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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1565094..1566002+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_001804-T1 ID=KYF_001804-T1|Name=KYF_001804-T1|organism=Aspergillus niger KYF3|type=mRNA|length=909bp|location=Sequence derived from alignment at ch2:1565094..1566002+ (Aspergillus niger KYF3)
ATGCCCCCCAAATCCCATCCCGCAACAGCCAACGCCAACGTAGGAGACTT
GCCAGAGACAACCAACAAAGGAGAGGAGGAGATTCCAGCCTGTCAGTTCT
GTCGCAAGAAAAAAGCCAAGTGCAATCGAGCGCAGCCGTGTTCGCAATGT
ATGCGATCGGATGTTCTTTGCGTCTACGATGATCGACGGACGAAGCCCGG
TCTCCGAGCTGGGGCGGTCGACCAGCTCTATCGGCGCGTCGAGACGCTGG
AGAATATGTTTTTGGGTCAGGAGATGCTCTGGCAGCAGATGTGGAAGGCT
TTATTCCCGAACACTGAGCCCCCGCGATCCCTGGACAAGGGAACCACGGC
AGCCACGACCCTGACGGAGCGTCGGGAGCAGTTGAAGGCTTCATTACAGG
AGCCTCCACCCTTAGCAGCGAAGAGGTCACTTACAGTGGCAGACGCCGAC
AATTCTGCACCGCTGGACTGTGTTCCTCTCCCAGCCAAACGCGCCCGTGT
GGAGGACGAAGTGGCTCCCCATGCGGCTGTCCTAGAGCCCGAGCCTTTCT
TGGCCAACTCTTTACCTGACATCGTCTTGAACGAACTGGTGGATTTCTAC
TTTGTCAACATCCATCCGTGGATACCGATACTACACGTTAAGAGATTCCG
TGAGCGCATGCGATCGCCGGAGGAACGAGGGCATATCAATTGCATCTTAC
ATGCCATCATCTCTGTCTGTGCCCGCTTTTCACAAAATGGCCCAAATGGC
GATACGTTGAACTTAAAAGAGATCGCCAAGAAAAGTCGGCAAGAGGTAAT
ATTGCAAAGCACTGAAACCTTCTCCGTTGAGAATCTCCAAGCGCTAGTGA
TCGTCGCATTTGAGACAGTGAGCAAGAGGCCCACGCCATGGATATCCGGG
AACAAGTAG back to topCoding sequence (CDS) from alignment at ch2:1565094..1566002+ >KYF_001804-T1 ID=KYF_001804-T1|Name=KYF_001804-T1|organism=Aspergillus niger KYF3|type=CDS|length=909bp|location=Sequence derived from alignment at ch2:1565094..1566002+ (Aspergillus niger KYF3)
ATGCCCCCCAAATCCCATCCCGCAACAGCCAACGCCAACGTAGGAGACTT
GCCAGAGACAACCAACAAAGGAGAGGAGGAGATTCCAGCCTGTCAGTTCT
GTCGCAAGAAAAAAGCCAAGTGCAATCGAGCGCAGCCGTGTTCGCAATGT
ATGCGATCGGATGTTCTTTGCGTCTACGATGATCGACGGACGAAGCCCGG
TCTCCGAGCTGGGGCGGTCGACCAGCTCTATCGGCGCGTCGAGACGCTGG
AGAATATGTTTTTGGGTCAGGAGATGCTCTGGCAGCAGATGTGGAAGGCT
TTATTCCCGAACACTGAGCCCCCGCGATCCCTGGACAAGGGAACCACGGC
AGCCACGACCCTGACGGAGCGTCGGGAGCAGTTGAAGGCTTCATTACAGG
AGCCTCCACCCTTAGCAGCGAAGAGGTCACTTACAGTGGCAGACGCCGAC
AATTCTGCACCGCTGGACTGTGTTCCTCTCCCAGCCAAACGCGCCCGTGT
GGAGGACGAAGTGGCTCCCCATGCGGCTGTCCTAGAGCCCGAGCCTTTCT
TGGCCAACTCTTTACCTGACATCGTCTTGAACGAACTGGTGGATTTCTAC
TTTGTCAACATCCATCCGTGGATACCGATACTACACGTTAAGAGATTCCG
TGAGCGCATGCGATCGCCGGAGGAACGAGGGCATATCAATTGCATCTTAC
ATGCCATCATCTCTGTCTGTGCCCGCTTTTCACAAAATGGCCCAAATGGC
GATACGTTGAACTTAAAAGAGATCGCCAAGAAAAGTCGGCAAGAGGTAAT
ATTGCAAAGCACTGAAACCTTCTCCGTTGAGAATCTCCAAGCGCTAGTGA
TCGTCGCATTTGAGACAGTGAGCAAGAGGCCCACGCCATGGATATCCGGG
AACAAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.7 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1565094..1566002 + |
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