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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2535667..2537054+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_002116-T1 ID=KYF_002116-T1|Name=KYF_002116-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1388bp|location=Sequence derived from alignment at ch2:2535667..2537054+ (Aspergillus niger KYF3)
ATGTTCTCCGGCTCCTCCCTCTTTCCGCACTGGCGGCGCAAAGCAGCCGA
ACGCTCCAGTAATAGTTCCTACGAGGTGCCCTTCTTCCTGAACGCTGCCT
ATTATCCCAATTGGAGGATATACCGGAAACAGCCTCCGTCGGCCCTTCGA
TTGGGCTTCATTTCTCATATCTTCTACGCGTTTGCATGGTACTAGTAACC
TCAAGTCGGCACCATGCTGATGGTCCCAGTCCATACCCAGAGACAGTTGT
TAACCAGCCTGCTTTTCTCGTTCATAGGGTCAAAGAAGATGGTACCGTTT
ATGTAACCAGTCCTCTCTCCCCATTGTGAGGGGCTGCTCTGGCTGACAAG
ACATGACTTCAAAACCAGCTTAGTGACGAATGGGCCGATGCGCAAATGCC
CGTCGACGGCACCAACGGCTGCCTGCGGGCCTTCGCGCAACTGAAGCCGC
AGTATTCCAAGATGAAACTCATTCTCTCAGTCGGAGGAGGCGGCAAGGGC
AGTGAGAACTTCGCCCAAGTGGCCCGCAGTCAATCCCGCACCGAGACGTT
TGTTCGGAGCGCGAGAGCACTGGTGGATCAATTTGGTCTGGACGGCATCG
ACGGTACGTGTAATGGAGCCGAGCCCCTCTCCCTTTATCATCATGGATGC
GTCATGTCGGTATAGTGAACAGAAAATAAGGTAAAATTGTGTGCATGCCC
TAAGGCTAACCAACCTTGTGCTGGCCCAACAGTGGATTGGGAATACCCCT
CCGACCCACAAGAAGGATCGGACTATATCCGTCTGCTGGCGCGACTGCGC
GAAGTCCTGCCGGCCCCGCGTTATGTTCTGGCCTCTTGTCTCCCGGCCGG
ACCATGGGCTCTCCGTAACATCGATCTTTCCAAGGCGCAACTCTATCTTG
ACCTGATCAATATCATGGCGTATGATTTCTCGGGCCCTTGGGAGAACCAG
TCGGGTCATCAGGCCCAGCTCTTCAGCAAGCATCCCGCAGCCATTTCATG
CCAAAACTCTATCTCGTACGTGCTCAACCAGGGCGTCGACCCCAAGAAGC
TCCTTCTGGGCATCCCCGCATACGGCCGCTCGTTCCTGGGTAGCACTGGA
GTTGGTCAGCGGTATGTAGGCTGTGGCGGTGAAGACGGCGTCTTCGACTA
TAGCCAGCTGCCGCGACCGGGAGCCAAGGAGCATCACGACAGCAGTCTGG
GGGCAGCATACTGCGTAGGGGGAGATGGCGGCTTCGTCACATATGACACA
CCCCAGACAGTGCAGCAGAAGGCGAAATTCGTCACAAAGATGAAGCTGGG
CGGGTTATTCTACTGGCATATTGGAGGCGACGCACGGGGACCGCGAAGTC
TGATTGAAACAGGGTATAACACATTGCATGATATGTAA back to topCoding sequence (CDS) from alignment at ch2:2535667..2537054+ >KYF_002116-T1 ID=KYF_002116-T1|Name=KYF_002116-T1|organism=Aspergillus niger KYF3|type=CDS|length=4572bp|location=Sequence derived from alignment at ch2:2535667..2537054+ (Aspergillus niger KYF3)
ATGTTCTCCGGCTCCTCCCTCTTTCCGCACTGGCGGCGCAAAGCAGCCGA
ACGCTCCAGTAATAGTTCCTACGAGGTGCCCTTCTTCCTGAACGCTGCCT
ATTATCCCAATTGGAGGATATACCGGAAACAGCCTCCGTCGGCCCTTCGA
TTGGGCTTCATTTCTCATATCTTCTACGCTCCATACCCAGAGACAGTTGT
TAACCAGCCTGCTTTTCTCGTTCATAGGGTCAAAGAAGATGGTACCGTTT
ATCTTAGTGACGAATGGGCCGATGCGCAAATGCCCGTCGACGGCACCAAC
GGCTGCCTGCGGGCCTTCGCGCAACTGAAGCCGCAGTATTCCAAGATGAA
ACTCATTCTCTCAGTCGGAGGAGGCGGCAAGGGCAGTGAGAACTTCGCCC
AAGTGGCCCGCAGTCAATCCCGCACCGAGACGTTTGTTCGGAGCGCGAGA
GCACTGGTGGATCAATTTGGTCTGGACGGCATCGACGTGGATTGGGAATA
CCCCTCCGACCCACAAGAAGGATCGGACTATATCCGTCTGCTGGCGCGAC
TGCGCGAAGTCCTGCCGGCCCCGCGTTATGTTCTGGCCTCTTGTCTCCCG
GCCGGACCATGGGCTCTCCGTAACATCGATCTTTCCAAGGCGCAACTCTA
TCTTGACCTGATCAATATCATGGCGTATGATTTCTCGGGCCCTTGGGAGA
ACCAGTCGGGTCATCAGGCCCAGCTCTTCAGCAAGCATCCCGCAGCCATT
TCATGCCAAAACTCTATCTCGTACGTGCTCAACCAGGGCGTCGACCCCAA
GAAGCTCCTTCTGGGCATCCCCGCATACGGCCGCTCGTTCCTGGGTAGCA
CTGGAGTTGGTCAGCGGTATGTAGGCTGTGGCGGTGAAGACGGCGTCTTC
GACTATAGCCAGCTGCCGCGACCGGGAGCCAAGGAGCATCACGACAGCAG
TCTGGGGGCAGCATACTGCGTAGGGGGAGATGGCGGCTTCGTCACATATG
ACACACCCCAGACAGTGCAGCAGAAGGCGAAATTCGTCACAAAGATGAAG
CTGGGCGGGTTATTCTACTGGCATATTGGAGGCGACGCACGGGGACCGCG
AAGTCTGATTGAAACAGGGTATAACACATTGCATGATATGTAAATGTTCT
CCGGCTCCTCCCTCTTTCCGCACTGGCGGCGCAAAGCAGCCGAACGCTCC
AGTAATAGTTCCTACGAGGTGCCCTTCTTCCTGAACGCTGCCTATTATCC
CAATTGGAGGATATACCGGAAACAGCCTCCGTCGGCCCTTCGATTGGGCT
TCATTTCTCATATCTTCTACGCTCCATACCCAGAGACAGTTGTTAACCAG
CCTGCTTTTCTCGTTCATAGGGTCAAAGAAGATGGTACCGTTTATCTTAG
TGACGAATGGGCCGATGCGCAAATGCCCGTCGACGGCACCAACGGCTGCC
TGCGGGCCTTCGCGCAACTGAAGCCGCAGTATTCCAAGATGAAACTCATT
CTCTCAGTCGGAGGAGGCGGCAAGGGCAGTGAGAACTTCGCCCAAGTGGC
CCGCAGTCAATCCCGCACCGAGACGTTTGTTCGGAGCGCGAGAGCACTGG
TGGATCAATTTGGTCTGGACGGCATCGACGTGGATTGGGAATACCCCTCC
GACCCACAAGAAGGATCGGACTATATCCGTCTGCTGGCGCGACTGCGCGA
AGTCCTGCCGGCCCCGCGTTATGTTCTGGCCTCTTGTCTCCCGGCCGGAC
CATGGGCTCTCCGTAACATCGATCTTTCCAAGGCGCAACTCTATCTTGAC
CTGATCAATATCATGGCGTATGATTTCTCGGGCCCTTGGGAGAACCAGTC
GGGTCATCAGGCCCAGCTCTTCAGCAAGCATCCCGCAGCCATTTCATGCC
AAAACTCTATCTCGTACGTGCTCAACCAGGGCGTCGACCCCAAGAAGCTC
CTTCTGGGCATCCCCGCATACGGCCGCTCGTTCCTGGGTAGCACTGGAGT
TGGTCAGCGGTATGTAGGCTGTGGCGGTGAAGACGGCGTCTTCGACTATA
GCCAGCTGCCGCGACCGGGAGCCAAGGAGCATCACGACAGCAGTCTGGGG
GCAGCATACTGCGTAGGGGGAGATGGCGGCTTCGTCACATATGACACACC
CCAGACAGTGCAGCAGAAGGCGAAATTCGTCACAAAGATGAAGCTGGGCG
GGTTATTCTACTGGCATATTGGAGGCGACGCACGGGGACCGCGAAGTCTG
ATTGAAACAGGGTATAACACATTGCATGATATGTAAATGTTCTCCGGCTC
CTCCCTCTTTCCGCACTGGCGGCGCAAAGCAGCCGAACGCTCCAGTAATA
GTTCCTACGAGGTGCCCTTCTTCCTGAACGCTGCCTATTATCCCAATTGG
AGGATATACCGGAAACAGCCTCCGTCGGCCCTTCGATTGGGCTTCATTTC
TCATATCTTCTACGCTCCATACCCAGAGACAGTTGTTAACCAGCCTGCTT
TTCTCGTTCATAGGGTCAAAGAAGATGGTACCGTTTATCTTAGTGACGAA
TGGGCCGATGCGCAAATGCCCGTCGACGGCACCAACGGCTGCCTGCGGGC
CTTCGCGCAACTGAAGCCGCAGTATTCCAAGATGAAACTCATTCTCTCAG
TCGGAGGAGGCGGCAAGGGCAGTGAGAACTTCGCCCAAGTGGCCCGCAGT
CAATCCCGCACCGAGACGTTTGTTCGGAGCGCGAGAGCACTGGTGGATCA
ATTTGGTCTGGACGGCATCGACGTGGATTGGGAATACCCCTCCGACCCAC
AAGAAGGATCGGACTATATCCGTCTGCTGGCGCGACTGCGCGAAGTCCTG
CCGGCCCCGCGTTATGTTCTGGCCTCTTGTCTCCCGGCCGGACCATGGGC
TCTCCGTAACATCGATCTTTCCAAGGCGCAACTCTATCTTGACCTGATCA
ATATCATGGCGTATGATTTCTCGGGCCCTTGGGAGAACCAGTCGGGTCAT
CAGGCCCAGCTCTTCAGCAAGCATCCCGCAGCCATTTCATGCCAAAACTC
TATCTCGTACGTGCTCAACCAGGGCGTCGACCCCAAGAAGCTCCTTCTGG
GCATCCCCGCATACGGCCGCTCGTTCCTGGGTAGCACTGGAGTTGGTCAG
CGGTATGTAGGCTGTGGCGGTGAAGACGGCGTCTTCGACTATAGCCAGCT
GCCGCGACCGGGAGCCAAGGAGCATCACGACAGCAGTCTGGGGGCAGCAT
ACTGCGTAGGGGGAGATGGCGGCTTCGTCACATATGACACACCCCAGACA
GTGCAGCAGAAGGCGAAATTCGTCACAAAGATGAAGCTGGGCGGGTTATT
CTACTGGCATATTGGAGGCGACGCACGGGGACCGCGAAGTCTGATTGAAA
CAGGGTATAACACATTGCATGATATGTAAATGTTCTCCGGCTCCTCCCTC
TTTCCGCACTGGCGGCGCAAAGCAGCCGAACGCTCCAGTAATAGTTCCTA
CGAGGTGCCCTTCTTCCTGAACGCTGCCTATTATCCCAATTGGAGGATAT
ACCGGAAACAGCCTCCGTCGGCCCTTCGATTGGGCTTCATTTCTCATATC
TTCTACGCTCCATACCCAGAGACAGTTGTTAACCAGCCTGCTTTTCTCGT
TCATAGGGTCAAAGAAGATGGTACCGTTTATCTTAGTGACGAATGGGCCG
ATGCGCAAATGCCCGTCGACGGCACCAACGGCTGCCTGCGGGCCTTCGCG
CAACTGAAGCCGCAGTATTCCAAGATGAAACTCATTCTCTCAGTCGGAGG
AGGCGGCAAGGGCAGTGAGAACTTCGCCCAAGTGGCCCGCAGTCAATCCC
GCACCGAGACGTTTGTTCGGAGCGCGAGAGCACTGGTGGATCAATTTGGT
CTGGACGGCATCGACGTGGATTGGGAATACCCCTCCGACCCACAAGAAGG
ATCGGACTATATCCGTCTGCTGGCGCGACTGCGCGAAGTCCTGCCGGCCC
CGCGTTATGTTCTGGCCTCTTGTCTCCCGGCCGGACCATGGGCTCTCCGT
AACATCGATCTTTCCAAGGCGCAACTCTATCTTGACCTGATCAATATCAT
GGCGTATGATTTCTCGGGCCCTTGGGAGAACCAGTCGGGTCATCAGGCCC
AGCTCTTCAGCAAGCATCCCGCAGCCATTTCATGCCAAAACTCTATCTCG
TACGTGCTCAACCAGGGCGTCGACCCCAAGAAGCTCCTTCTGGGCATCCC
CGCATACGGCCGCTCGTTCCTGGGTAGCACTGGAGTTGGTCAGCGGTATG
TAGGCTGTGGCGGTGAAGACGGCGTCTTCGACTATAGCCAGCTGCCGCGA
CCGGGAGCCAAGGAGCATCACGACAGCAGTCTGGGGGCAGCATACTGCGT
AGGGGGAGATGGCGGCTTCGTCACATATGACACACCCCAGACAGTGCAGC
AGAAGGCGAAATTCGTCACAAAGATGAAGCTGGGCGGGTTATTCTACTGG
CATATTGGAGGCGACGCACGGGGACCGCGAAGTCTGATTGAAACAGGGTA
TAACACATTGCATGATATGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0008061 | chitin binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH18 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR001579 |
| DBxref | InterPro:IPR001223 |
| DBxref | InterPro:IPR029070 |
| DBxref | InterPro:IPR011583 |
| DBxref | PFAM:PF00704 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2535667..2537054 + |
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