|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3047109..3047877+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_002299-T1 ID=KYF_002299-T1|Name=KYF_002299-T1|organism=Aspergillus niger KYF3|type=mRNA|length=769bp|location=Sequence derived from alignment at ch2:3047109..3047877+ (Aspergillus niger KYF3)
ATGACAAGCGCAACAACATCAACAACAACAACAACCCCACCCTTCCAATT
CCCCCTCACCTACTCATTTCCAGCCTTCTTCACCCCCCAACCCAACAGCA
CGACACGCACCTCCCAACTCCAAAAATGGTCTTCCCTGATCCAATCCTGG
TGCCGACACCACCGCGTCTACCGACTATCGTTAATCGAAGCCATCGAGTC
ACCATTATTCCATAACACGACGCTCCGAAAGCGCATCTCGATGAGCGATG
CGCGGGATATTCTAGACTGGATGGCGAAAAGTGAAGAGGAGGGTGGTGGC
GGGAAGAGAGCGGAGTGGATTGATGGTGGGAGTAAGAGTGTTGCGTGGAT
TTGGTGGAAGAGGCCTGAGGAGTGGGCAGGGTTGATTGCGGATTGGGTAT
GTATTCTTATATTCCGGATCATCATTCGAGATGTTGGAGGGGAGTTGGGG
GTAGAGTTGGGATTGAGGGGAGATAGTTGCTAATTGCTTATTTTTGCTGT
ATAGGTGGAAAACACTGGCCAGAAGAACGTGGTGCTTACGGTTTATGAGT
TGTTGGAGGGGGAGGCCACGATGTCGCAAGGTAGGTTAAGTGGATTTGCT
CCTAATCATTGGGTGATGCTGGTATGGTATGGTGGCTAATGGTTCGGCTG
GAATAGAATGGCATGGGATGGACCCCGATGTGATGCACAAGTCCCTCAAT
GTTCTCGTGAAACGGGGCAAGGCGCAGGTCTTCGGTAGCGAAGGCCAGGA
GGGTGTCAAGTTCTTCTAG back to topCoding sequence (CDS) from alignment at ch2:3047109..3047877+ >KYF_002299-T1 ID=KYF_002299-T1|Name=KYF_002299-T1|organism=Aspergillus niger KYF3|type=CDS|length=1755bp|location=Sequence derived from alignment at ch2:3047109..3047877+ (Aspergillus niger KYF3)
ATGACAAGCGCAACAACATCAACAACAACAACAACCCCACCCTTCCAATT
CCCCCTCACCTACTCATTTCCAGCCTTCTTCACCCCCCAACCCAACAGCA
CGACACGCACCTCCCAACTCCAAAAATGGTCTTCCCTGATCCAATCCTGG
TGCCGACACCACCGCGTCTACCGACTATCGTTAATCGAAGCCATCGAGTC
ACCATTATTCCATAACACGACGCTCCGAAAGCGCATCTCGATGAGCGATG
CGCGGGATATTCTAGACTGGATGGCGAAAAGTGAAGAGGAGGGTGGTGGC
GGGAAGAGAGCGGAGTGGATTGATGGTGGGAGTAAGAGTGTTGCGTGGAT
TTGGTGGAAGAGGCCTGAGGAGTGGGCAGGGTTGATTGCGGATTGGGTGG
AAAACACTGGCCAGAAGAACGTGGTGCTTACGGTTTATGAGTTGTTGGAG
GGGGAGGCCACGATGTCGCAAGAATGGCATGGGATGGACCCCGATGTGAT
GCACAAGTCCCTCAATGTTCTCGTGAAACGGGGCAAGGCGCAGGTCTTCG
GTAGCGAAGGCCAGGAGGGTGTCAAGTTCTTCTAGATGACAAGCGCAACA
ACATCAACAACAACAACAACCCCACCCTTCCAATTCCCCCTCACCTACTC
ATTTCCAGCCTTCTTCACCCCCCAACCCAACAGCACGACACGCACCTCCC
AACTCCAAAAATGGTCTTCCCTGATCCAATCCTGGTGCCGACACCACCGC
GTCTACCGACTATCGTTAATCGAAGCCATCGAGTCACCATTATTCCATAA
CACGACGCTCCGAAAGCGCATCTCGATGAGCGATGCGCGGGATATTCTAG
ACTGGATGGCGAAAAGTGAAGAGGAGGGTGGTGGCGGGAAGAGAGCGGAG
TGGATTGATGGTGGGAGTAAGAGTGTTGCGTGGATTTGGTGGAAGAGGCC
TGAGGAGTGGGCAGGGTTGATTGCGGATTGGGTGGAAAACACTGGCCAGA
AGAACGTGGTGCTTACGGTTTATGAGTTGTTGGAGGGGGAGGCCACGATG
TCGCAAGAATGGCATGGGATGGACCCCGATGTGATGCACAAGTCCCTCAA
TGTTCTCGTGAAACGGGGCAAGGCGCAGGTCTTCGGTAGCGAAGGCCAGG
AGGGTGTCAAGTTCTTCTAGATGACAAGCGCAACAACATCAACAACAACA
ACAACCCCACCCTTCCAATTCCCCCTCACCTACTCATTTCCAGCCTTCTT
CACCCCCCAACCCAACAGCACGACACGCACCTCCCAACTCCAAAAATGGT
CTTCCCTGATCCAATCCTGGTGCCGACACCACCGCGTCTACCGACTATCG
TTAATCGAAGCCATCGAGTCACCATTATTCCATAACACGACGCTCCGAAA
GCGCATCTCGATGAGCGATGCGCGGGATATTCTAGACTGGATGGCGAAAA
GTGAAGAGGAGGGTGGTGGCGGGAAGAGAGCGGAGTGGATTGATGGTGGG
AGTAAGAGTGTTGCGTGGATTTGGTGGAAGAGGCCTGAGGAGTGGGCAGG
GTTGATTGCGGATTGGGTGGAAAACACTGGCCAGAAGAACGTGGTGCTTA
CGGTTTATGAGTTGTTGGAGGGGGAGGCCACGATGTCGCAAGAATGGCAT
GGGATGGACCCCGATGTGATGCACAAGTCCCTCAATGTTCTCGTGAAACG
GGGCAAGGCGCAGGTCTTCGGTAGCGAAGGCCAGGAGGGTGTCAAGTTCT
TCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000814 | ESCRT II complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0071985 | multivesicular body sorting pathway |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR036388 |
| DBxref | InterPro:IPR014041 |
| DBxref | InterPro:IPR008570 |
| DBxref | PFAM:PF05871 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3047109..3047877 + |
|
