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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1742847..1745016- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_001869-T1 ID=KYF_001869-T1|Name=KYF_001869-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2170bp|location=Sequence derived from alignment at ch2:1742847..1745016- (Aspergillus niger KYF3)
ATGAAGCGCAAAGCTGCATTCCAGCTGCCTCATACCCCCCGACGCGCTCC
GCGGCAGGACCCCGTGTCTTGCGACTCTTGTCGGCTCAAGAAGATTAAAT
GCGATCGCCAGCAGCCATGCAGCAGTTGCTCTGCGCGCCGGTTGACATGC
CGTTATGGAAAGCCAGAAGCTGCAGGTACCGCAAGGGTTCAAAAACCACT
ATTAGCAGCTGGTGTGGAGCGGACATCCCCTCCCAGTAACCCAACTGTGC
CTCCAAGAGCCGATAACGTGCCTATTGAGCCCACTGCAGCTCCATTGCGG
GCGTGCAATCGGGAGTCGCTGCTCACAGCGGACTGGCTGGAGAACATTCA
CATGGCTGACCGGGTACCAACAGCAACCCCGAAATGGCTGCGAGATGGAT
TGGATGATCCAGTAAGAGGGCGCAACTTAAACTTAAGCCTAAACGATGAG
ACGGGTTCTGCAAGACCCCTACTGTCAATGCCATACATGAATCGATCCGC
TATCGATGAGAATCCGGCGTCGATCAATTTGATCACCTTTGTACCCGCGA
AATCGGAGGCTCTGGATCTCTTTCGATACTATCATCGTTACGTCGACTAT
CTCTACCATATCATCGTCCCAAAGCGTGTCGAGGGCCAGATAAATGGGAT
TTATCGTTGTATTGAAAGCAATGCGCCCGTGGATCTCAACCACTTGGCGC
TGCTTTTCGGCATTCTAGCCAGCTCTCTATGTCTACAACGATCAGTGGTG
GCATCTACTGATGCAGAAGCGCGCAGCCAAGAGTTTGCCTTTCTCACTGG
CGCTGCATTAATTCAAAGCCACTACTCTCTGTCTCCAACTCTTGTGGGCT
TGCAGGCAACCATGGTGGTCATGCATAATGTCTCTAACTGGAACATTCCA
CCATCCGTGAGCGGTCTCTTCGTACATGGTGCGATAGTCAGCCAAGCGAA
GAGTCTCATGCTGCACTGCATCGACTCCCCGCGCTTTCGGAATGAGAGAG
AGGGAAGTGATTACGATGCAATAGATCTTGAAGTCAAGAGACGACTATGG
TGGGATCTGACGTCTTTCGACTGGTAAGAGGTATTCGAGTGATGGATGGT
CATGGCTGATTAACAATTGCAGGCTACTGGGCTTTCTTACTGGCCCTCAA
GAGTGGACGTACCTCATCCAGCCGCACCACATGAACGTGAACCAGCCATT
GAATATCGATGATAATGCAATGTGCCACAACATGGTTTCAATGCCAAACT
CCACACCAACAGACATGTCCTTTTTCCTTCAACGCCTGACCCTAGCTGCT
GTGAGCCGGGAGGTAGTTGATGCAACATCCTACGAGCATCTCCATGGCTT
AGAGCCAATTTACGAAAAAATACTCGAGCTAGACAAAAAGTTCCATCGAG
CCGTGGCGGAGATTCCTGACTTCTTCCGCCTGGATCCATCATCCAGACGA
CGGTTTGCTTCGCTCTACGAAGAGCGTCCGACCATTGCCTGGCAAGGCTG
TCTCCTACAACAAGGCTTCTTCTCCCGCTTATGCCGTCTGCATCGAGATT
TCTTCATCAGAGGAGCTCGTGAACCAGCATATTCCTATTCCCACGTGATC
TGCCTGCAGTCTGCCCGGAAAGTGCTCGAGATTAAAAGAATCATGGATGG
AAACGAACCGAACTACACCCCACCGAACTCTGTCGTCTGGTCCGTAATGC
ATCATGTATTCGCTGCTGCTGTGATATTATTACTGGACGTGTGCTTCAAT
TGGGATGATATTCTAGCCGAGAAGCGAAAAGAAGAAGTGCTGGATGCCTG
CCGCATGCTGAGCAAGGCACAAGAGTCGTCTGCCCTGGTCAGGGAAGGAA
TCAACGCAATGATGGGTGTGTTGCAAAAGCATTGGAGAACCGGAAAGCAG
GCTGAAAATCACACTATTATTTCACAAGGGGCGGATGGAGCGCGATCTCA
TCCTGGCTCTGCACCGGCTCATGTCCCAGCTCTCAATGCTGAATCAAACG
TCATGCCGCCACACCTCCCAGCTGCCACCAATGACAATGCACCTCATGAG
AGGCAGCTGGAAGATATCTGGACCGAGATGCTTGAGACGGGTAACGACCT
GGCTCTGGATTCTGCAGACTGGACGGAACTGTTGAATGAGCTGACAGACC
CGGAGCTATCTCGAGGATGA back to topCoding sequence (CDS) from alignment at ch2:1742847..1745016- >KYF_001869-T1 ID=KYF_001869-T1|Name=KYF_001869-T1|organism=Aspergillus niger KYF3|type=CDS|length=4242bp|location=Sequence derived from alignment at ch2:1742847..1745016- (Aspergillus niger KYF3)
GCTACTGGGCTTTCTTACTGGCCCTCAAGAGTGGACGTACCTCATCCAGC
CGCACCACATGAACGTGAACCAGCCATTGAATATCGATGATAATGCAATG
TGCCACAACATGGTTTCAATGCCAAACTCCACACCAACAGACATGTCCTT
TTTCCTTCAACGCCTGACCCTAGCTGCTGTGAGCCGGGAGGTAGTTGATG
CAACATCCTACGAGCATCTCCATGGCTTAGAGCCAATTTACGAAAAAATA
CTCGAGCTAGACAAAAAGTTCCATCGAGCCGTGGCGGAGATTCCTGACTT
CTTCCGCCTGGATCCATCATCCAGACGACGGTTTGCTTCGCTCTACGAAG
AGCGTCCGACCATTGCCTGGCAAGGCTGTCTCCTACAACAAGGCTTCTTC
TCCCGCTTATGCCGTCTGCATCGAGATTTCTTCATCAGAGGAGCTCGTGA
ACCAGCATATTCCTATTCCCACGTGATCTGCCTGCAGTCTGCCCGGAAAG
TGCTCGAGATTAAAAGAATCATGGATGGAAACGAACCGAACTACACCCCA
CCGAACTCTGTCGTCTGGTCCGTAATGCATCATGTATTCGCTGCTGCTGT
GATATTATTACTGGACGTGTGCTTCAATTGGGATGATATTCTAGCCGAGA
AGCGAAAAGAAGAAGTGCTGGATGCCTGCCGCATGCTGAGCAAGGCACAA
GAGTCGTCTGCCCTGGTCAGGGAAGGAATCAACGCAATGATGGGTGTGTT
GCAAAAGCATTGGAGAACCGGAAAGCAGGCTGAAAATCACACTATTATTT
CACAAGGGGCGGATGGAGCGCGATCTCATCCTGGCTCTGCACCGGCTCAT
GTCCCAGCTCTCAATGCTGAATCAAACGTCATGCCGCCACACCTCCCAGC
TGCCACCAATGACAATGCACCTCATGAGAGGCAGCTGGAAGATATCTGGA
CCGAGATGCTTGAGACGGGTAACGACCTGGCTCTGGATTCTGCAGACTGG
ACGGAACTGTTGAATGAGCTGACAGACCCGGAGCTATCTCGAGGATGAAT
GAAGCGCAAAGCTGCATTCCAGCTGCCTCATACCCCCCGACGCGCTCCGC
GGCAGGACCCCGTGTCTTGCGACTCTTGTCGGCTCAAGAAGATTAAATGC
GATCGCCAGCAGCCATGCAGCAGTTGCTCTGCGCGCCGGTTGACATGCCG
TTATGGAAAGCCAGAAGCTGCAGGTACCGCAAGGGTTCAAAAACCACTAT
TAGCAGCTGGTGTGGAGCGGACATCCCCTCCCAGTAACCCAACTGTGCCT
CCAAGAGCCGATAACGTGCCTATTGAGCCCACTGCAGCTCCATTGCGGGC
GTGCAATCGGGAGTCGCTGCTCACAGCGGACTGGCTGGAGAACATTCACA
TGGCTGACCGGGTACCAACAGCAACCCCGAAATGGCTGCGAGATGGATTG
GATGATCCAGTAAGAGGGCGCAACTTAAACTTAAGCCTAAACGATGAGAC
GGGTTCTGCAAGACCCCTACTGTCAATGCCATACATGAATCGATCCGCTA
TCGATGAGAATCCGGCGTCGATCAATTTGATCACCTTTGTACCCGCGAAA
TCGGAGGCTCTGGATCTCTTTCGATACTATCATCGTTACGTCGACTATCT
CTACCATATCATCGTCCCAAAGCGTGTCGAGGGCCAGATAAATGGGATTT
ATCGTTGTATTGAAAGCAATGCGCCCGTGGATCTCAACCACTTGGCGCTG
CTTTTCGGCATTCTAGCCAGCTCTCTATGTCTACAACGATCAGTGGTGGC
ATCTACTGATGCAGAAGCGCGCAGCCAAGAGTTTGCCTTTCTCACTGGCG
CTGCATTAATTCAAAGCCACTACTCTCTGTCTCCAACTCTTGTGGGCTTG
CAGGCAACCATGGTGGTCATGCATAATGTCTCTAACTGGAACATTCCACC
ATCCGTGAGCGGTCTCTTCGTACATGGTGCGATAGTCAGCCAAGCGAAGA
GTCTCATGCTGCACTGCATCGACTCCCCGCGCTTTCGGAATGAGAGAGAG
GGAAGTGATTACGATGCAATAGATCTTGAAGTCAAGAGACGACTATGGTG
GGATCTGACGTCTTTCGACTGGCTACTGGGCTTTCTTACTGGCCCTCAAG
AGTGGACGTACCTCATCCAGCCGCACCACATGAACGTGAACCAGCCATTG
AATATCGATGATAATGCAATGTGCCACAACATGGTTTCAATGCCAAACTC
CACACCAACAGACATGTCCTTTTTCCTTCAACGCCTGACCCTAGCTGCTG
TGAGCCGGGAGGTAGTTGATGCAACATCCTACGAGCATCTCCATGGCTTA
GAGCCAATTTACGAAAAAATACTCGAGCTAGACAAAAAGTTCCATCGAGC
CGTGGCGGAGATTCCTGACTTCTTCCGCCTGGATCCATCATCCAGACGAC
GGTTTGCTTCGCTCTACGAAGAGCGTCCGACCATTGCCTGGCAAGGCTGT
CTCCTACAACAAGGCTTCTTCTCCCGCTTATGCCGTCTGCATCGAGATTT
CTTCATCAGAGGAGCTCGTGAACCAGCATATTCCTATTCCCACGTGATCT
GCCTGCAGTCTGCCCGGAAAGTGCTCGAGATTAAAAGAATCATGGATGGA
AACGAACCGAACTACACCCCACCGAACTCTGTCGTCTGGTCCGTAATGCA
TCATGTATTCGCTGCTGCTGTGATATTATTACTGGACGTGTGCTTCAATT
GGGATGATATTCTAGCCGAGAAGCGAAAAGAAGAAGTGCTGGATGCCTGC
CGCATGCTGAGCAAGGCACAAGAGTCGTCTGCCCTGGTCAGGGAAGGAAT
CAACGCAATGATGGGTGTGTTGCAAAAGCATTGGAGAACCGGAAAGCAGG
CTGAAAATCACACTATTATTTCACAAGGGGCGGATGGAGCGCGATCTCAT
CCTGGCTCTGCACCGGCTCATGTCCCAGCTCTCAATGCTGAATCAAACGT
CATGCCGCCACACCTCCCAGCTGCCACCAATGACAATGCACCTCATGAGA
GGCAGCTGGAAGATATCTGGACCGAGATGCTTGAGACGGGTAACGACCTG
GCTCTGGATTCTGCAGACTGGACGGAACTGTTGAATGAGCTGACAGACCC
GGAGCTATCTCGAGGATGAATGAAGCGCAAAGCTGCATTCCAGCTGCCTC
ATACCCCCCGACGCGCTCCGCGGCAGGACCCCGTGTCTTGCGACTCTTGT
CGGCTCAAGAAGATTAAATGCGATCGCCAGCAGCCATGCAGCAGTTGCTC
TGCGCGCCGGTTGACATGCCGTTATGGAAAGCCAGAAGCTGCAGGTACCG
CAAGGGTTCAAAAACCACTATTAGCAGCTGGTGTGGAGCGGACATCCCCT
CCCAGTAACCCAACTGTGCCTCCAAGAGCCGATAACGTGCCTATTGAGCC
CACTGCAGCTCCATTGCGGGCGTGCAATCGGGAGTCGCTGCTCACAGCGG
ACTGGCTGGAGAACATTCACATGGCTGACCGGGTACCAACAGCAACCCCG
AAATGGCTGCGAGATGGATTGGATGATCCAGTAAGAGGGCGCAACTTAAA
CTTAAGCCTAAACGATGAGACGGGTTCTGCAAGACCCCTACTGTCAATGC
CATACATGAATCGATCCGCTATCGATGAGAATCCGGCGTCGATCAATTTG
ATCACCTTTGTACCCGCGAAATCGGAGGCTCTGGATCTCTTTCGATACTA
TCATCGTTACGTCGACTATCTCTACCATATCATCGTCCCAAAGCGTGTCG
AGGGCCAGATAAATGGGATTTATCGTTGTATTGAAAGCAATGCGCCCGTG
GATCTCAACCACTTGGCGCTGCTTTTCGGCATTCTAGCCAGCTCTCTATG
TCTACAACGATCAGTGGTGGCATCTACTGATGCAGAAGCGCGCAGCCAAG
AGTTTGCCTTTCTCACTGGCGCTGCATTAATTCAAAGCCACTACTCTCTG
TCTCCAACTCTTGTGGGCTTGCAGGCAACCATGGTGGTCATGCATAATGT
CTCTAACTGGAACATTCCACCATCCGTGAGCGGTCTCTTCGTACATGGTG
CGATAGTCAGCCAAGCGAAGAGTCTCATGCTGCACTGCATCGACTCCCCG
CGCTTTCGGAATGAGAGAGAGGGAAGTGATTACGATGCAATAGATCTTGA
AGTCAAGAGACGACTATGGTGGGATCTGACGTCTTTCGACTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1742847..1745016 - |
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