGGGTCGGCGCTG
TTGTTGTTGTTTTACAAGGAGACGTATGCGCCGGCGCTGTTGATGGCTAA
GGCGGCGACGGTGAGGAGACAGACACGAAATTGGGGGATTCATGCTAAGC
AGGATGAGGTGGAGGTTGATTTTCGGGAGCTGATTACGGTGAATTTTAGT
CGGCCGTTTCGGATGTTGCTTACGGAGCCGATTGTGTTCCTGGTCACGCT
GTACATGTCGTTCATATATGGGCTCATGTATGCTTTGCTGGCGGCGTATC
CGGTGGTGTTTCAGGATATTCATGGGATGAATCTTGGGGTGGGCAGTCTA
CCGTTTATTGGGCTGATCATTGGGGAGATTCTGGGAGGGGTGTTTGTCTT
GTCGAGTCAGGGCTCGTATACCAAGAAGTTGAGGGCGAATAACGACATTC
CCATCCCTGAGTGGCGGTTACCCCCGGCCATTGTGGGGGGCATCTCTTTC
ACCATTGGACTCTTCTGATGCCCTCTCCATCCCCCTCCAGCACCTCCTCC
CTATCCAACATCCCAACCGCCCACGCGAGCTTCGAGCCCGTCCGCACCTC
CGAAACCCGAACCCTAAGCCGGCCGCAAACCAACATCGAGGTCTCGCGCA
TCGAGACCCTCCGTCTAACGCACGAATCCACCGTCGGGTCCAAGGCGCCT
CAGACTCCCCGGGATGAATGGCTACCTATGGGTGGGGGGAAAGAGTTTCC
CCCGTCACTACCGGATCCGGATCGCTATGTAGTCGAGTTTACGGGTGAGG
GGGATCCGATGCATCCGCATAATTGGCCGATTGGGACGAACGCCGCCTCG
GTCTTTGCCGCCAACACCATCCTGCGGTCTGCAGTCGGGGCATGCTTCCC
TCTCTTTGCGCGACAGATGTTTGTCAATCTGGGGGTGCAGTGGGCGGGCA
CATTGCTGGGGTGTCTGGCGGCGATTATGATCCCGATTCCCGTGGGGTTC
ATCATGTTTGGACCCGCCTTACGGCGGAGGAGCAAGTTTGCCCCGGCGGC
GGCGGTGTTCCAGGAAAAGTCAGCCTAGGTATGGCTGGACCGGATGGACG
CGGTCGATCCATTGGATGGCCCCGACAGCGTCCGGGCTGTTCACGGGGTT
CGGCATCTACTGCATCTTTCTGCAGTGTTTCAACTACCTGATCGATTCGT
ATCTGCAGTTGATCCTCCTATCAGGCATCCTAGCTTACGTGACGTTTACT
GCGTCGTTCGCTAGCGCGATATTCTCTTCAACGGTTGGGGCAATCAGTCT
TCACTATGGAATCAGCACCGAGGTCGCGACGCTCGGTGTGACGTTGTATG
TACTTGGGTTCGCGGCGGGGCCGACGTTCTGGGCGCCTGCGTCGGAGCTG
TCTGGGCGGCGGTGGCCCATCACGGCTGGGGTATTTGGGTATAGTATCTT
TACTGTGGCGACGGCGACAGCCAAGGATGTGCAGACCATCATGCTGACGC
GGTTCTTTGCTGGGTTGTTCGCGGCGAGTCCGTTGTCGATTGTGCCGGCG
GCGTTTTCGGATATCTACAATAACCGGACGCGGGGGATTGCGATCGCGAT
GTTTGCCATGGCGGTGTTTGTGGGGCCATTTGCGTCGCCGTTTACGGGGG
GTTTCATCGTGATGAGTTATCTGGGGTGGAGGTGGACGATGTATATTGCG
GCGATCATGGGGTTTTTGGGGTCGGCGCTGTTGTTGTTGTTTTACAAGGA
GACGTATGCGCCGGCGCTGTTGATGGCTAAGGCGGCGACGGTGAGGAGAC
AGACACGAAATTGGGGGATTCATGCTAAGCAGGATGAGGTGGAGGTTGAT
TTTCGGGAGCTGATTACGGTGAATTTTAGTCGGCCGTTTCGGATGTTGCT
TACGGAGCCGATTGTGTTCCTGGTCACGCTGTACATGTCGTTCATATATG
GGCTCATGTATGCTTTGCTGGCGGCGTATCCGGTGGTGTTTCAGGATATT
CATGGGATGAATCTTGGGGTGGGCAGTCTACCGTTTATTGGGCTGATCAT
TGGGGAGATTCTGGGAGGGGTGTTTGTCTTGTCGAGTCAGGGCTCGTATA
CCAAGAAGTTGAGGGCGAATAACGACATTCCCATCCCTGAGTGGCGGTTA
CCCCCGGCCATTGTGGGGGGCATCTCTTTCACCATTGGACTCTTCTGATG
CCCTCTCCATCCCCCTCCAGCACCTCCTCCCTATCCAACATCCCAACCGC
CCACGCGAGCTTCGAGCCCGTCCGCACCTCCGAAACCCGAACCCTAAGCC
GGCCGCAAACCAACATCGAGGTCTCGCGCATCGAGACCCTCCGTCTAACG
CACGAATCCACCGTCGGGTCCAAGGCGCCTCAGACTCCCCGGGATGAATG
GCTACCTATGGGTGGGGGGAAAGAGTTTCCCCCGTCACTACCGGATCCGG
ATCGCTATGTAGTCGAGTTTACGGGTGAGGGGGATCCGATGCATCCGCAT
AATTGGCCGATTGGGACGAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_001474KYF_001474Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_001474-T1KYF_001474-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001474-T1.cdsKYF_001474-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001474-T1.exon4KYF_001474-T1.exon4Aspergillus niger KYF3exon
KYF_001474-T1.exon3KYF_001474-T1.exon3Aspergillus niger KYF3exon
KYF_001474-T1.exon2KYF_001474-T1.exon2Aspergillus niger KYF3exon
KYF_001474-T1.exon1KYF_001474-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteantiSMASH:Cluster_2.4
NoteSMCOG1106:major facilitator transporter
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:538813..540661 -
Powered by Drupal