|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3296789..3297557+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_002388-T1 ID=KYF_002388-T1|Name=KYF_002388-T1|organism=Aspergillus niger KYF3|type=mRNA|length=769bp|location=Sequence derived from alignment at ch2:3296789..3297557+ (Aspergillus niger KYF3)
ATGGAACAACAACCGCTCCAGCCGCAGCAGGGCGAACTGAACTGGCGCCT
CAGTGCCCATCCGATTACTCTCCTGTTCTTCCTGGGCTTTCGCATCGGCG
CCCTACTGATGTACCTCTTCGGCGTGCTCTTTATCAAGAACTTGTGCGTA
AAACACCTTTCAAACTCAACTTCAGGATCATAGCTCCCTCAATCTCCAAA
CCCGGAACCTCCCAGAGCTACCCTATCTAGATCCGAGCAAACAACCAAGC
TAACCACTGCAACCAGCGTCCTCGTCTTCATCATCACCCTCCTCATCCTT
TCCGCCGATTTCTACTACCTCAAAAACATCGCCGGTCGCCGACTGGTCGG
TCTCCGCTGGTGGAACGAAGTCAACACTTCCTCCGGCGACTCTACTTGGG
TCTTCGAGTCCTCCGATCCCACTACCCGCACCATCACCGCCACGGACAAA
CGCTTCTTCTGGTTGAGTCTGTACGTGACGCCTGCACTATGGATTGGCCT
CGCCATTTTGGCCATTATTCGTTTGAGCAGTGTGATTTGGTTGAGTCTTG
TTGGTGAGTTTATCCTTGCACTCTTTCTCCCAGCAGGTATATAAGAAGCG
TGGATGCTAATTGTATACAGCCATTGCCCTCGCCTTGACCATCACCAACA
CTGTTGCGTTCTCCCGGTGCGATCGCTTCAGTCAGGCTTCCACCTTCGCG
AATAGTGCGCTTTCGGGTGGAGTTATGAGTAACCTTGCGGGTGGCCTGCT
GGGCAGGCTTTTCAAGTAG back to topCoding sequence (CDS) from alignment at ch2:3296789..3297557+ >KYF_002388-T1 ID=KYF_002388-T1|Name=KYF_002388-T1|organism=Aspergillus niger KYF3|type=CDS|length=1737bp|location=Sequence derived from alignment at ch2:3296789..3297557+ (Aspergillus niger KYF3)
ATGGAACAACAACCGCTCCAGCCGCAGCAGGGCGAACTGAACTGGCGCCT
CAGTGCCCATCCGATTACTCTCCTGTTCTTCCTGGGCTTTCGCATCGGCG
CCCTACTGATGTACCTCTTCGGCGTGCTCTTTATCAAGAACTTCGTCCTC
GTCTTCATCATCACCCTCCTCATCCTTTCCGCCGATTTCTACTACCTCAA
AAACATCGCCGGTCGCCGACTGGTCGGTCTCCGCTGGTGGAACGAAGTCA
ACACTTCCTCCGGCGACTCTACTTGGGTCTTCGAGTCCTCCGATCCCACT
ACCCGCACCATCACCGCCACGGACAAACGCTTCTTCTGGTTGAGTCTGTA
CGTGACGCCTGCACTATGGATTGGCCTCGCCATTTTGGCCATTATTCGTT
TGAGCAGTGTGATTTGGTTGAGTCTTGTTGCCATTGCCCTCGCCTTGACC
ATCACCAACACTGTTGCGTTCTCCCGGTGCGATCGCTTCAGTCAGGCTTC
CACCTTCGCGAATAGTGCGCTTTCGGGTGGAGTTATGAGTAACCTTGCGG
GTGGCCTGCTGGGCAGGCTTTTCAAGTAGATGGAACAACAACCGCTCCAG
CCGCAGCAGGGCGAACTGAACTGGCGCCTCAGTGCCCATCCGATTACTCT
CCTGTTCTTCCTGGGCTTTCGCATCGGCGCCCTACTGATGTACCTCTTCG
GCGTGCTCTTTATCAAGAACTTCGTCCTCGTCTTCATCATCACCCTCCTC
ATCCTTTCCGCCGATTTCTACTACCTCAAAAACATCGCCGGTCGCCGACT
GGTCGGTCTCCGCTGGTGGAACGAAGTCAACACTTCCTCCGGCGACTCTA
CTTGGGTCTTCGAGTCCTCCGATCCCACTACCCGCACCATCACCGCCACG
GACAAACGCTTCTTCTGGTTGAGTCTGTACGTGACGCCTGCACTATGGAT
TGGCCTCGCCATTTTGGCCATTATTCGTTTGAGCAGTGTGATTTGGTTGA
GTCTTGTTGCCATTGCCCTCGCCTTGACCATCACCAACACTGTTGCGTTC
TCCCGGTGCGATCGCTTCAGTCAGGCTTCCACCTTCGCGAATAGTGCGCT
TTCGGGTGGAGTTATGAGTAACCTTGCGGGTGGCCTGCTGGGCAGGCTTT
TCAAGTAGATGGAACAACAACCGCTCCAGCCGCAGCAGGGCGAACTGAAC
TGGCGCCTCAGTGCCCATCCGATTACTCTCCTGTTCTTCCTGGGCTTTCG
CATCGGCGCCCTACTGATGTACCTCTTCGGCGTGCTCTTTATCAAGAACT
TCGTCCTCGTCTTCATCATCACCCTCCTCATCCTTTCCGCCGATTTCTAC
TACCTCAAAAACATCGCCGGTCGCCGACTGGTCGGTCTCCGCTGGTGGAA
CGAAGTCAACACTTCCTCCGGCGACTCTACTTGGGTCTTCGAGTCCTCCG
ATCCCACTACCCGCACCATCACCGCCACGGACAAACGCTTCTTCTGGTTG
AGTCTGTACGTGACGCCTGCACTATGGATTGGCCTCGCCATTTTGGCCAT
TATTCGTTTGAGCAGTGTGATTTGGTTGAGTCTTGTTGCCATTGCCCTCG
CCTTGACCATCACCAACACTGTTGCGTTCTCCCGGTGCGATCGCTTCAGT
CAGGCTTCCACCTTCGCGAATAGTGCGCTTTCGGGTGGAGTTATGAGTAA
CCTTGCGGGTGGCCTGCTGGGCAGGCTTTTCAAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR008564 |
| DBxref | PFAM:PF05832 |
| Product | Golgi apparatus membrane protein tvp23 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3296789..3297557 + |
|
