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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3301704..3302804+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_002390-T1 ID=KYF_002390-T1|Name=KYF_002390-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1101bp|location=Sequence derived from alignment at ch2:3301704..3302804+ (Aspergillus niger KYF3)
ATGTCACAAAACACTACGACCACAGTACAGGAGCTACGCCTGGGCACCCG
CAATTCCAAACTGGCACTAGTACAAGCGGAGCATGTTTCCAAGGAGCTGA
CCAGTGCTCACCCCGGAGTCCAGTTTCCCTGGCAAACGGTGGTGGTGCGC
GGCGATGCCGACAAAAGTAGCCCTTTCCTGAAATTTGCAGGGCCATCCGA
CGCAGCAAAGAACATCTGGACCGAAGAGATGGAAACCAAGCTGTGCGCAG
GAGAGCTGGACCTCCTCGTGCATTGCCTCAAAGATATGCCGACGCGTCTA
CCAGAAACCTGCACACTAGGGGCCATTGTTTATCGGGAAGATCCCACTGA
TGCGTTGGTGATAAAGGAGGGGCTGCGGTCGCAGTATACGGATCTGAGTC
AACTGCCCCCCGGTTCTGTGGTGGGCACTAGTTCCACTAGACGGAAAGCC
CTACTTCGATACAGATACCCGCATTTGAAAGTGGAGGAATGCCGCGGGAA
CCTGTAAGAAGACTGCCCCTTTTTGTCACTGAGAGTTGACTCTTTTCTGA
CTTGACATGGCAGCGGAACACGGCTGAAAAAGCTAGATGACCCAGAAGGT
CCATTTTCGGCAATCATCCTGGCCACGGCCGGTATGGTCCGCATCAATCT
GGAAGATCGCATTACGAAACGCTTGCCTCCCTCGGAGTTCCCGTACGCTG
TCGGTCAGGGCGCCCTGGGCATTGAAATCCGCAAGGAGGACGCCCAGACA
AAGACCATGGTTCGAAAAATCGAAGACCTGGTTACCCGTCGGATCTGTCT
GGCAGAGCGGTCACTGCTACGCACTCTTCAGGGCGGCTGCTCGTCTCCAG
TCGCAGTACATTGCACTGTTGAGCAGGCACCAACAGCTTCCTCGCCAGCT
CAATTGCGACTAGATGGTACTATAATTCATCCCCACGGGACAACTTTGCT
ATCTGAACGGACGACAGCGGAAGTGGGAACGGACGAGGATGCCGAGGCGT
TGGGTGCTACGGTCGCTCAGCAATTGTTGAAGAATGGCGGACAAGCATTG
CTGGAAGAGATTCGTCTGTTACAAGAGACCATTGCGACAGATGCAAAATA
G back to topCoding sequence (CDS) from alignment at ch2:3301704..3302804+ >KYF_002390-T1 ID=KYF_002390-T1|Name=KYF_002390-T1|organism=Aspergillus niger KYF3|type=CDS|length=2970bp|location=Sequence derived from alignment at ch2:3301704..3302804+ (Aspergillus niger KYF3)
ATGTCACAAAACACTACGACCACAGTACAGGAGCTACGCCTGGGCACCCG
CAATTCCAAACTGGCACTAGTACAAGCGGAGCATGTTTCCAAGGAGCTGA
CCAGTGCTCACCCCGGAGTCCAGTTTCCCTGGCAAACGGTGGTGGTGCGC
GGCGATGCCGACAAAAGTAGCCCTTTCCTGAAATTTGCAGGGCCATCCGA
CGCAGCAAAGAACATCTGGACCGAAGAGATGGAAACCAAGCTGTGCGCAG
GAGAGCTGGACCTCCTCGTGCATTGCCTCAAAGATATGCCGACGCGTCTA
CCAGAAACCTGCACACTAGGGGCCATTGTTTATCGGGAAGATCCCACTGA
TGCGTTGGTGATAAAGGAGGGGCTGCGGTCGCAGTATACGGATCTGAGTC
AACTGCCCCCCGGTTCTGTGGTGGGCACTAGTTCCACTAGACGGAAAGCC
CTACTTCGATACAGATACCCGCATTTGAAAGTGGAGGAATGCCGCGGGAA
CCTCGGAACACGGCTGAAAAAGCTAGATGACCCAGAAGGTCCATTTTCGG
CAATCATCCTGGCCACGGCCGGTATGGTCCGCATCAATCTGGAAGATCGC
ATTACGAAACGCTTGCCTCCCTCGGAGTTCCCGTACGCTGTCGGTCAGGG
CGCCCTGGGCATTGAAATCCGCAAGGAGGACGCCCAGACAAAGACCATGG
TTCGAAAAATCGAAGACCTGGTTACCCGTCGGATCTGTCTGGCAGAGCGG
TCACTGCTACGCACTCTTCAGGGCGGCTGCTCGTCTCCAGTCGCAGTACA
TTGCACTGTTGAGCAGGCACCAACAGCTTCCTCGCCAGCTCAATTGCGAC
TAGATGCGGAAGTGGGAACGGACGAGGATGCCGAGGCGTTGGGTGCTACG
GTCGCTCAGCAATTGTTGAAGAATGGCGGACAAGCATTGCTGGAAGAGAT
TCGTCTGTTACAAGAGACCATTGCGACAGATGCAAAATAGATGTCACAAA
ACACTACGACCACAGTACAGGAGCTACGCCTGGGCACCCGCAATTCCAAA
CTGGCACTAGTACAAGCGGAGCATGTTTCCAAGGAGCTGACCAGTGCTCA
CCCCGGAGTCCAGTTTCCCTGGCAAACGGTGGTGGTGCGCGGCGATGCCG
ACAAAAGTAGCCCTTTCCTGAAATTTGCAGGGCCATCCGACGCAGCAAAG
AACATCTGGACCGAAGAGATGGAAACCAAGCTGTGCGCAGGAGAGCTGGA
CCTCCTCGTGCATTGCCTCAAAGATATGCCGACGCGTCTACCAGAAACCT
GCACACTAGGGGCCATTGTTTATCGGGAAGATCCCACTGATGCGTTGGTG
ATAAAGGAGGGGCTGCGGTCGCAGTATACGGATCTGAGTCAACTGCCCCC
CGGTTCTGTGGTGGGCACTAGTTCCACTAGACGGAAAGCCCTACTTCGAT
ACAGATACCCGCATTTGAAAGTGGAGGAATGCCGCGGGAACCTCGGAACA
CGGCTGAAAAAGCTAGATGACCCAGAAGGTCCATTTTCGGCAATCATCCT
GGCCACGGCCGGTATGGTCCGCATCAATCTGGAAGATCGCATTACGAAAC
GCTTGCCTCCCTCGGAGTTCCCGTACGCTGTCGGTCAGGGCGCCCTGGGC
ATTGAAATCCGCAAGGAGGACGCCCAGACAAAGACCATGGTTCGAAAAAT
CGAAGACCTGGTTACCCGTCGGATCTGTCTGGCAGAGCGGTCACTGCTAC
GCACTCTTCAGGGCGGCTGCTCGTCTCCAGTCGCAGTACATTGCACTGTT
GAGCAGGCACCAACAGCTTCCTCGCCAGCTCAATTGCGACTAGATGCGGA
AGTGGGAACGGACGAGGATGCCGAGGCGTTGGGTGCTACGGTCGCTCAGC
AATTGTTGAAGAATGGCGGACAAGCATTGCTGGAAGAGATTCGTCTGTTA
CAAGAGACCATTGCGACAGATGCAAAATAGATGTCACAAAACACTACGAC
CACAGTACAGGAGCTACGCCTGGGCACCCGCAATTCCAAACTGGCACTAG
TACAAGCGGAGCATGTTTCCAAGGAGCTGACCAGTGCTCACCCCGGAGTC
CAGTTTCCCTGGCAAACGGTGGTGGTGCGCGGCGATGCCGACAAAAGTAG
CCCTTTCCTGAAATTTGCAGGGCCATCCGACGCAGCAAAGAACATCTGGA
CCGAAGAGATGGAAACCAAGCTGTGCGCAGGAGAGCTGGACCTCCTCGTG
CATTGCCTCAAAGATATGCCGACGCGTCTACCAGAAACCTGCACACTAGG
GGCCATTGTTTATCGGGAAGATCCCACTGATGCGTTGGTGATAAAGGAGG
GGCTGCGGTCGCAGTATACGGATCTGAGTCAACTGCCCCCCGGTTCTGTG
GTGGGCACTAGTTCCACTAGACGGAAAGCCCTACTTCGATACAGATACCC
GCATTTGAAAGTGGAGGAATGCCGCGGGAACCTCGGAACACGGCTGAAAA
AGCTAGATGACCCAGAAGGTCCATTTTCGGCAATCATCCTGGCCACGGCC
GGTATGGTCCGCATCAATCTGGAAGATCGCATTACGAAACGCTTGCCTCC
CTCGGAGTTCCCGTACGCTGTCGGTCAGGGCGCCCTGGGCATTGAAATCC
GCAAGGAGGACGCCCAGACAAAGACCATGGTTCGAAAAATCGAAGACCTG
GTTACCCGTCGGATCTGTCTGGCAGAGCGGTCACTGCTACGCACTCTTCA
GGGCGGCTGCTCGTCTCCAGTCGCAGTACATTGCACTGTTGAGCAGGCAC
CAACAGCTTCCTCGCCAGCTCAATTGCGACTAGATGCGGAAGTGGGAACG
GACGAGGATGCCGAGGCGTTGGGTGCTACGGTCGCTCAGCAATTGTTGAA
GAATGGCGGACAAGCATTGCTGGAAGAGATTCGTCTGTTACAAGAGACCA
TTGCGACAGATGCAAAATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004418 | hydroxymethylbilane synthase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0018160 | peptidyl-pyrromethane cofactor linkage |
| GO:0033014 | tetrapyrrole biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022419 |
| DBxref | InterPro:IPR022418 |
| DBxref | InterPro:IPR022417 |
| DBxref | InterPro:IPR036803 |
| DBxref | InterPro:IPR000860 |
| DBxref | PFAM:PF03900 |
| DBxref | PFAM:PF01379 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3301704..3302804 + |
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