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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3234808..3235667- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_002367-T1 ID=KYF_002367-T1|Name=KYF_002367-T1|organism=Aspergillus niger KYF3|type=mRNA|length=860bp|location=Sequence derived from alignment at ch2:3234808..3235667- (Aspergillus niger KYF3)
ATGGCCCAGGAAATCCAAAAAGAGAACAATGACCATTTGGTCCAGTCGTC
TGACCCCGAGCATCCCGCCAACTTGATCCCTGATCTCTGTCGCCGGTTCT
ACAATTGGGGCTGGGTCACCGGTACTGGTGGCGGGGTAAGCACTGTTGCA
CCTCCAGGACGATCATGAGTAATCGCTAATCGATTCCTATTTATTTCTGC
ATTAGACTTCCATTCGTCGCGATAATCATATATTCATTGCTCCTTCTGGC
GTGCAGAAGGAGATGATGAAATCCGACAACATCTTTGTCTTGGAATTCCC
TACGCCCAAGTATCCTCCGTCCGATCGCAAATATATTCGCAAGCCGCTCG
ACCTGAAGCCCTCGGCATGCACGCCACTGTTCCTTGCCGCTTTTGAGCGC
GGGGCTGGCTGCTGCATCCACACTCATTCTCAGTGGGCGGTCCTGGTGAC
CCTCCTGGTTGAGCGCGAGAAGGGCCCGAACGCCTGCTTCGAAATTAGCA
ACATTGAACAGATTAAGGGTATTCCCCGTGGAAAGGGCAAGGGCATGATG
GGTTTCTACGATACTCTTCGTATCCCGATTATTGATAACACCGCGTTTGA
GGAAGATCTCACGGGAAGCTTGGAGAAGGCGATGGAGGAGTACCCTGACA
CCTATGCTGTCCTTGTGCGGAGACACGGAATGTAAGTTTCATTTTTTTAA
CCCTTAACTTTCGAGTGACGGCGGGCTTATGTGTGTGTATAGTTATGTGT
GGGGAGACGACGTCGTCAAAGCCAAGACTCAGTGCGAGAGTCTAGACTAC
CTGTTCCAGCTTGCTGTTGAGATGCACAAGCTTGGCCTTCCGTGGGTGAA
AGAAACGTAG back to topCoding sequence (CDS) from alignment at ch2:3234808..3235667- >KYF_002367-T1 ID=KYF_002367-T1|Name=KYF_002367-T1|organism=Aspergillus niger KYF3|type=CDS|length=2187bp|location=Sequence derived from alignment at ch2:3234808..3235667- (Aspergillus niger KYF3)
TTATGTGTGGGGAGACGACGTCGTCAAAGCCAAGACTCAGTGCGAGAGTC
TAGACTACCTGTTCCAGCTTGCTGTTGAGATGCACAAGCTTGGCCTTCCG
TGGGTGAAAGAAACGTAGACTTCCATTCGTCGCGATAATCATATATTCAT
TGCTCCTTCTGGCGTGCAGAAGGAGATGATGAAATCCGACAACATCTTTG
TCTTGGAATTCCCTACGCCCAAGTATCCTCCGTCCGATCGCAAATATATT
CGCAAGCCGCTCGACCTGAAGCCCTCGGCATGCACGCCACTGTTCCTTGC
CGCTTTTGAGCGCGGGGCTGGCTGCTGCATCCACACTCATTCTCAGTGGG
CGGTCCTGGTGACCCTCCTGGTTGAGCGCGAGAAGGGCCCGAACGCCTGC
TTCGAAATTAGCAACATTGAACAGATTAAGGGTATTCCCCGTGGAAAGGG
CAAGGGCATGATGGGTTTCTACGATACTCTTCGTATCCCGATTATTGATA
ACACCGCGTTTGAGGAAGATCTCACGGGAAGCTTGGAGAAGGCGATGGAG
GAGTACCCTGACACCTATGCTGTCCTTGTGCGGAGACACGGAATATGGCC
CAGGAAATCCAAAAAGAGAACAATGACCATTTGGTCCAGTCGTCTGACCC
CGAGCATCCCGCCAACTTGATCCCTGATCTCTGTCGCCGGTTCTACAATT
GGGGCTGGGTCACCGGTACTGGTGGCGGGTTATGTGTGGGGAGACGACGT
CGTCAAAGCCAAGACTCAGTGCGAGAGTCTAGACTACCTGTTCCAGCTTG
CTGTTGAGATGCACAAGCTTGGCCTTCCGTGGGTGAAAGAAACGTAGACT
TCCATTCGTCGCGATAATCATATATTCATTGCTCCTTCTGGCGTGCAGAA
GGAGATGATGAAATCCGACAACATCTTTGTCTTGGAATTCCCTACGCCCA
AGTATCCTCCGTCCGATCGCAAATATATTCGCAAGCCGCTCGACCTGAAG
CCCTCGGCATGCACGCCACTGTTCCTTGCCGCTTTTGAGCGCGGGGCTGG
CTGCTGCATCCACACTCATTCTCAGTGGGCGGTCCTGGTGACCCTCCTGG
TTGAGCGCGAGAAGGGCCCGAACGCCTGCTTCGAAATTAGCAACATTGAA
CAGATTAAGGGTATTCCCCGTGGAAAGGGCAAGGGCATGATGGGTTTCTA
CGATACTCTTCGTATCCCGATTATTGATAACACCGCGTTTGAGGAAGATC
TCACGGGAAGCTTGGAGAAGGCGATGGAGGAGTACCCTGACACCTATGCT
GTCCTTGTGCGGAGACACGGAATATGGCCCAGGAAATCCAAAAAGAGAAC
AATGACCATTTGGTCCAGTCGTCTGACCCCGAGCATCCCGCCAACTTGAT
CCCTGATCTCTGTCGCCGGTTCTACAATTGGGGCTGGGTCACCGGTACTG
GTGGCGGGTTATGTGTGGGGAGACGACGTCGTCAAAGCCAAGACTCAGTG
CGAGAGTCTAGACTACCTGTTCCAGCTTGCTGTTGAGATGCACAAGCTTG
GCCTTCCGTGGGTGAAAGAAACGTAGACTTCCATTCGTCGCGATAATCAT
ATATTCATTGCTCCTTCTGGCGTGCAGAAGGAGATGATGAAATCCGACAA
CATCTTTGTCTTGGAATTCCCTACGCCCAAGTATCCTCCGTCCGATCGCA
AATATATTCGCAAGCCGCTCGACCTGAAGCCCTCGGCATGCACGCCACTG
TTCCTTGCCGCTTTTGAGCGCGGGGCTGGCTGCTGCATCCACACTCATTC
TCAGTGGGCGGTCCTGGTGACCCTCCTGGTTGAGCGCGAGAAGGGCCCGA
ACGCCTGCTTCGAAATTAGCAACATTGAACAGATTAAGGGTATTCCCCGT
GGAAAGGGCAAGGGCATGATGGGTTTCTACGATACTCTTCGTATCCCGAT
TATTGATAACACCGCGTTTGAGGAAGATCTCACGGGAAGCTTGGAGAAGG
CGATGGAGGAGTACCCTGACACCTATGCTGTCCTTGTGCGGAGACACGGA
ATATGGCCCAGGAAATCCAAAAAGAGAACAATGACCATTTGGTCCAGTCG
TCTGACCCCGAGCATCCCGCCAACTTGATCCCTGATCTCTGTCGCCGGTT
CTACAATTGGGGCTGGGTCACCGGTACTGGTGGCGGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019509 | L-methionine salvage from methylthioadenosine |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027514 |
| DBxref | InterPro:IPR036409 |
| DBxref | InterPro:IPR017714 |
| DBxref | InterPro:IPR001303 |
| DBxref | PFAM:PF00596 |
| Product | Methylthioribulose-1-phosphate dehydratase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3234808..3235667 - |
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