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KYF_002268-T1, KYF_002268-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_002268-T1
Unique NameKYF_002268-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2971820..2973003+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_002268-T1 ID=KYF_002268-T1|Name=KYF_002268-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1184bp|location=Sequence derived from alignment at ch2:2971820..2973003+ (Aspergillus niger KYF3)
ATGCCGGAGCTAGCGGAAGTCTCGCGTATAGTCCATTTCCTTCGTCAACA
TCTTGTCGGCAAAACGCTTTCCAAGGTGTCAGTGCAAAACGATGACATTA
TCTACGGCAAAGCCGGTACTACTGCTGCCGAGTTTCAGAAGGCAATGGAG
GGGAAGAAAGTTACTGGTGCCGGACAGCAGGGCAAGTACTTCTGGATTGC
TATGTCATCACCACCCCATGCGGTTATGCATTTCGGTATGGCGGGCTGGC
TGAAAATCCGGGATGCCGACACCTATTACTACCGGACAGACAAACCAGGA
GATAAGGAGTGGCCGCCAAAATACTGGAAATTCTTGCTCGAAACCGAGGG
AGATCCAAAGACAGAAGCTGCTTTTGTTGACTTTCGCCGACTGGGCAGAA
TACGCCTGGTAGACTGTCCCGCGGAGGAAATCCGTAACTACAGCCCTCTG
AAAGAGAATGGCCCAGATCCTGTCGCCGATAAAGACATTGTGTCGGAGGA
GTGGCTGGCAAAGAAGCTCCGAAGCAAGAAGGTACCTGTGAAGGCGCTGC
TCCTTGATCAAGCGAATATCAGCGGAATAGGCAACTGGATGGGGTATGCT
CCTTCAGTCTCCCACCATGACTGATTACATCTAGCTGACTGATTTCTAGC
GATGAGATCCTCTACCAAGCTAAAATACACCCTGAGCAATACAGCAACAC
TTTGGATGACGACCAGATTAGAGAGCTGCACTCAGCGATACATTATATCT
GTTCCACCTCCGTAGAGCTTCTAGCAGATTCGGAGAAATTTCCAGCTGAC
TGGCTGTTCAAACATCGGTGGAGTAAAGGCAAGAAGAACACGCCATCAGT
GCTGCCAAACGGAGAAAAGATTACCTTTCTCACGGTAGGGGGCAGGACCA
GCGCAGTGGTTCCGAGTGTGCAGAAAAAAACTGGGCCAGTAGCCAAGGAC
GTCAGCAGTGAAGACGCCAGCAATGCGCCGGCAAACTCGAAGCGAAAGCG
GGCTTCAGTGAAAAAGGAGGAGAGCGAGCCGGAAGCTAGCGAAGAGGATA
CGAAGCCCAAGAAGACCGGGCCCAAAAGGCAAAGCAGAACTTCTGTCAAG
AAGGAAGACATCGATGAGACAGAGACTAAGCCGATAGAAGAACAGCAAAC
TACCAGGAGACGCTCGGACCGACTTCGAAAGTAG
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Coding sequence (CDS) from alignment at ch2:2971820..2973003+

>KYF_002268-T1 ID=KYF_002268-T1|Name=KYF_002268-T1|organism=Aspergillus niger KYF3|type=CDS|length=2256bp|location=Sequence derived from alignment at ch2:2971820..2973003+ (Aspergillus niger KYF3)
ATGCCGGAGCTAGCGGAAGTCTCGCGTATAGTCCATTTCCTTCGTCAACA
TCTTGTCGGCAAAACGCTTTCCAAGGTGTCAGTGCAAAACGATGACATTA
TCTACGGCAAAGCCGGTACTACTGCTGCCGAGTTTCAGAAGGCAATGGAG
GGGAAGAAAGTTACTGGTGCCGGACAGCAGGGCAAGTACTTCTGGATTGC
TATGTCATCACCACCCCATGCGGTTATGCATTTCGGTATGGCGGGCTGGC
TGAAAATCCGGGATGCCGACACCTATTACTACCGGACAGACAAACCAGGA
GATAAGGAGTGGCCGCCAAAATACTGGAAATTCTTGCTCGAAACCGAGGG
AGATCCAAAGACAGAAGCTGCTTTTGTTGACTTTCGCCGACTGGGCAGAA
TACGCCTGGTAGACTGTCCCGCGGAGGAAATCCGTAACTACAGCCCTCTG
AAAGAGAATGGCCCAGATCCTGTCGCCGATAAAGACATTGTGTCGGAGGA
GTGGCTGGCAAAGAAGCTCCGAAGCAAGAAGGTACCTGTGAAGGCGCTGC
TCCTTGATCAAGCGAATATCAGCGGAATAGGCAACTGGATGGGCGATGAG
ATCCTCTACCAAGCTAAAATACACCCTGAGCAATACAGCAACACTTTGGA
TGACGACCAGATTAGAGAGCTGCACTCAGCGATACATTATATCTGTTCCA
CCTCCGTAGAGCTTCTAGCAGATTCGGAGAAATTTCCAGCTGACTGGCTG
TTCAAACATCGGTGGAGTAAAGGCAAGAAGAACACGCCATCAGTGCTGCC
AAACGGAGAAAAGATTACCTTTCTCACGGTAGGGGGCAGGACCAGCGCAG
TGGTTCCGAGTGTGCAGAAAAAAACTGGGCCAGTAGCCAAGGACGTCAGC
AGTGAAGACGCCAGCAATGCGCCGGCAAACTCGAAGCGAAAGCGGGCTTC
AGTGAAAAAGGAGGAGAGCGAGCCGGAAGCTAGCGAAGAGGATACGAAGC
CCAAGAAGACCGGGCCCAAAAGGCAAAGCAGAACTTCTGTCAAGAAGGAA
GACATCGATGAGACAGAGACTAAGCCGATAGAAGAACAGCAAACTACCAG
GAGACGCTCGGACCGACTTCGAAAGTAGATGCCGGAGCTAGCGGAAGTCT
CGCGTATAGTCCATTTCCTTCGTCAACATCTTGTCGGCAAAACGCTTTCC
AAGGTGTCAGTGCAAAACGATGACATTATCTACGGCAAAGCCGGTACTAC
TGCTGCCGAGTTTCAGAAGGCAATGGAGGGGAAGAAAGTTACTGGTGCCG
GACAGCAGGGCAAGTACTTCTGGATTGCTATGTCATCACCACCCCATGCG
GTTATGCATTTCGGTATGGCGGGCTGGCTGAAAATCCGGGATGCCGACAC
CTATTACTACCGGACAGACAAACCAGGAGATAAGGAGTGGCCGCCAAAAT
ACTGGAAATTCTTGCTCGAAACCGAGGGAGATCCAAAGACAGAAGCTGCT
TTTGTTGACTTTCGCCGACTGGGCAGAATACGCCTGGTAGACTGTCCCGC
GGAGGAAATCCGTAACTACAGCCCTCTGAAAGAGAATGGCCCAGATCCTG
TCGCCGATAAAGACATTGTGTCGGAGGAGTGGCTGGCAAAGAAGCTCCGA
AGCAAGAAGGTACCTGTGAAGGCGCTGCTCCTTGATCAAGCGAATATCAG
CGGAATAGGCAACTGGATGGGCGATGAGATCCTCTACCAAGCTAAAATAC
ACCCTGAGCAATACAGCAACACTTTGGATGACGACCAGATTAGAGAGCTG
CACTCAGCGATACATTATATCTGTTCCACCTCCGTAGAGCTTCTAGCAGA
TTCGGAGAAATTTCCAGCTGACTGGCTGTTCAAACATCGGTGGAGTAAAG
GCAAGAAGAACACGCCATCAGTGCTGCCAAACGGAGAAAAGATTACCTTT
CTCACGGTAGGGGGCAGGACCAGCGCAGTGGTTCCGAGTGTGCAGAAAAA
AACTGGGCCAGTAGCCAAGGACGTCAGCAGTGAAGACGCCAGCAATGCGC
CGGCAAACTCGAAGCGAAAGCGGGCTTCAGTGAAAAAGGAGGAGAGCGAG
CCGGAAGCTAGCGAAGAGGATACGAAGCCCAAGAAGACCGGGCCCAAAAG
GCAAAGCAGAACTTCTGTCAAGAAGGAAGACATCGATGAGACAGAGACTA
AGCCGATAGAAGAACAGCAAACTACCAGGAGACGCTCGGACCGACTTCGA
AAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006289nucleotide-excision repair
GO:0006284base-excision repair
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0016799hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0008270zinc ion binding
GO:0003684damaged DNA binding
GO:0003906DNA-(apurinic or apyrimidinic site) endonuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_002268KYF_002268Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002268-T1.exon1KYF_002268-T1.exon1Aspergillus niger KYF3exon
KYF_002268-T1.exon2KYF_002268-T1.exon2Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002268-T1.cdsKYF_002268-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_002268-T1KYF_002268-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR010979
DBxrefInterPro:IPR035937
DBxrefInterPro:IPR015886
DBxrefInterPro:IPR012319
DBxrefPFAM:PF06831
DBxrefPFAM:PF01149
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2971820..2973003 +
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