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KYF_002101-T1, KYF_002101-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_002101-T1
Unique NameKYF_002101-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2495408..2498104-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_002101-T1 ID=KYF_002101-T1|Name=KYF_002101-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2697bp|location=Sequence derived from alignment at ch2:2495408..2498104- (Aspergillus niger KYF3)
ATGACGGACCCTGTTGTCTTGCAGTCGGCGGTGCGAGTGCCTACTCCGCC
CCCAGGCACTTCCTACTCTCCTCAGGCCTCGGGTTCCCGCAAACGCTCAC
CTCCCTCTCGGTCTCCTTCGCCGAATCGTCGTCGCTCGCCCCCGGGTGAT
TCACTAAAAGACGGTGCGGATGCACCGCGCATCGATCCTGAACGCGCGAT
TGAAAGAGAGCGACAGCTCGCCGAGCGCCTTCGCCAACATGAGAAGCAGG
AGGCTGCTCGAAAGCCAATGACGGAGGAGGAAAAGCAGGCTGCGGCTAAA
GCAGAATATGAGAAGCTTTTGAACATGCGATCGGGTGGTACCTATATTCC
TCCTGCGCGACTACGGGCGCTGCAGGCGCAGATTACGGACAAGACCAGCA
AGGAGTACCAGCGGATGGCATGGGAGGCTCTTAAGAAGTCGATCAACGGT
CTCATCAACAAGGTCAACGTTTCCAACATCAAGTTTATCGTCCCGGAGCT
TTTTGGGGAGAACTTGGTGCGCGGTCGCGGTCTGTTTTGCAGAAGTATCA
TGAAAGCTCAGGCGGCCAGTTTGCCCTTCACACCTATCTACGCCGCCATG
GCGGCTATTGTGAACACCAAACTGCCCCAAGTCGGCGAGCTGTTGCTCAA
CCGTCTCATTGTCCAGTTCCGAAAGGCGTTCAAGAGAAACGACAAGGCAG
TCTGCATATCTTCCACGACCTTCATTGCCCATCTGTGCAACCAGCAGGTC
GCGCACGAGATGCTGGCCGCGCAGATTCTTCTTTTGCTGCTTCACAAGCC
CACGGATGACAGTGTCGAGATTGCTGTCGGCCTGACTCGAGAGGTTGGTC
AGCATCTGGAGGAGATGAGCGGTCCTATTGCCCTGGCGGTGTTTGATCAA
TTCCGAAATATCCTTCACGAAGCCGACATCGACAAGCGAGTACAGTATAT
GATTGAGGTGTTGTTCCAGGTCCGGAAAGATAGGTATAAGGACAACCCGG
CGATCAAGGAAGAATTGGACCTGATCGAGGAGGAAGACCAAATAACGCAT
CAGATCGGACTCGATGACGAGATTGAGACACAAGATTCCCTCAATATCTT
CAAGTACGATGCCGAATGGGAGGAGCACGAAGAGGCCTACAAGAAATTGA
AGGCAGAGATTCTGGGTGAAGGAAGTGATGACGAGGAGGACGACGAAGAC
GAGTCAGACGAGAGCTCCGATGAAGAGTCGGAGGAAGAGCGGAAGATGGA
CATTAAAGACCAGACCAACACAGACCTCGTGAACCTGCGGAGGACGATAT
ACCTGACGATCATGTCGAGTATCGATTTCGAAGAATGCTGTCACAAGCTG
ATGAAGATCTCGCTGCCCGCTGGCCTCGAGCCCGAGCTCCCGTCAATGAT
CATCGAGTGTTGCTCCCAGGAGCGCACGTATTCGAAGTTCTACGGCTTGA
TCGGAGAGCGCTTCGCAAAGATCAACCGGCTCTGGTCCGATCTCTTCGAA
GCTGCATTTGCCAAGTACTACGACACCATCCATCGCTACGAGACAAACCG
ACTCCGCAATATTGCCCGCTTCTTCGGCCATATGATTAGCAATGACGCGA
TTGGCTGGCATGTCATGTCGATCATCCACATGAACGAGGAGGAGACGACA
TCAAGCAGCCGTATCTTCATCAAGATCCTCTTCCAAGACCTCGGAGAACA
CCTGGGCCTGCCCAAACTGCAGGAACGCATGCGGGACGAGATCCTGCGTC
CCAGCTTCGAGGGCCTCTTCCCACTGGACAATCCCCGCAACACGCGCTTC
TCAATCAACTACTTCACCAGTATCGGCATGGGTATGCTGACGGAGGACAT
GCGCGAGCACCTAAAAAACCTCCCCAAGCCCACGATGCCTGCATTGCCCC
AACGCGATGCCGGCGCCGACTCCGACTCCGAGTCCGTGGTATCTCACCCA
ACCAGCTGCTCAACCTGTACTCCTCGCTCTCGCTCCCGCTCCCGCTCCTA
CTCCTACTCCCGCTCTCCTTCCCCCGGCCGTGGCCGCAGACGCTCCGTCA
GCCGCGGCCGATCCTACAGCCGCTCCGTGTCCGGATCCTCACGCCGCAGC
TACAGCTACACCCCTTCGCGGTCCAGGTCCCGATCCCCGGCGCCCAAATC
CCGCCGACGCCCCGTCTCATACAGTCGATCCCCCCGCAGAAGATCCTCCG
TGTCCCCAACACCCCCTCCTCGCCGGACACGCGATCGCTCCTACGATTCC
CGCTCTCCCAGACGCTCGCTCTCCCGGTCCGTCACCCCTCCGCCTCGCAG
CAAGCGAGATACCCACGCCCGCCGAGACAGAAGCTACTCCAGATCCGTCT
CCCGATCTGTCTCCCCTCCTCCACGTCAGGCTGCCGGAGGTGCCGCTCGG
TACTCGGAGTCTCCTCCTCCCCGCCGGCGGGTCGAAAGGAGCGTCTCCGC
GTCTCGCTCTCCTTCCCGTTCTCGTTCTCGTACTCCGGAGCGTCGTGCCC
CGCCTGGTCGTCGTGCCCCCCGTGATGCTTCAGTCTCGCGCTCGCGCTCC
CCTACCCCGCCGCGCGGTGGTGGTCGTCGTGGCGATGCTCCCCCTCGTCG
TCGTCGCTACTCTGACTCGTTGTCTCCGTCGCGGTCTCCGCCGCCGAGAC
GGCACAGGTCTCCGTCTAGAACGCCTCCCCGTCGGGTGCGCGATTAG
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Coding sequence (CDS) from alignment at ch2:2495408..2498104-

>KYF_002101-T1 ID=KYF_002101-T1|Name=KYF_002101-T1|organism=Aspergillus niger KYF3|type=CDS|length=2697bp|location=Sequence derived from alignment at ch2:2495408..2498104- (Aspergillus niger KYF3)
ATGACGGACCCTGTTGTCTTGCAGTCGGCGGTGCGAGTGCCTACTCCGCC
CCCAGGCACTTCCTACTCTCCTCAGGCCTCGGGTTCCCGCAAACGCTCAC
CTCCCTCTCGGTCTCCTTCGCCGAATCGTCGTCGCTCGCCCCCGGGTGAT
TCACTAAAAGACGGTGCGGATGCACCGCGCATCGATCCTGAACGCGCGAT
TGAAAGAGAGCGACAGCTCGCCGAGCGCCTTCGCCAACATGAGAAGCAGG
AGGCTGCTCGAAAGCCAATGACGGAGGAGGAAAAGCAGGCTGCGGCTAAA
GCAGAATATGAGAAGCTTTTGAACATGCGATCGGGTGGTACCTATATTCC
TCCTGCGCGACTACGGGCGCTGCAGGCGCAGATTACGGACAAGACCAGCA
AGGAGTACCAGCGGATGGCATGGGAGGCTCTTAAGAAGTCGATCAACGGT
CTCATCAACAAGGTCAACGTTTCCAACATCAAGTTTATCGTCCCGGAGCT
TTTTGGGGAGAACTTGGTGCGCGGTCGCGGTCTGTTTTGCAGAAGTATCA
TGAAAGCTCAGGCGGCCAGTTTGCCCTTCACACCTATCTACGCCGCCATG
GCGGCTATTGTGAACACCAAACTGCCCCAAGTCGGCGAGCTGTTGCTCAA
CCGTCTCATTGTCCAGTTCCGAAAGGCGTTCAAGAGAAACGACAAGGCAG
TCTGCATATCTTCCACGACCTTCATTGCCCATCTGTGCAACCAGCAGGTC
GCGCACGAGATGCTGGCCGCGCAGATTCTTCTTTTGCTGCTTCACAAGCC
CACGGATGACAGTGTCGAGATTGCTGTCGGCCTGACTCGAGAGGTTGGTC
AGCATCTGGAGGAGATGAGCGGTCCTATTGCCCTGGCGGTGTTTGATCAA
TTCCGAAATATCCTTCACGAAGCCGACATCGACAAGCGAGTACAGTATAT
GATTGAGGTGTTGTTCCAGGTCCGGAAAGATAGGTATAAGGACAACCCGG
CGATCAAGGAAGAATTGGACCTGATCGAGGAGGAAGACCAAATAACGCAT
CAGATCGGACTCGATGACGAGATTGAGACACAAGATTCCCTCAATATCTT
CAAGTACGATGCCGAATGGGAGGAGCACGAAGAGGCCTACAAGAAATTGA
AGGCAGAGATTCTGGGTGAAGGAAGTGATGACGAGGAGGACGACGAAGAC
GAGTCAGACGAGAGCTCCGATGAAGAGTCGGAGGAAGAGCGGAAGATGGA
CATTAAAGACCAGACCAACACAGACCTCGTGAACCTGCGGAGGACGATAT
ACCTGACGATCATGTCGAGTATCGATTTCGAAGAATGCTGTCACAAGCTG
ATGAAGATCTCGCTGCCCGCTGGCCTCGAGCCCGAGCTCCCGTCAATGAT
CATCGAGTGTTGCTCCCAGGAGCGCACGTATTCGAAGTTCTACGGCTTGA
TCGGAGAGCGCTTCGCAAAGATCAACCGGCTCTGGTCCGATCTCTTCGAA
GCTGCATTTGCCAAGTACTACGACACCATCCATCGCTACGAGACAAACCG
ACTCCGCAATATTGCCCGCTTCTTCGGCCATATGATTAGCAATGACGCGA
TTGGCTGGCATGTCATGTCGATCATCCACATGAACGAGGAGGAGACGACA
TCAAGCAGCCGTATCTTCATCAAGATCCTCTTCCAAGACCTCGGAGAACA
CCTGGGCCTGCCCAAACTGCAGGAACGCATGCGGGACGAGATCCTGCGTC
CCAGCTTCGAGGGCCTCTTCCCACTGGACAATCCCCGCAACACGCGCTTC
TCAATCAACTACTTCACCAGTATCGGCATGGGTATGCTGACGGAGGACAT
GCGCGAGCACCTAAAAAACCTCCCCAAGCCCACGATGCCTGCATTGCCCC
AACGCGATGCCGGCGCCGACTCCGACTCCGAGTCCGTGGTATCTCACCCA
ACCAGCTGCTCAACCTGTACTCCTCGCTCTCGCTCCCGCTCCCGCTCCTA
CTCCTACTCCCGCTCTCCTTCCCCCGGCCGTGGCCGCAGACGCTCCGTCA
GCCGCGGCCGATCCTACAGCCGCTCCGTGTCCGGATCCTCACGCCGCAGC
TACAGCTACACCCCTTCGCGGTCCAGGTCCCGATCCCCGGCGCCCAAATC
CCGCCGACGCCCCGTCTCATACAGTCGATCCCCCCGCAGAAGATCCTCCG
TGTCCCCAACACCCCCTCCTCGCCGGACACGCGATCGCTCCTACGATTCC
CGCTCTCCCAGACGCTCGCTCTCCCGGTCCGTCACCCCTCCGCCTCGCAG
CAAGCGAGATACCCACGCCCGCCGAGACAGAAGCTACTCCAGATCCGTCT
CCCGATCTGTCTCCCCTCCTCCACGTCAGGCTGCCGGAGGTGCCGCTCGG
TACTCGGAGTCTCCTCCTCCCCGCCGGCGGGTCGAAAGGAGCGTCTCCGC
GTCTCGCTCTCCTTCCCGTTCTCGTTCTCGTACTCCGGAGCGTCGTGCCC
CGCCTGGTCGTCGTGCCCCCCGTGATGCTTCAGTCTCGCGCTCGCGCTCC
CCTACCCCGCCGCGCGGTGGTGGTCGTCGTGGCGATGCTCCCCCTCGTCG
TCGTCGCTACTCTGACTCGTTGTCTCCGTCGCGGTCTCCGCCGCCGAGAC
GGCACAGGTCTCCGTCTAGAACGCCTCCCCGTCGGGTGCGCGATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CWC22KYF_002101Aspergillus niger KYF3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002101-T1.cdsKYF_002101-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002101-T1.exon1KYF_002101-T1.exon1Aspergillus niger KYF3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_002101-T1KYF_002101-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263WM5
DBxrefInterPro:IPR016024
DBxrefInterPro:IPR016021
DBxrefInterPro:IPR003891
DBxrefInterPro:IPR003890
DBxrefPFAM:PF02847
Productpre-mRNA-splicing factor cwc22
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2495408..2498104 -
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