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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2282399..2283152+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_002047-T1 ID=KYF_002047-T1|Name=KYF_002047-T1|organism=Aspergillus niger KYF3|type=mRNA|length=754bp|location=Sequence derived from alignment at ch2:2282399..2283152+ (Aspergillus niger KYF3)
ATGTCTGACTACGGAGACCACGACGCTGAGGAAACGTAAGAGACCGGTAC
CCCATGAGAGCTTGAGCTTGCGCAGGTCAATGCTGCGCGTCTGCGTTACA
TATCGATGGCCGTCATTTTTGCTAGGTGGAAATTCCGATGTTCTGACTAG
GATTGTCTTATAGTTACGACTACGAGCCGGAGCAGGAGTACGATGACAAC
GAGCCCGAGGACTTCTTAAACCCCGAGGATGTCGACGTCGCAGAAGGAGG
AGCCGATGAATATGGCGAAGGCTCATACGCGCCTGCTGTCAACGGAAACC
ACATTGTCGCTTCAGGCGACCCGAATGCGGGGTATGCGGGCAAGGTCATG
GAACAGACACGGGAGAAGAAGGTCCCGAACGACCAGCGCCAGACAACTCC
ATACATGACCAAGTACGAGCGCGCGCGTGTCCTGGGTACTCGGGCGCTGC
AGATCAGGTTCGTCTCGGCAATCGATGCAGCATCAAGCATGGGCTGAGGA
GCGCAATCGGATGCTGACCATGTTTTTAGTATGAACGCCCCGGTGCTCGT
CGATCTTGAGGGCGAGACGGATCCTCTACAGATCGCCATCAAGGAGTTGA
ACCAGAAGAAGATCCCACTGATTGTGCGGAGATATCTTCCCGACGGATGG
TAAGCGGACCTTCTCCATGTGTGTTTAACGATTTGACGTATTCGATCTAA
TCACTATTTCTGTGGTACAGGTACGAGGACTGGACTTGCGAAGAATTACT
CTAG back to topCoding sequence (CDS) from alignment at ch2:2282399..2283152+ >KYF_002047-T1 ID=KYF_002047-T1|Name=KYF_002047-T1|organism=Aspergillus niger KYF3|type=CDS|length=1932bp|location=Sequence derived from alignment at ch2:2282399..2283152+ (Aspergillus niger KYF3)
ATGTCTGACTACGGAGACCACGACGCTGAGGAAACTTACGACTACGAGCC
GGAGCAGGAGTACGATGACAACGAGCCCGAGGACTTCTTAAACCCCGAGG
ATGTCGACGTCGCAGAAGGAGGAGCCGATGAATATGGCGAAGGCTCATAC
GCGCCTGCTGTCAACGGAAACCACATTGTCGCTTCAGGCGACCCGAATGC
GGGGTATGCGGGCAAGGTCATGGAACAGACACGGGAGAAGAAGGTCCCGA
ACGACCAGCGCCAGACAACTCCATACATGACCAAGTACGAGCGCGCGCGT
GTCCTGGGTACTCGGGCGCTGCAGATCAGTATGAACGCCCCGGTGCTCGT
CGATCTTGAGGGCGAGACGGATCCTCTACAGATCGCCATCAAGGAGTTGA
ACCAGAAGAAGATCCCACTGATTGTGCGGAGATATCTTCCCGACGGATGG
TACGAGGACTGGACTTGCGAAGAATTACTCTAGATGTCTGACTACGGAGA
CCACGACGCTGAGGAAACTTACGACTACGAGCCGGAGCAGGAGTACGATG
ACAACGAGCCCGAGGACTTCTTAAACCCCGAGGATGTCGACGTCGCAGAA
GGAGGAGCCGATGAATATGGCGAAGGCTCATACGCGCCTGCTGTCAACGG
AAACCACATTGTCGCTTCAGGCGACCCGAATGCGGGGTATGCGGGCAAGG
TCATGGAACAGACACGGGAGAAGAAGGTCCCGAACGACCAGCGCCAGACA
ACTCCATACATGACCAAGTACGAGCGCGCGCGTGTCCTGGGTACTCGGGC
GCTGCAGATCAGTATGAACGCCCCGGTGCTCGTCGATCTTGAGGGCGAGA
CGGATCCTCTACAGATCGCCATCAAGGAGTTGAACCAGAAGAAGATCCCA
CTGATTGTGCGGAGATATCTTCCCGACGGATGGTACGAGGACTGGACTTG
CGAAGAATTACTCTAGATGTCTGACTACGGAGACCACGACGCTGAGGAAA
CTTACGACTACGAGCCGGAGCAGGAGTACGATGACAACGAGCCCGAGGAC
TTCTTAAACCCCGAGGATGTCGACGTCGCAGAAGGAGGAGCCGATGAATA
TGGCGAAGGCTCATACGCGCCTGCTGTCAACGGAAACCACATTGTCGCTT
CAGGCGACCCGAATGCGGGGTATGCGGGCAAGGTCATGGAACAGACACGG
GAGAAGAAGGTCCCGAACGACCAGCGCCAGACAACTCCATACATGACCAA
GTACGAGCGCGCGCGTGTCCTGGGTACTCGGGCGCTGCAGATCAGTATGA
ACGCCCCGGTGCTCGTCGATCTTGAGGGCGAGACGGATCCTCTACAGATC
GCCATCAAGGAGTTGAACCAGAAGAAGATCCCACTGATTGTGCGGAGATA
TCTTCCCGACGGATGGTACGAGGACTGGACTTGCGAAGAATTACTCTAGA
TGTCTGACTACGGAGACCACGACGCTGAGGAAACTTACGACTACGAGCCG
GAGCAGGAGTACGATGACAACGAGCCCGAGGACTTCTTAAACCCCGAGGA
TGTCGACGTCGCAGAAGGAGGAGCCGATGAATATGGCGAAGGCTCATACG
CGCCTGCTGTCAACGGAAACCACATTGTCGCTTCAGGCGACCCGAATGCG
GGGTATGCGGGCAAGGTCATGGAACAGACACGGGAGAAGAAGGTCCCGAA
CGACCAGCGCCAGACAACTCCATACATGACCAAGTACGAGCGCGCGCGTG
TCCTGGGTACTCGGGCGCTGCAGATCAGTATGAACGCCCCGGTGCTCGTC
GATCTTGAGGGCGAGACGGATCCTCTACAGATCGCCATCAAGGAGTTGAA
CCAGAAGAAGATCCCACTGATTGTGCGGAGATATCTTCCCGACGGATGGT
ACGAGGACTGGACTTGCGAAGAATTACTCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003899 | DNA-directed 5'-3' RNA polymerase activity |
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265552 |
| DBxref | InterPro:IPR036161 |
| DBxref | InterPro:IPR006111 |
| DBxref | InterPro:IPR020708 |
| DBxref | InterPro:IPR012293 |
| DBxref | InterPro:IPR006110 |
| DBxref | PFAM:PF01192 |
| Product | and III |
| Product | II |
| Product | subunit common to RNA polymerases I |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2282399..2283152 + |
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