You are here

Home

KYF_001857-T1, KYF_001857-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_001857-T1
Unique NameKYF_001857-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1717044..1718193-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_001857-T1 ID=KYF_001857-T1|Name=KYF_001857-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1150bp|location=Sequence derived from alignment at ch2:1717044..1718193- (Aspergillus niger KYF3)
ATGGACGCCAAGGGACTCCACCGGTTTTCCCACTTTTCCTGTCGGACCCA
GCAGGTCGTCACCTCGTCCACCTGGGAGGGTTTGCTCATCGAGCAGTCCA
CCCTGTCTGCTGATACGAAAGGGTCAGAGCGGGATACGTGGTGGGTTGAC
ATCTGCGACGCCACTGAGGAGGAGGTCAGCACTGTCTGCCAGGCATTATC
GATCCATCCCCTGACGGCAGAGGACATCGCGACCCGGGAACCTCGCGAGA
AGATTGAGGCGTTTCGCAACTACTACCTAATATCTTTTCAAACCCTGCTT
CCAACAGACGACTTTAAGAGTTCTCGAAGCCTCAAGCCATCATCGTCCAT
CCCCGGCTCCGCGGGTTTCTATATACTGGTGTTCAAGAACGCCACGGTGA
CCTTTTCTCCCAGTGGATGTCACCACATCGCCCGAGTCCGGGACCGGATC
CGTCGGACTCAGGACACACATTTGGTGTCGAGTGATTGGATCTGCTACGC
TCTTATGTACGCCCGCTATTCCTTGTCCTGATCCTCCCAGACTCCAACTA
AAACCAAAATCCAGTGACGAAATTATCGATGATTTCGAACCGTACATGCG
CGCAGCAGAACGTGAAGCCGATGCGATCGAAGATCAAGTGTTCATCGCCC
GCGTCGACGACGTCAAAGCGCTCATTCCTCAACTTGATAGCCTCCGCAAG
AGTATCACTCAGCTCATCCGCTGCCTGACCGGCAAGTACGACGTCTTAAG
TGGCTTCGTCAAGCGTTGTCAGGCAAAAGACAGAAACCCAATGTTCCCGG
ACGGCGATCTCTTGGTGTATCTGGGCGACGTACAAGATCATCTCGTGACC
ACATTGACCAGTTTGTCCCATTTCGATGAAATTGTGGGCCGGTCACAGTC
GAACTTCCTGGCCCAGTTGAGCGTCAACAATATCCGGTTGAGTTATGACG
TGAATGCAGTCTTGAGTAAGGTGACTATCCTGGCGACAATCTTCGTACCC
TTGCACATGGTTACTGGGTTGTTTGGTATGAACGTCGAGGTGCCTGGACA
GAATGTGGATAATCTGGGATGGTTTTTTGGTATCGTAGGGTGTATGTGCG
CGTTTGTTATGGTTTGTTGCTTGCTTGCGAAGAGGCTGCGGTTGCTCTAG
back to top

Coding sequence (CDS) from alignment at ch2:1717044..1718193-

>KYF_001857-T1 ID=KYF_001857-T1|Name=KYF_001857-T1|organism=Aspergillus niger KYF3|type=CDS|length=2184bp|location=Sequence derived from alignment at ch2:1717044..1718193- (Aspergillus niger KYF3)
TGACGAAATTATCGATGATTTCGAACCGTACATGCGCGCAGCAGAACGTG
AAGCCGATGCGATCGAAGATCAAGTGTTCATCGCCCGCGTCGACGACGTC
AAAGCGCTCATTCCTCAACTTGATAGCCTCCGCAAGAGTATCACTCAGCT
CATCCGCTGCCTGACCGGCAAGTACGACGTCTTAAGTGGCTTCGTCAAGC
GTTGTCAGGCAAAAGACAGAAACCCAATGTTCCCGGACGGCGATCTCTTG
GTGTATCTGGGCGACGTACAAGATCATCTCGTGACCACATTGACCAGTTT
GTCCCATTTCGATGAAATTGTGGGCCGGTCACAGTCGAACTTCCTGGCCC
AGTTGAGCGTCAACAATATCCGGTTGAGTTATGACGTGAATGCAGTCTTG
AGTAAGGTGACTATCCTGGCGACAATCTTCGTACCCTTGCACATGGTTAC
TGGGTTGTTTGGTATGAACGTCGAGGTGCCTGGACAGAATGTGGATAATC
TGGGATGGTTTTTTGGTATCGTAGGGTGTATGTGCGCGTTTGTTATGGTT
TGTTGCTTGCTTGCGAAGAGGCTGCGGTTGCTCTAGATGGACGCCAAGGG
ACTCCACCGGTTTTCCCACTTTTCCTGTCGGACCCAGCAGGTCGTCACCT
CGTCCACCTGGGAGGGTTTGCTCATCGAGCAGTCCACCCTGTCTGCTGAT
ACGAAAGGGTCAGAGCGGGATACGTGGTGGGTTGACATCTGCGACGCCAC
TGAGGAGGAGGTCAGCACTGTCTGCCAGGCATTATCGATCCATCCCCTGA
CGGCAGAGGACATCGCGACCCGGGAACCTCGCGAGAAGATTGAGGCGTTT
CGCAACTACTACCTAATATCTTTTCAAACCCTGCTTCCAACAGACGACTT
TAAGAGTTCTCGAAGCCTCAAGCCATCATCGTCCATCCCCGGCTCCGCGG
GTTTCTATATACTGGTGTTCAAGAACGCCACGGTGACCTTTTCTCCCAGT
GGATGTCACCACATCGCCCGAGTCCGGGACCGGATCCGTCGGACTCAGGA
CACACATTTGGTGTCGAGTGATTGGATCTGCTACGCTCTTATTGACGAAA
TTATCGATGATTTCGAACCGTACATGCGCGCAGCAGAACGTGAAGCCGAT
GCGATCGAAGATCAAGTGTTCATCGCCCGCGTCGACGACGTCAAAGCGCT
CATTCCTCAACTTGATAGCCTCCGCAAGAGTATCACTCAGCTCATCCGCT
GCCTGACCGGCAAGTACGACGTCTTAAGTGGCTTCGTCAAGCGTTGTCAG
GCAAAAGACAGAAACCCAATGTTCCCGGACGGCGATCTCTTGGTGTATCT
GGGCGACGTACAAGATCATCTCGTGACCACATTGACCAGTTTGTCCCATT
TCGATGAAATTGTGGGCCGGTCACAGTCGAACTTCCTGGCCCAGTTGAGC
GTCAACAATATCCGGTTGAGTTATGACGTGAATGCAGTCTTGAGTAAGGT
GACTATCCTGGCGACAATCTTCGTACCCTTGCACATGGTTACTGGGTTGT
TTGGTATGAACGTCGAGGTGCCTGGACAGAATGTGGATAATCTGGGATGG
TTTTTTGGTATCGTAGGGTGTATGTGCGCGTTTGTTATGGTTTGTTGCTT
GCTTGCGAAGAGGCTGCGGTTGCTCTAGATGGACGCCAAGGGACTCCACC
GGTTTTCCCACTTTTCCTGTCGGACCCAGCAGGTCGTCACCTCGTCCACC
TGGGAGGGTTTGCTCATCGAGCAGTCCACCCTGTCTGCTGATACGAAAGG
GTCAGAGCGGGATACGTGGTGGGTTGACATCTGCGACGCCACTGAGGAGG
AGGTCAGCACTGTCTGCCAGGCATTATCGATCCATCCCCTGACGGCAGAG
GACATCGCGACCCGGGAACCTCGCGAGAAGATTGAGGCGTTTCGCAACTA
CTACCTAATATCTTTTCAAACCCTGCTTCCAACAGACGACTTTAAGAGTT
CTCGAAGCCTCAAGCCATCATCGTCCATCCCCGGCTCCGCGGGTTTCTAT
ATACTGGTGTTCAAGAACGCCACGGTGACCTTTTCTCCCAGTGGATGTCA
CCACATCGCCCGAGTCCGGGACCGGATCCGTCGGACTCAGGACACACATT
TGGTGTCGAGTGATTGGATCTGCTACGCTCTTAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0030001metal ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0046873metal ion transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_001857KYF_001857Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_001857-T1KYF_001857-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001857-T1.cdsKYF_001857-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001857-T1.exon2KYF_001857-T1.exon2Aspergillus niger KYF3exon
KYF_001857-T1.exon1KYF_001857-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR002523
DBxrefPFAM:PF01544
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1717044..1718193 -
Powered by Drupal