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KYF_001931-T1, KYF_001931-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_001931-T1
Unique NameKYF_001931-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1937338..1938171-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_001931-T1 ID=KYF_001931-T1|Name=KYF_001931-T1|organism=Aspergillus niger KYF3|type=mRNA|length=834bp|location=Sequence derived from alignment at ch2:1937338..1938171- (Aspergillus niger KYF3)
ATGGCTGACGAGGTAGGTGTTAACTCTCCTTCTGCGAACTTCCCGGTCTA
CTCAGTTGCGGCCTATCTTTGTCCTGCTTGCTCGGTTGGGTTGGGTGTCT
TCGGGGCCTCGCATCTCGATCGCTGCCCCCCACCCAACCCCCCTCGTTCC
TGCAGACATTGCATATTTTGCTACACTCGCCGACCATCTGCTATAATTTT
AATCATGGGCTAGTTCGCTAATGTTCACCTTTAACAGCACCACGAGACCT
TCGAGTCCGCCGACGCCGGCGCCTCGGCCACCTTCCCCATGCAGTGCTCT
GCCCTGCGCAAGAACGGTCACGTTGTCATCAAGGGCCGCCCCTGCAAGAT
CGTTGAGATGTCCACCTCCAAGACTGGCAAGCACGGTCACGCCAAGGTCC
ACATCGTTGCCATCGATATCTTCACTGGCAAGAAGCTTGAGGATCTGTCC
CCCTCCACCCACAACATGGACGTCCCCAACGTCTACCGCAAGGAATACCA
GCTCGTGAGTAGTTTGGAACATGAACGGTCTTGGTGATCTTGACTCGCTA
ACACGGCTATAGCTTGACGTTACTGACGACGACTTCCTTTCCCTGATGGA
CGAGAACGGTAACACCAAGGACGACGTCAAGGTCCCCGAAGGTGAGGTGG
GCGACCGTATCCGCCGCATGTTCCACGATGAGGAGAAGGACTGCAGTGAG
TAACACCCGTCCATTTTGGCTAGGTGGCTGTTGGCAAGATTACTGACGAA
ATTTCCTTTTCAGACGTCACCATCCTGTCCTCCATGGGTGAGCAGGTCTG
CATGGATGTCAAGGAGGCTCCCAAGGGCAACTAA
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Coding sequence (CDS) from alignment at ch2:1937338..1938171-

>KYF_001931-T1 ID=KYF_001931-T1|Name=KYF_001931-T1|organism=Aspergillus niger KYF3|type=CDS|length=1932bp|location=Sequence derived from alignment at ch2:1937338..1938171- (Aspergillus niger KYF3)
ACGTCACCATCCTGTCCTCCATGGGTGAGCAGGTCTGCATGGATGTCAAG
GAGGCTCCCAAGGGCAACTAACTTGACGTTACTGACGACGACTTCCTTTC
CCTGATGGACGAGAACGGTAACACCAAGGACGACGTCAAGGTCCCCGAAG
GTGAGGTGGGCGACCGTATCCGCCGCATGTTCCACGATGAGGAGAAGGAC
TGCACACCACGAGACCTTCGAGTCCGCCGACGCCGGCGCCTCGGCCACCT
TCCCCATGCAGTGCTCTGCCCTGCGCAAGAACGGTCACGTTGTCATCAAG
GGCCGCCCCTGCAAGATCGTTGAGATGTCCACCTCCAAGACTGGCAAGCA
CGGTCACGCCAAGGTCCACATCGTTGCCATCGATATCTTCACTGGCAAGA
AGCTTGAGGATCTGTCCCCCTCCACCCACAACATGGACGTCCCCAACGTC
TACCGCAAGGAATACCAGCTCATGGCTGACGAGACGTCACCATCCTGTCC
TCCATGGGTGAGCAGGTCTGCATGGATGTCAAGGAGGCTCCCAAGGGCAA
CTAACTTGACGTTACTGACGACGACTTCCTTTCCCTGATGGACGAGAACG
GTAACACCAAGGACGACGTCAAGGTCCCCGAAGGTGAGGTGGGCGACCGT
ATCCGCCGCATGTTCCACGATGAGGAGAAGGACTGCACACCACGAGACCT
TCGAGTCCGCCGACGCCGGCGCCTCGGCCACCTTCCCCATGCAGTGCTCT
GCCCTGCGCAAGAACGGTCACGTTGTCATCAAGGGCCGCCCCTGCAAGAT
CGTTGAGATGTCCACCTCCAAGACTGGCAAGCACGGTCACGCCAAGGTCC
ACATCGTTGCCATCGATATCTTCACTGGCAAGAAGCTTGAGGATCTGTCC
CCCTCCACCCACAACATGGACGTCCCCAACGTCTACCGCAAGGAATACCA
GCTCATGGCTGACGAGACGTCACCATCCTGTCCTCCATGGGTGAGCAGGT
CTGCATGGATGTCAAGGAGGCTCCCAAGGGCAACTAACTTGACGTTACTG
ACGACGACTTCCTTTCCCTGATGGACGAGAACGGTAACACCAAGGACGAC
GTCAAGGTCCCCGAAGGTGAGGTGGGCGACCGTATCCGCCGCATGTTCCA
CGATGAGGAGAAGGACTGCACACCACGAGACCTTCGAGTCCGCCGACGCC
GGCGCCTCGGCCACCTTCCCCATGCAGTGCTCTGCCCTGCGCAAGAACGG
TCACGTTGTCATCAAGGGCCGCCCCTGCAAGATCGTTGAGATGTCCACCT
CCAAGACTGGCAAGCACGGTCACGCCAAGGTCCACATCGTTGCCATCGAT
ATCTTCACTGGCAAGAAGCTTGAGGATCTGTCCCCCTCCACCCACAACAT
GGACGTCCCCAACGTCTACCGCAAGGAATACCAGCTCATGGCTGACGAGA
CGTCACCATCCTGTCCTCCATGGGTGAGCAGGTCTGCATGGATGTCAAGG
AGGCTCCCAAGGGCAACTAACTTGACGTTACTGACGACGACTTCCTTTCC
CTGATGGACGAGAACGGTAACACCAAGGACGACGTCAAGGTCCCCGAAGG
TGAGGTGGGCGACCGTATCCGCCGCATGTTCCACGATGAGGAGAAGGACT
GCACACCACGAGACCTTCGAGTCCGCCGACGCCGGCGCCTCGGCCACCTT
CCCCATGCAGTGCTCTGCCCTGCGCAAGAACGGTCACGTTGTCATCAAGG
GCCGCCCCTGCAAGATCGTTGAGATGTCCACCTCCAAGACTGGCAAGCAC
GGTCACGCCAAGGTCCACATCGTTGCCATCGATATCTTCACTGGCAAGAA
GCTTGAGGATCTGTCCCCCTCCACCCACAACATGGACGTCCCCAACGTCT
ACCGCAAGGAATACCAGCTCATGGCTGACGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0045905positive regulation of translational termination
GO:0045901positive regulation of translational elongation
GO:0006452translational frameshifting
Vocabulary: Molecular Function
TermDefinition
GO:0003746translation elongation factor activity
GO:0003723RNA binding
GO:0043022ribosome binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ANB1KYF_001931Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_001931-T1KYF_001931-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001931-T1.cdsKYF_001931-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_001931-T1.exon4KYF_001931-T1.exon4Aspergillus niger KYF3exon
KYF_001931-T1.exon3KYF_001931-T1.exon3Aspergillus niger KYF3exon
KYF_001931-T1.exon2KYF_001931-T1.exon2Aspergillus niger KYF3exon
KYF_001931-T1.exon1KYF_001931-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR008991
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR019769
DBxrefInterPro:IPR014722
DBxrefInterPro:IPR001884
DBxrefInterPro:IPR020189
DBxrefPFAM:PF01287
Producttranslation initiation factor eIF5A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1937338..1938171 -
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