KYF_002340-T1, KYF_002340-T1 (mRNA) Aspergillus niger KYF3

Overview


Name	KYF_002340-T1
Unique Name	KYF_002340-T1
Type	mRNA
Organism	Aspergillus niger KYF3

Sequences

The following sequences are available for this feature:

mRNA from alignment at ch2:3167135..3169142+
coding sequence from alignment at ch2:3167135..3169142+

mRNA from alignment at ch2:3167135..3169142+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>KYF_002340-T1 ID=KYF_002340-T1|Name=KYF_002340-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2008bp|location=Sequence derived from alignment at ch2:3167135..3169142+ (Aspergillus niger KYF3)
ATGTCGGCTACTTCATTTCTGGACAAACCACTCCTCAAAGTCAGTCGACC
AGTGGCTGCTTGCTCAAGATGCCGAACAGCCAAAATCAAATGTGACGGGA
AGCTTCCGGCCTGCTCCGCGTGCGAAAGGGTCGGAAAAGCGAGCACCTGC
TCCGGCGCAAGTGACGAATTCGCCAGAGGAAAGGAAAGAAGCTATGTCGC
CTCTTTGGAAGGTTACTGCGAACGACTCAAAACGAAGATTGACGATCTTC
GCCGCCTCAAAACATCATTATCTGTGGACGAAAGGGGTGTCGCCCATCAA
AGCTCGATCACCTCCATCTCCTCGGCAGGTACTGTTGCACAGGAAGGTGG
CAAAGAAGTGACTGACATCGATGACCTCGTTGGTGATTTTGGCTTCTTGT
AAGTTCTCGCTGAAATTAGCACGATGTTCCTCGGACTGACACCAATCAGG
TCCGTCAATGCGACTTCGAGAGACTTCCATGGGATTACTTCGAATACGTC
TTTCGCCAATCTTCTTCTGTCCCTGTCTCAAGCTGAGTCGATACCAAGAA
CGACGGCGCAGTCAATACCGCCACGCCATGAGATAATGCCCGTGCTACAA
CACTATTTCGACAACATCTACATACAGCTTCCATTTTTCGCCGAAACGAG
CTTCTGGACATCTGTGGATGCGGTCTACCAAGCTGGGGGGCGCTTTGCCA
AGCCCTTTGACAAGTGGATTGTGCATATGGTCTTAGCCACTGCGTCTGCG
TCTATCTCCCTCGAGATCGGTGATAGAAGTCATCACAGAGCGTTGTCTCA
TGTTTCAATGGCAATGAATCAAGCCGAGGACGTCGTCCGTCCCGGTACTA
TAGCCGGTATCCAGTCAATCCTCCTGCTTGCCCAATATTCCTTATTCGAC
CCGCAACACTTTCGCAGCTGGTACTTAGTAGGGATGGCTGTCAGGGTAAT
GGTCGATCTAGGCCTACACCAGGACCCGCCTTTGGATGTTCAGTCAGCCT
CGGTGCAGCTGGACCTGCGCCGCCGTGTTTTCCATTGTGTCTATTGCTTG
GACAGGTGTGTTAAACTTCTTTTTGTCCCGGACACATACTTGCTACTTGA
TACTTGAGCTAACGAAAGAAACTCCATTTCACTTTTAAAGAGGAATAAGC
ACTGCCTTTGAAAGAACCTTCTCGTTCTCAGACGATTCCGTCGATGTTGC
TTTGCCGTCTTCTGCCACGTCCCTAGGGGCTTCGCTAACCGAAAAGAGCC
ATATATTTTTACGAAGCTCGGAGCCTGCGTGGCACATCGTCAGAATTCGC
CAAATACTGTCGGAGGGTTACCAGAGAAGATATTTTCATGAACACGAGAC
TTCTCTTCAAGCTCCGGCCTCGACGTGGGCTCTCTGCTCAAAAGCATACG
AGTGGTTTGATAAAATCCCGAGTAATATACCAAACCACTTCCCCATCCTG
TACCGATTGGAGCTATCATACACGATAGTCGTGATTCTCTCTGCTGGCGA
CGAACAGACCACACTATGTGATTACAGCAAGATTGTTCTGTTCCATTGCT
GCATGCGGTACATCAAAGAACTCTATGAGGTGCTGAAGAACCCTGCCTGG
CTGCCTTTGATGACCTTCCTGGATATTCAGAGGACGTATCAAGTTGGCCG
ACGATTCATACGAGATGTGACAGAAAACCAGGACCTTCTGTTGAACCCGT
CGATACCCGCATTGCCCTCAATTCCTCCGGAGACCCCGGAACAGCTGATT
TTGAATGGTGAGGATTGTATGAGCTTCCACGCGCGCGCCTCGGAATGTCT
TTCTCAGATCAACAATCTCCTCCAATATGGTGCAAGCAAGTGGGGAGCGA
CCAGCATACTTGGAGACTTCCAGCAAATGTGCGAGCCCGCCCGGAGCCGT
CTATTACATGCATCGAATCCATATCTGGCAGGTTCTGGGGCCTATATGGC
TGGCTACGCTTCATTGGTGCCTGCAGGAACAGGATACCTAGGCTTTGACA
TTGGATGA

Coding sequence (CDS) from alignment at ch2:3167135..3169142+

>KYF_002340-T1 ID=KYF_002340-T1|Name=KYF_002340-T1|organism=Aspergillus niger KYF3|type=CDS|length=4455bp|location=Sequence derived from alignment at ch2:3167135..3169142+ (Aspergillus niger KYF3)
ATGTCGGCTACTTCATTTCTGGACAAACCACTCCTCAAAGTCAGTCGACC
AGTGGCTGCTTGCTCAAGATGCCGAACAGCCAAAATCAAATGTGACGGGA
AGCTTCCGGCCTGCTCCGCGTGCGAAAGGGTCGGAAAAGCGAGCACCTGC
TCCGGCGCAAGTGACGAATTCGCCAGAGGAAAGGAAAGAAGCTATGTCGC
CTCTTTGGAAGGTTACTGCGAACGACTCAAAACGAAGATTGACGATCTTC
GCCGCCTCAAAACATCATTATCTGTGGACGAAAGGGGTGTCGCCCATCAA
AGCTCGATCACCTCCATCTCCTCGGCAGGTACTGTTGCACAGGAAGGTGG
CAAAGAAGTGACTGACATCGATGACCTCGTTGGTGATTTTGGCTTCTTGT
CCGTCAATGCGACTTCGAGAGACTTCCATGGGATTACTTCGAATACGTCT
TTCGCCAATCTTCTTCTGTCCCTGTCTCAAGCTGAGTCGATACCAAGAAC
GACGGCGCAGTCAATACCGCCACGCCATGAGATAATGCCCGTGCTACAAC
ACTATTTCGACAACATCTACATACAGCTTCCATTTTTCGCCGAAACGAGC
TTCTGGACATCTGTGGATGCGGTCTACCAAGCTGGGGGGCGCTTTGCCAA
GCCCTTTGACAAGTGGATTGTGCATATGGTCTTAGCCACTGCGTCTGCGT
CTATCTCCCTCGAGATCGGTGATAGAAGTCATCACAGAGCGTTGTCTCAT
GTTTCAATGGCAATGAATCAAGCCGAGGACGTCGTCCGTCCCGGTACTAT
AGCCGGTATCCAGTCAATCCTCCTGCTTGCCCAATATTCCTTATTCGACC
CGCAACACTTTCGCAGCTGGTACTTAGTAGGGATGGCTGTCAGGGTAATG
GTCGATCTAGGCCTACACCAGGACCCGCCTTTGGATGTTCAGTCAGCCTC
GGTGCAGCTGGACCTGCGCCGCCGTGTTTTCCATTGTGTCTATTGCTTGG
ACAGCAAGATTGTTCTGTTCCATTGCTGCATGCGGTACATCAAAGAACTC
TATGAGGTGCTGAAGAACCCTGCCTGGCTGCCTTTGATGACCTTCCTGGA
TATTCAGAGGACGTATCAAGTTGGCCGACGATTCATACGAGATGTGACAG
AAAACCAGGACCTTCTGTTGAACCCGTCGATACCCGCATTGCCCTCAATT
CCTCCGGAGACCCCGGAACAGCTGATTTTGAATGGTGAGGATTGTATGAG
CTTCCACGCGCGCGCCTCGGAATGTCTTTCTCAGATCAACAATCTCCTCC
AATATGGTGCAAGCAAGTGGGGAGCGACCAGCATACTTGGAGACTTCCAG
CAAATGTGCGAGCCCGCCCGGAGCCGTCTATTACATGCATCGAATCCATA
TCTGGCAGGTTCTGGGGCCTATATGGCTGGCTACGCTTCATTGGTGCCTG
CAGGAACAGGATACCTAGGCTTTGACATTGGATGAATGTCGGCTACTTCA
TTTCTGGACAAACCACTCCTCAAAGTCAGTCGACCAGTGGCTGCTTGCTC
AAGATGCCGAACAGCCAAAATCAAATGTGACGGGAAGCTTCCGGCCTGCT
CCGCGTGCGAAAGGGTCGGAAAAGCGAGCACCTGCTCCGGCGCAAGTGAC
GAATTCGCCAGAGGAAAGGAAAGAAGCTATGTCGCCTCTTTGGAAGGTTA
CTGCGAACGACTCAAAACGAAGATTGACGATCTTCGCCGCCTCAAAACAT
CATTATCTGTGGACGAAAGGGGTGTCGCCCATCAAAGCTCGATCACCTCC
ATCTCCTCGGCAGGTACTGTTGCACAGGAAGGTGGCAAAGAAGTGACTGA
CATCGATGACCTCGTTGGTGATTTTGGCTTCTTGTCCGTCAATGCGACTT
CGAGAGACTTCCATGGGATTACTTCGAATACGTCTTTCGCCAATCTTCTT
CTGTCCCTGTCTCAAGCTGAGTCGATACCAAGAACGACGGCGCAGTCAAT
ACCGCCACGCCATGAGATAATGCCCGTGCTACAACACTATTTCGACAACA
TCTACATACAGCTTCCATTTTTCGCCGAAACGAGCTTCTGGACATCTGTG
GATGCGGTCTACCAAGCTGGGGGGCGCTTTGCCAAGCCCTTTGACAAGTG
GATTGTGCATATGGTCTTAGCCACTGCGTCTGCGTCTATCTCCCTCGAGA
TCGGTGATAGAAGTCATCACAGAGCGTTGTCTCATGTTTCAATGGCAATG
AATCAAGCCGAGGACGTCGTCCGTCCCGGTACTATAGCCGGTATCCAGTC
AATCCTCCTGCTTGCCCAATATTCCTTATTCGACCCGCAACACTTTCGCA
GCTGGTACTTAGTAGGGATGGCTGTCAGGGTAATGGTCGATCTAGGCCTA
CACCAGGACCCGCCTTTGGATGTTCAGTCAGCCTCGGTGCAGCTGGACCT
GCGCCGCCGTGTTTTCCATTGTGTCTATTGCTTGGACAGCAAGATTGTTC
TGTTCCATTGCTGCATGCGGTACATCAAAGAACTCTATGAGGTGCTGAAG
AACCCTGCCTGGCTGCCTTTGATGACCTTCCTGGATATTCAGAGGACGTA
TCAAGTTGGCCGACGATTCATACGAGATGTGACAGAAAACCAGGACCTTC
TGTTGAACCCGTCGATACCCGCATTGCCCTCAATTCCTCCGGAGACCCCG
GAACAGCTGATTTTGAATGGTGAGGATTGTATGAGCTTCCACGCGCGCGC
CTCGGAATGTCTTTCTCAGATCAACAATCTCCTCCAATATGGTGCAAGCA
AGTGGGGAGCGACCAGCATACTTGGAGACTTCCAGCAAATGTGCGAGCCC
GCCCGGAGCCGTCTATTACATGCATCGAATCCATATCTGGCAGGTTCTGG
GGCCTATATGGCTGGCTACGCTTCATTGGTGCCTGCAGGAACAGGATACC
TAGGCTTTGACATTGGATGAATGTCGGCTACTTCATTTCTGGACAAACCA
CTCCTCAAAGTCAGTCGACCAGTGGCTGCTTGCTCAAGATGCCGAACAGC
CAAAATCAAATGTGACGGGAAGCTTCCGGCCTGCTCCGCGTGCGAAAGGG
TCGGAAAAGCGAGCACCTGCTCCGGCGCAAGTGACGAATTCGCCAGAGGA
AAGGAAAGAAGCTATGTCGCCTCTTTGGAAGGTTACTGCGAACGACTCAA
AACGAAGATTGACGATCTTCGCCGCCTCAAAACATCATTATCTGTGGACG
AAAGGGGTGTCGCCCATCAAAGCTCGATCACCTCCATCTCCTCGGCAGGT
ACTGTTGCACAGGAAGGTGGCAAAGAAGTGACTGACATCGATGACCTCGT
TGGTGATTTTGGCTTCTTGTCCGTCAATGCGACTTCGAGAGACTTCCATG
GGATTACTTCGAATACGTCTTTCGCCAATCTTCTTCTGTCCCTGTCTCAA
GCTGAGTCGATACCAAGAACGACGGCGCAGTCAATACCGCCACGCCATGA
GATAATGCCCGTGCTACAACACTATTTCGACAACATCTACATACAGCTTC
CATTTTTCGCCGAAACGAGCTTCTGGACATCTGTGGATGCGGTCTACCAA
GCTGGGGGGCGCTTTGCCAAGCCCTTTGACAAGTGGATTGTGCATATGGT
CTTAGCCACTGCGTCTGCGTCTATCTCCCTCGAGATCGGTGATAGAAGTC
ATCACAGAGCGTTGTCTCATGTTTCAATGGCAATGAATCAAGCCGAGGAC
GTCGTCCGTCCCGGTACTATAGCCGGTATCCAGTCAATCCTCCTGCTTGC
CCAATATTCCTTATTCGACCCGCAACACTTTCGCAGCTGGTACTTAGTAG
GGATGGCTGTCAGGGTAATGGTCGATCTAGGCCTACACCAGGACCCGCCT
TTGGATGTTCAGTCAGCCTCGGTGCAGCTGGACCTGCGCCGCCGTGTTTT
CCATTGTGTCTATTGCTTGGACAGCAAGATTGTTCTGTTCCATTGCTGCA
TGCGGTACATCAAAGAACTCTATGAGGTGCTGAAGAACCCTGCCTGGCTG
CCTTTGATGACCTTCCTGGATATTCAGAGGACGTATCAAGTTGGCCGACG
ATTCATACGAGATGTGACAGAAAACCAGGACCTTCTGTTGAACCCGTCGA
TACCCGCATTGCCCTCAATTCCTCCGGAGACCCCGGAACAGCTGATTTTG
AATGGTGAGGATTGTATGAGCTTCCACGCGCGCGCCTCGGAATGTCTTTC
TCAGATCAACAATCTCCTCCAATATGGTGCAAGCAAGTGGGGAGCGACCA
GCATACTTGGAGACTTCCAGCAAATGTGCGAGCCCGCCCGGAGCCGTCTA
TTACATGCATCGAATCCATATCTGGCAGGTTCTGGGGCCTATATGGCTGG
CTACGCTTCATTGGTGCCTGCAGGAACAGGATACCTAGGCTTTGACATTG
GATGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006351	transcription, DNA-templated
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
KYF_002340	KYF_002340	Aspergillus niger KYF3	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KYF_002340-T1.exon1	KYF_002340-T1.exon1	Aspergillus niger KYF3	exon
KYF_002340-T1.exon2	KYF_002340-T1.exon2	Aspergillus niger KYF3	exon
KYF_002340-T1.exon3	KYF_002340-T1.exon3	Aspergillus niger KYF3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KYF_002340-T1.cds	KYF_002340-T1.cds	Aspergillus niger KYF3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
KYF_002340-T1	KYF_002340-T1-protein	Aspergillus niger KYF3	polypeptide

Properties


Property Name	Value
Note	EggNog:ENOG41
DBxref	InterPro:IPR036864
DBxref	InterPro:IPR007219
DBxref	InterPro:IPR001138
DBxref	PFAM:PF00172
DBxref	PFAM:PF04082
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF3	2020-10-09

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ch2	supercontig	ch2:3167135..3169142 +

Main menu

You are here

KYF_002340-T1, KYF_002340-T1 (mRNA) Aspergillus niger KYF3

Main menu

User login

You are here

KYF_002340-T1, KYF_002340-T1 (mRNA) Aspergillus niger KYF3