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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1498780..1499488- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_001780-T1 ID=KYF_001780-T1|Name=KYF_001780-T1|organism=Aspergillus niger KYF3|type=mRNA|length=709bp|location=Sequence derived from alignment at ch2:1498780..1499488- (Aspergillus niger KYF3)
ATGGCCAACTATCTCGCCTCCATCTTCGGTACAGAGCAGGACAAGGTCAA
CTGCTCCTTCTACTACAAAATCGGAGCTTGCAGACATGGCGACCGCTGCT
CCCGAAAGCACGTTAAGCCGTCATACTCTCAGACGATCCTGATGCCGAAC
ATGTACCAGAATCCCGCGTACGACCCCAAGAGCAAGATGAACCCCAGTCA
GCTACAGAACCACTTTGATGCTTTCTACGAGGATGTGTGGTGCGAGATGT
GCAAGTACGGCGAGTTGGAGGAATTGGTTGTCTGCGATAACAACAATGAC
CGTGAGTCGCATCCATTCATATCCCTTCCCCGGATAGTGGTAAGATATAG
GCTAACATAGAGTTTCTTCTTCTCTAATAGACCTCATCGGAAATGTCTAC
GCGCGCTTCAAATACGAAGAAGATGCCCAGGCCGCCTGCGACGCTTTGAA
TTCACGGTGGTACGCGGCACGACCTATATATTGTGAATTATCACCGGTTA
CAGATTTCCGAGAAGCTTGTTGTCGGTTAAATAGCGGCGAGGGATGTGTA
CGTGGTGGATTCTGCAACTTCATTCATCGGAAGGACCCCAGCAATGAATT
GGATCGGGATCTTCGTCTCAGTACGAAGAAGTGGTTGAAGGAGCGTGGCA
GGGATGCGAGAAGTGTCAGCCGCAGTCCTAGTCCGGAGCCGACCCGGAGG
AGGTACTAG back to topCoding sequence (CDS) from alignment at ch2:1498780..1499488- >KYF_001780-T1 ID=KYF_001780-T1|Name=KYF_001780-T1|organism=Aspergillus niger KYF3|type=CDS|length=1260bp|location=Sequence derived from alignment at ch2:1498780..1499488- (Aspergillus niger KYF3)
ACCTCATCGGAAATGTCTACGCGCGCTTCAAATACGAAGAAGATGCCCAG
GCCGCCTGCGACGCTTTGAATTCACGGTGGTACGCGGCACGACCTATATA
TTGTGAATTATCACCGGTTACAGATTTCCGAGAAGCTTGTTGTCGGTTAA
ATAGCGGCGAGGGATGTGTACGTGGTGGATTCTGCAACTTCATTCATCGG
AAGGACCCCAGCAATGAATTGGATCGGGATCTTCGTCTCAGTACGAAGAA
GTGGTTGAAGGAGCGTGGCAGGGATGCGAGAAGTGTCAGCCGCAGTCCTA
GTCCGGAGCCGACCCGGAGGAGGTACTAGATGGCCAACTATCTCGCCTCC
ATCTTCGGTACAGAGCAGGACAAGGTCAACTGCTCCTTCTACTACAAAAT
CGGAGCTTGCAGACATGGCGACCGCTGCTCCCGAAAGCACGTTAAGCCGT
CATACTCTCAGACGATCCTGATGCCGAACATGTACCAGAATCCCGCGTAC
GACCCCAAGAGCAAGATGAACCCCAGTCAGCTACAGAACCACTTTGATGC
TTTCTACGAGGATGTGTGGTGCGAGATGTGCAAGTACGGCGAGTTGGAGG
AATTGGTTGTCTGCGATAACAACAATGACCACCTCATCGGAAATGTCTAC
GCGCGCTTCAAATACGAAGAAGATGCCCAGGCCGCCTGCGACGCTTTGAA
TTCACGGTGGTACGCGGCACGACCTATATATTGTGAATTATCACCGGTTA
CAGATTTCCGAGAAGCTTGTTGTCGGTTAAATAGCGGCGAGGGATGTGTA
CGTGGTGGATTCTGCAACTTCATTCATCGGAAGGACCCCAGCAATGAATT
GGATCGGGATCTTCGTCTCAGTACGAAGAAGTGGTTGAAGGAGCGTGGCA
GGGATGCGAGAAGTGTCAGCCGCAGTCCTAGTCCGGAGCCGACCCGGAGG
AGGTACTAGATGGCCAACTATCTCGCCTCCATCTTCGGTACAGAGCAGGA
CAAGGTCAACTGCTCCTTCTACTACAAAATCGGAGCTTGCAGACATGGCG
ACCGCTGCTCCCGAAAGCACGTTAAGCCGTCATACTCTCAGACGATCCTG
ATGCCGAACATGTACCAGAATCCCGCGTACGACCCCAAGAGCAAGATGAA
CCCCAGTCAGCTACAGAACCACTTTGATGCTTTCTACGAGGATGTGTGGT
GCGAGATGTGCAAGTACGGCGAGTTGGAGGAATTGGTTGTCTGCGATAAC
AACAATGACC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0089701 | U2AF complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000398 | mRNA splicing, via spliceosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0046872 | metal ion binding |
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.6 |
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR000504 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000571 |
| DBxref | InterPro:IPR009145 |
| DBxref | PFAM:PF00642 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1498780..1499488 - |
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