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KYF_001779-T1, KYF_001779-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_001779-T1
Unique NameKYF_001779-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1497102..1498257-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_001779-T1 ID=KYF_001779-T1|Name=KYF_001779-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1156bp|location=Sequence derived from alignment at ch2:1497102..1498257- (Aspergillus niger KYF3)
ATGCCCCGATACGCAGAAGACCACGACCGCTACGATGACAGCAACCGCGC
ATTTCTCCAAGCCTTCATGGCGCGGTCCACCATGACCTTTACACAAGCAA
AGCCCGTTCTGGCTGCTATATTCTCCATCCGAGGTAATCCTCCCATACTC
TACTCATACACCAAAATACCAAACTAAATCCGGATCAATATAGACGACGA
ACAAATCTCCCCAGAAGACATAACGGAAGACGACCTCCAAACCTACATCG
CCGCCGCCAACAGCGCCATATCCCCCTTCGATCTCGAAATCCGGAGCATA
ATACCCCAGATTGAAATCAACAACCACAATGACCCTCCCCCAGCTCCGGA
ACGAGTCTACGCCCTCGTCAACACAACCAGCGACTCCCTCACTCAGCTCG
CAACAACATACTCCGCCGACGAAATCGCCTTCGTGAAGCGCATCCTCGAC
GCCATGTTCGACACATACAATACCCGCCGCCAGGAAGCAATGGTCATAAG
TAGTATGCAGGCATTGCAGCTGGCCAAGGCTGGTGCAGGGGACGCAAATA
GACGGGAATCAGGAACACAGCAGCAAGCGACGCAGGGAGGCGCTGCACAG
TCGTTGACTATGACGCAGGCGGAGACGATGCTGAAGCAGCTTGTCGAGCA
GGGGTGGTTTGAGAAGAGCAGGAAGGGGTATTATCGGTTGAGTCCGCGCG
GGTTGATGGAGTTGAGGGGGTGGTTGGTAGCGGCGTATAATGATGAGGGG
ATTAGGAAGATTAAGTTCTGTGCTGCGTGTAGGGATATCATTACTGCTGT
GAGTTGGAGAGTATTCCTTGCTATGCGGGCTTGTTGGCTAATGATTCTGT
GATTGTGTTTAGGGCCAACGATGCGGAGACCGCGATTGTACTGGACGATT
GCACGATCACTGCATGCGGAATTTCTTTCGTATGCAACAGGCTGAAAGCT
GTCCTGTGTGCAAGGCTGCGTGGCCGGGTGACAGATACGTTGGTGAGCGC
GCGATTACTATGTCTGATCCGGCAGCACAGAGGGCTAGACGGTCGGCTGC
GAATACTCAGCAGGCGGAAGCTGGGCCTAGTACGCAGTTCACGTTGCCTG
AACTGGATGTTGAAGATGAAGGGGATGGTGGTGAGGAAGAGGCTGGGAGT
GATTGA
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Coding sequence (CDS) from alignment at ch2:1497102..1498257-

>KYF_001779-T1 ID=KYF_001779-T1|Name=KYF_001779-T1|organism=Aspergillus niger KYF3|type=CDS|length=3096bp|location=Sequence derived from alignment at ch2:1497102..1498257- (Aspergillus niger KYF3)
GGCCAACGATGCGGAGACCGCGATTGTACTGGACGATTGCACGATCACTG
CATGCGGAATTTCTTTCGTATGCAACAGGCTGAAAGCTGTCCTGTGTGCA
AGGCTGCGTGGCCGGGTGACAGATACGTTGGTGAGCGCGCGATTACTATG
TCTGATCCGGCAGCACAGAGGGCTAGACGGTCGGCTGCGAATACTCAGCA
GGCGGAAGCTGGGCCTAGTACGCAGTTCACGTTGCCTGAACTGGATGTTG
AAGATGAAGGGGATGGTGGTGAGGAAGAGGCTGGGAGTGATTGAACGACG
AACAAATCTCCCCAGAAGACATAACGGAAGACGACCTCCAAACCTACATC
GCCGCCGCCAACAGCGCCATATCCCCCTTCGATCTCGAAATCCGGAGCAT
AATACCCCAGATTGAAATCAACAACCACAATGACCCTCCCCCAGCTCCGG
AACGAGTCTACGCCCTCGTCAACACAACCAGCGACTCCCTCACTCAGCTC
GCAACAACATACTCCGCCGACGAAATCGCCTTCGTGAAGCGCATCCTCGA
CGCCATGTTCGACACATACAATACCCGCCGCCAGGAAGCAATGGTCATAA
GTAGTATGCAGGCATTGCAGCTGGCCAAGGCTGGTGCAGGGGACGCAAAT
AGACGGGAATCAGGAACACAGCAGCAAGCGACGCAGGGAGGCGCTGCACA
GTCGTTGACTATGACGCAGGCGGAGACGATGCTGAAGCAGCTTGTCGAGC
AGGGGTGGTTTGAGAAGAGCAGGAAGGGGTATTATCGGTTGAGTCCGCGC
GGGTTGATGGAGTTGAGGGGGTGGTTGGTAGCGGCGTATAATGATGAGGG
GATTAGGAAGATTAAGTTCTGTGCTGCGTGTAGGGATATCATTACTGCTA
TGCCCCGATACGCAGAAGACCACGACCGCTACGATGACAGCAACCGCGCA
TTTCTCCAAGCCTTCATGGCGCGGTCCACCATGACCTTTACACAAGCAAA
GCCCGTTCTGGCTGCTATATTCTCCATCCGAGGGCCAACGATGCGGAGAC
CGCGATTGTACTGGACGATTGCACGATCACTGCATGCGGAATTTCTTTCG
TATGCAACAGGCTGAAAGCTGTCCTGTGTGCAAGGCTGCGTGGCCGGGTG
ACAGATACGTTGGTGAGCGCGCGATTACTATGTCTGATCCGGCAGCACAG
AGGGCTAGACGGTCGGCTGCGAATACTCAGCAGGCGGAAGCTGGGCCTAG
TACGCAGTTCACGTTGCCTGAACTGGATGTTGAAGATGAAGGGGATGGTG
GTGAGGAAGAGGCTGGGAGTGATTGAACGACGAACAAATCTCCCCAGAAG
ACATAACGGAAGACGACCTCCAAACCTACATCGCCGCCGCCAACAGCGCC
ATATCCCCCTTCGATCTCGAAATCCGGAGCATAATACCCCAGATTGAAAT
CAACAACCACAATGACCCTCCCCCAGCTCCGGAACGAGTCTACGCCCTCG
TCAACACAACCAGCGACTCCCTCACTCAGCTCGCAACAACATACTCCGCC
GACGAAATCGCCTTCGTGAAGCGCATCCTCGACGCCATGTTCGACACATA
CAATACCCGCCGCCAGGAAGCAATGGTCATAAGTAGTATGCAGGCATTGC
AGCTGGCCAAGGCTGGTGCAGGGGACGCAAATAGACGGGAATCAGGAACA
CAGCAGCAAGCGACGCAGGGAGGCGCTGCACAGTCGTTGACTATGACGCA
GGCGGAGACGATGCTGAAGCAGCTTGTCGAGCAGGGGTGGTTTGAGAAGA
GCAGGAAGGGGTATTATCGGTTGAGTCCGCGCGGGTTGATGGAGTTGAGG
GGGTGGTTGGTAGCGGCGTATAATGATGAGGGGATTAGGAAGATTAAGTT
CTGTGCTGCGTGTAGGGATATCATTACTGCTATGCCCCGATACGCAGAAG
ACCACGACCGCTACGATGACAGCAACCGCGCATTTCTCCAAGCCTTCATG
GCGCGGTCCACCATGACCTTTACACAAGCAAAGCCCGTTCTGGCTGCTAT
ATTCTCCATCCGAGGGCCAACGATGCGGAGACCGCGATTGTACTGGACGA
TTGCACGATCACTGCATGCGGAATTTCTTTCGTATGCAACAGGCTGAAAG
CTGTCCTGTGTGCAAGGCTGCGTGGCCGGGTGACAGATACGTTGGTGAGC
GCGCGATTACTATGTCTGATCCGGCAGCACAGAGGGCTAGACGGTCGGCT
GCGAATACTCAGCAGGCGGAAGCTGGGCCTAGTACGCAGTTCACGTTGCC
TGAACTGGATGTTGAAGATGAAGGGGATGGTGGTGAGGAAGAGGCTGGGA
GTGATTGAACGACGAACAAATCTCCCCAGAAGACATAACGGAAGACGACC
TCCAAACCTACATCGCCGCCGCCAACAGCGCCATATCCCCCTTCGATCTC
GAAATCCGGAGCATAATACCCCAGATTGAAATCAACAACCACAATGACCC
TCCCCCAGCTCCGGAACGAGTCTACGCCCTCGTCAACACAACCAGCGACT
CCCTCACTCAGCTCGCAACAACATACTCCGCCGACGAAATCGCCTTCGTG
AAGCGCATCCTCGACGCCATGTTCGACACATACAATACCCGCCGCCAGGA
AGCAATGGTCATAAGTAGTATGCAGGCATTGCAGCTGGCCAAGGCTGGTG
CAGGGGACGCAAATAGACGGGAATCAGGAACACAGCAGCAAGCGACGCAG
GGAGGCGCTGCACAGTCGTTGACTATGACGCAGGCGGAGACGATGCTGAA
GCAGCTTGTCGAGCAGGGGTGGTTTGAGAAGAGCAGGAAGGGGTATTATC
GGTTGAGTCCGCGCGGGTTGATGGAGTTGAGGGGGTGGTTGGTAGCGGCG
TATAATGATGAGGGGATTAGGAAGATTAAGTTCTGTGCTGCGTGTAGGGA
TATCATTACTGCTATGCCCCGATACGCAGAAGACCACGACCGCTACGATG
ACAGCAACCGCGCATTTCTCCAAGCCTTCATGGCGCGGTCCACCATGACC
TTTACACAAGCAAAGCCCGTTCTGGCTGCTATATTCTCCATCCGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030915Smc5-Smc6 complex
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_001779KYF_001779Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_001779-T1KYF_001779-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001779-T1.cdsKYF_001779-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001779-T1.exon3KYF_001779-T1.exon3Aspergillus niger KYF3exon
KYF_001779-T1.exon2KYF_001779-T1.exon2Aspergillus niger KYF3exon
KYF_001779-T1.exon1KYF_001779-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG092645L9
DBxrefInterPro:IPR001841
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR014857
DBxrefInterPro:IPR011513
DBxrefInterPro:IPR036388
DBxrefPFAM:PF08746
DBxrefPFAM:PF07574
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1497102..1498257 -
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